Definition | Mycoplasma hyopneumoniae 232, complete genome. |
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Accession | NC_006360 |
Length | 892,758 |
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The map label for this gene is 54020147
Identifier: 54020147
GI number: 54020147
Start: 386828
End: 389239
Strand: Direct
Name: 54020147
Synonym: mhp331
Alternate gene names: NA
Gene position: 386828-389239 (Clockwise)
Preceding gene: 54020146
Following gene: 54020148
Centisome position: 43.33
GC content: 25.79
Gene sequence:
>2412_bases ATGGAATTAACGCAATCTCAATCTAAAGCGGTTGAACAATTAGTTGAAAAAACAACTTTATATCTGACTAGTAGTGAAGA AATTGAGCCAAAATTAGAAAATGATAAAAACCAAACAAATCCAGCAAAACTAAAAAATGCAATTTATTTTAAAGCGCCGA CAGGATCGGGAAAAACTTTCATGATTCTAAACTATATTGATAAATTAATTGAATGAAATAAAGCCAAAGTTGGTAAAGAA TTAGTTTTTGTAATTGTAACATTATCAAGTGCTGAATTACCCAAGCAAATGGAAGAAAGTTTTAATGAATATAAAATTTT TATAAAAAATACAAATTTGAATATAGAGAGAATTGAAAGTCCTTCAAACTTGAAAAGAACGGCAAAAGTTGATAAAAACT ATGAATTTTTTGCCAAACCTGATTCAGTTTTTATTATGGGTGGCGCATCTTTTAAATCAAATTCTATTTTACGTGAACAA GGATCAATTGAAGCATTTTTGTCTGAAATTAAACGAAAAGGGCAAATTCTTATTTATATAAGAGATGAAGCTCATATTGG TTCTGATATTAAAATTAATTCAAAAGACAAAACTTTTGAAGAAAAAATGCAACTAAATGCATCATTTATATTAAAAATGA CAGCAACTCCAAAAACTGATTTGGAATTAGTTCATCTATCTGAAAAAGATTTAAGTCAAGATGATATTCAACTTTTAAAA ACTATAAAACGTCATAATCCTAACTTAGGAACAGGTGAAGATTATGATGATGAAGAAATTTTGGAAATAGCTTGTAAAAA ATTTAACGAAATTAAAAAACAATATAATGATAATATTAAAGAGCCTGGTTTAGTCGGTATTAACCCTGCAATGCTAATTC AAATTGATAATAGTAGTGAAAAGGATGCCCAAAAAGCGCAAAAATTTGATGAAAATATTGAAAAAATAATTAAAATACTC GAAAAGCATGATCTTAGTTGGGTCAAATATTTTGACCAAAATAAAAAAGAAAGTAATTTGCGCCAAAAATCTAATTTCAC ATTACGTGATATTTCTAGAAATATGTCTTCAGTTGATGTAATAATTTTTAAAATTGGCCCTGCAACAGGATGAAATATTC CAAGAGCATGCATGTTAGTCCAACTTAGAAATATTTCATCTTCTAATTTAAGTATTCAAACAATTGGTAGAATAAAAAGA AATCCTTGCCCTATGTATACTTTAAAAGATAATTCCATTGCTCGTAAATATTTTATTTATAGTAATGTTGACCCTGAGAG AAAAAATGTGCTTAAACTTTATTTGAAGGAAAAATATAAATATGACAAATTTATATGAGGCCAAATCCAAATTCCCGGAA TGCCTGACGAAACTAGAAGTAAAATAATTAATTATAAACAATATGAAAACGAATTTGAACATAAATTTAACGATAAGAAG CAGAATCAGGTTAAAGAAATTTTTAAAAACGATTTGAGAAAATATGAAGACGACTATAAGGCCAATAAATTTATTTCTAT TGATACTGAAAAATATGGTTCAGCAAGATTAATTAAATCAAAAATTTCCAACATTATTGAATTAGAATTAGCAATTATTA GACTTAAAAACAATTTAAAAAAGTATTTTACTTCCAAAATTGAAGACTTTTTTGCTAAAATAAAACAAGATTTTTTATCA GATATAAAAACAAATAAACAAATTTTAGATTTAATTATTTTGTTAAAATACGGGCCAGAACTTGCTAAAATTTATAAAAA AACAATTAAAGACCAAGTCAAAAACGCTCAGTATAAACTTTTTGAAGAATGTTTACCTAAAGAAATTGAATTTAATAGTG CTGAAAATGATAAATTGGTGAAAACTAATGATTCTTCTTTTGCTTATAAAAAAATTGATGACAAAACACCAGAAGATAAT CTTCCATTAGATTCAGAAGCAGAACTGTTTTTTGCAAAAGAATTAATAAAAATTAGTAAAGCAAAGCAAAATATTCGTTT TTGAGCTAAAAACCCAGTCTATACTAAATTAGGTTTTCAATACATTAACGGAAATGAAATTGCAAAATCATATCCTGATT TTTTGGTTAGCAAAGATGGAAATTATTTTTATTTTGAGATCAAACATTATAAAGATTTTGATCCTGAAAAAACTCAATTA TTAATAAGGGGTTATAATCAATATTTCAAAGAAAATCAAATAAATCAAAAAAATTTAACCTTAGCTGTTTGTTGAGTTGT TCCTAAATACGGAGACCTTTATTTTGCTGGATCTTCTAATTTAGAGCAAATTCGAGATAAAATTGATTTTAATAAAAAAA CAAATAGCGATATTAACGATATTAGCGATAAAGAATTTGAAGAAAAAAGAAAAAAAATTGCCCCAATGCTTTTAACCGAC ATTATAAATTAA
Upstream 100 bases:
>100_bases AAAGTCGACTTAAATCATATAGATACTAAAAATACCAGGTATATTGAAATTTTAAATCATCTTTTAGCACTAAAACCACA AGAAAAGGATTTATAAAATT
Downstream 100 bases:
>100_bases ATAATAAATAATCTTTCTTAAAGATCAAAAAATCTATGATTCATTCATAGGTAATTTAGTATATTAATTTATAGTTTGTT CAATCGTTTTTATTATAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 803; Mature: 803
Protein sequence:
>803_residues MELTQSQSKAVEQLVEKTTLYLTSSEEIEPKLENDKNQTNPAKLKNAIYFKAPTGSGKTFMILNYIDKLIEWNKAKVGKE LVFVIVTLSSAELPKQMEESFNEYKIFIKNTNLNIERIESPSNLKRTAKVDKNYEFFAKPDSVFIMGGASFKSNSILREQ GSIEAFLSEIKRKGQILIYIRDEAHIGSDIKINSKDKTFEEKMQLNASFILKMTATPKTDLELVHLSEKDLSQDDIQLLK TIKRHNPNLGTGEDYDDEEILEIACKKFNEIKKQYNDNIKEPGLVGINPAMLIQIDNSSEKDAQKAQKFDENIEKIIKIL EKHDLSWVKYFDQNKKESNLRQKSNFTLRDISRNMSSVDVIIFKIGPATGWNIPRACMLVQLRNISSSNLSIQTIGRIKR NPCPMYTLKDNSIARKYFIYSNVDPERKNVLKLYLKEKYKYDKFIWGQIQIPGMPDETRSKIINYKQYENEFEHKFNDKK QNQVKEIFKNDLRKYEDDYKANKFISIDTEKYGSARLIKSKISNIIELELAIIRLKNNLKKYFTSKIEDFFAKIKQDFLS DIKTNKQILDLIILLKYGPELAKIYKKTIKDQVKNAQYKLFEECLPKEIEFNSAENDKLVKTNDSSFAYKKIDDKTPEDN LPLDSEAELFFAKELIKISKAKQNIRFWAKNPVYTKLGFQYINGNEIAKSYPDFLVSKDGNYFYFEIKHYKDFDPEKTQL LIRGYNQYFKENQINQKNLTLAVCWVVPKYGDLYFAGSSNLEQIRDKIDFNKKTNSDINDISDKEFEEKRKKIAPMLLTD IIN
Sequences:
>Translated_803_residues MELTQSQSKAVEQLVEKTTLYLTSSEEIEPKLENDKNQTNPAKLKNAIYFKAPTGSGKTFMILNYIDKLIE*NKAKVGKE LVFVIVTLSSAELPKQMEESFNEYKIFIKNTNLNIERIESPSNLKRTAKVDKNYEFFAKPDSVFIMGGASFKSNSILREQ GSIEAFLSEIKRKGQILIYIRDEAHIGSDIKINSKDKTFEEKMQLNASFILKMTATPKTDLELVHLSEKDLSQDDIQLLK TIKRHNPNLGTGEDYDDEEILEIACKKFNEIKKQYNDNIKEPGLVGINPAMLIQIDNSSEKDAQKAQKFDENIEKIIKIL EKHDLSWVKYFDQNKKESNLRQKSNFTLRDISRNMSSVDVIIFKIGPATG*NIPRACMLVQLRNISSSNLSIQTIGRIKR NPCPMYTLKDNSIARKYFIYSNVDPERKNVLKLYLKEKYKYDKFI*GQIQIPGMPDETRSKIINYKQYENEFEHKFNDKK QNQVKEIFKNDLRKYEDDYKANKFISIDTEKYGSARLIKSKISNIIELELAIIRLKNNLKKYFTSKIEDFFAKIKQDFLS DIKTNKQILDLIILLKYGPELAKIYKKTIKDQVKNAQYKLFEECLPKEIEFNSAENDKLVKTNDSSFAYKKIDDKTPEDN LPLDSEAELFFAKELIKISKAKQNIRF*AKNPVYTKLGFQYINGNEIAKSYPDFLVSKDGNYFYFEIKHYKDFDPEKTQL LIRGYNQYFKENQINQKNLTLAVC*VVPKYGDLYFAGSSNLEQIRDKIDFNKKTNSDINDISDKEFEEKRKKIAPMLLTD IIN >Mature_803_residues MELTQSQSKAVEQLVEKTTLYLTSSEEIEPKLENDKNQTNPAKLKNAIYFKAPTGSGKTFMILNYIDKLIE*NKAKVGKE LVFVIVTLSSAELPKQMEESFNEYKIFIKNTNLNIERIESPSNLKRTAKVDKNYEFFAKPDSVFIMGGASFKSNSILREQ GSIEAFLSEIKRKGQILIYIRDEAHIGSDIKINSKDKTFEEKMQLNASFILKMTATPKTDLELVHLSEKDLSQDDIQLLK TIKRHNPNLGTGEDYDDEEILEIACKKFNEIKKQYNDNIKEPGLVGINPAMLIQIDNSSEKDAQKAQKFDENIEKIIKIL EKHDLSWVKYFDQNKKESNLRQKSNFTLRDISRNMSSVDVIIFKIGPATG*NIPRACMLVQLRNISSSNLSIQTIGRIKR NPCPMYTLKDNSIARKYFIYSNVDPERKNVLKLYLKEKYKYDKFI*GQIQIPGMPDETRSKIINYKQYENEFEHKFNDKK QNQVKEIFKNDLRKYEDDYKANKFISIDTEKYGSARLIKSKISNIIELELAIIRLKNNLKKYFTSKIEDFFAKIKQDFLS DIKTNKQILDLIILLKYGPELAKIYKKTIKDQVKNAQYKLFEECLPKEIEFNSAENDKLVKTNDSSFAYKKIDDKTPEDN LPLDSEAELFFAKELIKISKAKQNIRF*AKNPVYTKLGFQYINGNEIAKSYPDFLVSKDGNYFYFEIKHYKDFDPEKTQL LIRGYNQYFKENQINQKNLTLAVC*VVPKYGDLYFAGSSNLEQIRDKIDFNKKTNSDINDISDKEFEEKRKKIAPMLLTD IIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92717; Mature: 92717
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTQSQSKAVEQLVEKTTLYLTSSEEIEPKLENDKNQTNPAKLKNAIYFKAPTGSGKTF CCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCEE MILNYIDKLIENKAKVGKELVFVIVTLSSAELPKQMEESFNEYKIFIKNTNLNIERIESP EHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHCCCCEEEEEEECCCCEEECCCC SNLKRTAKVDKNYEFFAKPDSVFIMGGASFKSNSILREQGSIEAFLSEIKRKGQILIYIR HHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEE DEAHIGSDIKINSKDKTFEEKMQLNASFILKMTATPKTDLELVHLSEKDLSQDDIQLLKT CCCCCCCCEEECCCCCHHHHHHHCCEEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHH IKRHNPNLGTGEDYDDEEILEIACKKFNEIKKQYNDNIKEPGLVGINPAMLIQIDNSSEK HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCH DAQKAQKFDENIEKIIKILEKHDLSWVKYFDQNKKESNLRQKSNFTLRDISRNMSSVDVI HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCCCEEEE IFKIGPATGNIPRACMLVQLRNISSSNLSIQTIGRIKRNPCPMYTLKDNSIARKYFIYSN EEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCEEEECCCCCEEEEEEECC VDPERKNVLKLYLKEKYKYDKFIGQIQIPGMPDETRSKIINYKQYENEFEHKFNDKKQNQ CCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHCHHHHHHHHHHHCCCCHHHH VKEIFKNDLRKYEDDYKANKFISIDTEKYGSARLIKSKISNIIELELAIIRLKNNLKKYF HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSKIEDFFAKIKQDFLSDIKTNKQILDLIILLKYGPELAKIYKKTIKDQVKNAQYKLFEE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH CLPKEIEFNSAENDKLVKTNDSSFAYKKIDDKTPEDNLPLDSEAELFFAKELIKISKAKQ HCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH NIRFAKNPVYTKLGFQYINGNEIAKSYPDFLVSKDGNYFYFEIKHYKDFDPEKTQLLIRG CCHHCCCCCEEECCEEEECCCHHHHHCCCCEEECCCCEEEEEEEECCCCCCHHHHHHHHH YNQYFKENQINQKNLTLAVCVVPKYGDLYFAGSSNLEQIRDKIDFNKKTNSDINDISDKE HHHHHHHCCCCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCHH FEEKRKKIAPMLLTDIIN HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MELTQSQSKAVEQLVEKTTLYLTSSEEIEPKLENDKNQTNPAKLKNAIYFKAPTGSGKTF CCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCEE MILNYIDKLIENKAKVGKELVFVIVTLSSAELPKQMEESFNEYKIFIKNTNLNIERIESP EHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHCCCCEEEEEEECCCCEEECCCC SNLKRTAKVDKNYEFFAKPDSVFIMGGASFKSNSILREQGSIEAFLSEIKRKGQILIYIR HHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHCCCEEEEEE DEAHIGSDIKINSKDKTFEEKMQLNASFILKMTATPKTDLELVHLSEKDLSQDDIQLLKT CCCCCCCCEEECCCCCHHHHHHHCCEEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHH IKRHNPNLGTGEDYDDEEILEIACKKFNEIKKQYNDNIKEPGLVGINPAMLIQIDNSSEK HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCH DAQKAQKFDENIEKIIKILEKHDLSWVKYFDQNKKESNLRQKSNFTLRDISRNMSSVDVI HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCCCEEEE IFKIGPATGNIPRACMLVQLRNISSSNLSIQTIGRIKRNPCPMYTLKDNSIARKYFIYSN EEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCEEEECCCCCEEEEEEECC VDPERKNVLKLYLKEKYKYDKFIGQIQIPGMPDETRSKIINYKQYENEFEHKFNDKKQNQ CCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHCHHHHHHHHHHHCCCCHHHH VKEIFKNDLRKYEDDYKANKFISIDTEKYGSARLIKSKISNIIELELAIIRLKNNLKKYF HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSKIEDFFAKIKQDFLSDIKTNKQILDLIILLKYGPELAKIYKKTIKDQVKNAQYKLFEE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH CLPKEIEFNSAENDKLVKTNDSSFAYKKIDDKTPEDNLPLDSEAELFFAKELIKISKAKQ HCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH NIRFAKNPVYTKLGFQYINGNEIAKSYPDFLVSKDGNYFYFEIKHYKDFDPEKTQLLIRG CCHHCCCCCEEECCEEEECCCHHHHHCCCCEEECCCCEEEEEEEECCCCCCHHHHHHHHH YNQYFKENQINQKNLTLAVCVVPKYGDLYFAGSSNLEQIRDKIDFNKKTNSDINDISDKE HHHHHHHCCCCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCHH FEEKRKKIAPMLLTDIIN HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA