Click here to switch to the map view.

The map label for this gene is lemA [H]

Identifier: 54020153

GI number: 54020153

Start: 404348

End: 404995

Strand: Direct

Name: lemA [H]

Synonym: mhp347

Alternate gene names: 54020153

Gene position: 404348-404995 (Clockwise)

Preceding gene: 54020152

Following gene: 54020154

Centisome position: 45.29

GC content: 31.48

Gene sequence:

>648_bases
ATGTCAAATTTATACAACCCTAAAAATTCTGCAAATATCGAAGGATTTGAACCTCGAATTGATAATGACTCCAAAAAACC
GGTTGTTTCAACAGCCGCTAAAGTTGCATTTTGAACTTTGGGGACTTTGTTTTTATTTATTGCTCCAATTTATTACATTT
CGCAAAAAAATAATTTTATGCGACATCAGAATTTAATCAATGAATCAGCTGGTACAATCGAGGTTCAACTTGAGCAACGT
AGCGCAACTTTATTAAAATTAGCTGACCAAGTTCGTTCATATCGTGAATATGAAAAATCAATTTTAAGCGACATTACAAG
ATTAAGAAGTTTAAAGTCAAACATAGAAAATGCTCAAGAAATTGAAGATTTAAACAATTCATTATTTGGCAGACTAATTG
CAGTAAGTGAAAATTACCCAGAATTGCAAGCATCAAAAATTTATCAAGAATTAATCCAACAAACAGCCTATTTAGAAAGA
GAATTGGCGGCTGCAAGACGACTTTATAATAGCAATGTTAATTCTTTTAATACCCAAATTTTTATCTTTCCTTCTTCAAT
TGTTGCATCTTCGATGAATTTGACAACCTACCCAATGTTTAGCACAAGCAACCAAAATCGCCAAGATGTATCATTCAAAG
ATTTTTAA

Upstream 100 bases:

>100_bases
TCTTATTTACGTTACTTTGTATTTGGATTAGTTAAAAACATAATATTTTCAAAAAAAATATGGTATAATTTTTAATTTAA
TTAATATTTAAAGGAAAAAA

Downstream 100 bases:

>100_bases
TCTCTTATATTAAAAACAGACATAATTTCTCAATAAATTTGCAATTTAAACAATAAAAATTTTAGTAATCAAGGACTAAA
ATCCCACAACAATAATTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF219 [H]

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MSNLYNPKNSANIEGFEPRIDNDSKKPVVSTAAKVAFWTLGTLFLFIAPIYYISQKNNFMRHQNLINESAGTIEVQLEQR
SATLLKLADQVRSYREYEKSILSDITRLRSLKSNIENAQEIEDLNNSLFGRLIAVSENYPELQASKIYQELIQQTAYLER
ELAAARRLYNSNVNSFNTQIFIFPSSIVASSMNLTTYPMFSTSNQNRQDVSFKDF

Sequences:

>Translated_215_residues
MSNLYNPKNSANIEGFEPRIDNDSKKPVVSTAAKVAF*TLGTLFLFIAPIYYISQKNNFMRHQNLINESAGTIEVQLEQR
SATLLKLADQVRSYREYEKSILSDITRLRSLKSNIENAQEIEDLNNSLFGRLIAVSENYPELQASKIYQELIQQTAYLER
ELAAARRLYNSNVNSFNTQIFIFPSSIVASSMNLTTYPMFSTSNQNRQDVSFKDF
>Mature_214_residues
SNLYNPKNSANIEGFEPRIDNDSKKPVVSTAAKVAF*TLGTLFLFIAPIYYISQKNNFMRHQNLINESAGTIEVQLEQRS
ATLLKLADQVRSYREYEKSILSDITRLRSLKSNIENAQEIEDLNNSLFGRLIAVSENYPELQASKIYQELIQQTAYLERE
LAAARRLYNSNVNSFNTQIFIFPSSIVASSMNLTTYPMFSTSNQNRQDVSFKDF

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 24460; Mature: 24329

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLYNPKNSANIEGFEPRIDNDSKKPVVSTAAKVAFTLGTLFLFIAPIYYISQKNNFMR
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
HQNLINESAGTIEVQLEQRSATLLKLADQVRSYREYEKSILSDITRLRSLKSNIENAQEI
HHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDLNNSLFGRLIAVSENYPELQASKIYQELIQQTAYLERELAAARRLYNSNVNSFNTQIF
HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
IFPSSIVASSMNLTTYPMFSTSNQNRQDVSFKDF
EEEHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNLYNPKNSANIEGFEPRIDNDSKKPVVSTAAKVAFTLGTLFLFIAPIYYISQKNNFMR
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
HQNLINESAGTIEVQLEQRSATLLKLADQVRSYREYEKSILSDITRLRSLKSNIENAQEI
HHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDLNNSLFGRLIAVSENYPELQASKIYQELIQQTAYLERELAAARRLYNSNVNSFNTQIF
HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
IFPSSIVASSMNLTTYPMFSTSNQNRQDVSFKDF
EEEHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7521872 [H]