Definition | Mycoplasma hyopneumoniae 232, complete genome. |
---|---|
Accession | NC_006360 |
Length | 892,758 |
Click here to switch to the map view.
The map label for this gene is 54020152
Identifier: 54020152
GI number: 54020152
Start: 403196
End: 404278
Strand: Direct
Name: 54020152
Synonym: mhp346
Alternate gene names: NA
Gene position: 403196-404278 (Clockwise)
Preceding gene: 54020151
Following gene: 54020153
Centisome position: 45.16
GC content: 28.99
Gene sequence:
>1083_bases TTGAACCAAGGAGTAAAAATGAAAATAATAAATGATTATTTTAAATTTGAAGACTATAAAAACAAGGCAAAAGCGGAATT TCACCCTAAATTAGATGAAATTATCAAGAAAAAACATTCAAAGTCTCTTGAAAAAGTTGCTGGATTACAAAATGAGGCAA AAAAACTTAATATTACCTCGTCAATTTCATTCTTTTTAACTATGATTGTTATTCTTGTTGCTACCAATACCCAACTAGGA TATACTAGCATCATTTTTGCCATTATTCCCGGAATAATTGCAATTGTTTCTACTTTTTACTTAGGATTCAAAAAAAAGGA AATTAGAAAAATCACCGATGAAATTTCAAAAGACGTCCTAGTTAATTTTAGACCAGAAGTTGCTTATAAAGCTGCCTTTT CAATTTTAGATAAAGGAATGGATTATTTAGGTTTTAATGACCAACCTAGCAACAAAATTCAAATTTCAAAAAACGAAATT ACTAACCTTACTCCCGTAGAAATAATTGGCTCATCAAGGGCTTGAATTAGTCAAGTTAGACCTCTGAAGGAATTATTAAT TGATGAAAAATTCCATGTTAGCTTTACAAATGTCCACTGACAATGAAAAGAAACAAGAAAAAATGAAACTGTGACAAGAG AAAGTTTTACTGGAATTTTAAAAATTGATACTTCAATTTTAGGTGAAAAGGCATTTGATTTTAAACTTTTAAAACCAAGC AGCTGATTTTTTCAAAAAAACAAAGTCAAACTTGAAAACGAGGAATTTAACCAGGTTTTTAGTCCAGAATCAAATGATAG ATTGAAAATCAGAAAAATGTATACACCCCTTGCAATGGAACTTTCGCTAAAAAGATATTTTGACCGTGATGGCGTTAAAG TTTTGGATGTTAGCATTGAATCTTTTCAAAATGCGATCTATTTTACTTACAAATGCGACTGAAATTTTATGTATCTTGAT TTTCCAACATCAATAAAAAGCCCTGATGACTTTATTAATCATATTTTCAACGATTTTTTGATTGACACTTACAGTTTGTA TTATCTTTTGTGTCTTATTTACGTTACTTTGTATTTGGATTAG
Upstream 100 bases:
>100_bases AATTTTTTCAACTAAATTAGCCACTTTTTAGCTATTTTTATTGGAAAATAACTAAAAACTGGATTAAAAAAGAGTATTTT TATAATAATTCCTTTTAAAA
Downstream 100 bases:
>100_bases TTAAAAACATAATATTTTCAAAAAAAATATGGTATAATTTTTAATTTAATTAATATTTAAAGGAAAAAAATGTCAAATTT ATACAACCCTAAAAATTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MNQGVKMKIINDYFKFEDYKNKAKAEFHPKLDEIIKKKHSKSLEKVAGLQNEAKKLNITSSISFFLTMIVILVATNTQLG YTSIIFAIIPGIIAIVSTFYLGFKKKEIRKITDEISKDVLVNFRPEVAYKAAFSILDKGMDYLGFNDQPSNKIQISKNEI TNLTPVEIIGSSRAWISQVRPLKELLIDEKFHVSFTNVHWQWKETRKNETVTRESFTGILKIDTSILGEKAFDFKLLKPS SWFFQKNKVKLENEEFNQVFSPESNDRLKIRKMYTPLAMELSLKRYFDRDGVKVLDVSIESFQNAIYFTYKCDWNFMYLD FPTSIKSPDDFINHIFNDFLIDTYSLYYLLCLIYVTLYLD
Sequences:
>Translated_360_residues MNQGVKMKIINDYFKFEDYKNKAKAEFHPKLDEIIKKKHSKSLEKVAGLQNEAKKLNITSSISFFLTMIVILVATNTQLG YTSIIFAIIPGIIAIVSTFYLGFKKKEIRKITDEISKDVLVNFRPEVAYKAAFSILDKGMDYLGFNDQPSNKIQISKNEI TNLTPVEIIGSSRA*ISQVRPLKELLIDEKFHVSFTNVH*Q*KETRKNETVTRESFTGILKIDTSILGEKAFDFKLLKPS S*FFQKNKVKLENEEFNQVFSPESNDRLKIRKMYTPLAMELSLKRYFDRDGVKVLDVSIESFQNAIYFTYKCD*NFMYLD FPTSIKSPDDFINHIFNDFLIDTYSLYYLLCLIYVTLYLD >Mature_360_residues MNQGVKMKIINDYFKFEDYKNKAKAEFHPKLDEIIKKKHSKSLEKVAGLQNEAKKLNITSSISFFLTMIVILVATNTQLG YTSIIFAIIPGIIAIVSTFYLGFKKKEIRKITDEISKDVLVNFRPEVAYKAAFSILDKGMDYLGFNDQPSNKIQISKNEI TNLTPVEIIGSSRA*ISQVRPLKELLIDEKFHVSFTNVH*Q*KETRKNETVTRESFTGILKIDTSILGEKAFDFKLLKPS S*FFQKNKVKLENEEFNQVFSPESNDRLKIRKMYTPLAMELSLKRYFDRDGVKVLDVSIESFQNAIYFTYKCD*NFMYLD FPTSIKSPDDFINHIFNDFLIDTYSLYYLLCLIYVTLYLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41078; Mature: 41078
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQGVKMKIINDYFKFEDYKNKAKAEFHPKLDEIIKKKHSKSLEKVAGLQNEAKKLNITS CCCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHEECHH SISFFLTMIVILVATNTQLGYTSIIFAIIPGIIAIVSTFYLGFKKKEIRKITDEISKDVL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHE VNFRPEVAYKAAFSILDKGMDYLGFNDQPSNKIQISKNEITNLTPVEIIGSSRAISQVRP EECCCHHHHHHHHHHHHCCCHHCCCCCCCCCEEEEEHHHCCCCCHHHEECCCHHHHHHHH LKELLIDEKFHVSFTNVHQKETRKNETVTRESFTGILKIDTSILGEKAFDFKLLKPSSFF HHHHHCCCCCEEEEHHHHHHHHHHHCCCHHHHCCEEEEECHHHHCCCCCCEEEECCHHHH QKNKVKLENEEFNQVFSPESNDRLKIRKMYTPLAMELSLKRYFDRDGVKVLDVSIESFQN HCCCCEECCHHHHHHCCCCCCCCEEEEEHHCCHHHHHHHHHHHCCCCCEEEEEEHHHHCC AIYFTYKCDNFMYLDFPTSIKSPDDFINHIFNDFLIDTYSLYYLLCLIYVTLYLD EEEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNQGVKMKIINDYFKFEDYKNKAKAEFHPKLDEIIKKKHSKSLEKVAGLQNEAKKLNITS CCCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHEECHH SISFFLTMIVILVATNTQLGYTSIIFAIIPGIIAIVSTFYLGFKKKEIRKITDEISKDVL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHE VNFRPEVAYKAAFSILDKGMDYLGFNDQPSNKIQISKNEITNLTPVEIIGSSRAISQVRP EECCCHHHHHHHHHHHHCCCHHCCCCCCCCCEEEEEHHHCCCCCHHHEECCCHHHHHHHH LKELLIDEKFHVSFTNVHQKETRKNETVTRESFTGILKIDTSILGEKAFDFKLLKPSSFF HHHHHCCCCCEEEEHHHHHHHHHHHCCCHHHHCCEEEEECHHHHCCCCCCEEEECCHHHH QKNKVKLENEEFNQVFSPESNDRLKIRKMYTPLAMELSLKRYFDRDGVKVLDVSIESFQN HCCCCEECCHHHHHHCCCCCCCCEEEEEHHCCHHHHHHHHHHHCCCCCEEEEEEHHHHCC AIYFTYKCDNFMYLDFPTSIKSPDDFINHIFNDFLIDTYSLYYLLCLIYVTLYLD EEEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA