Definition | Mycoplasma hyopneumoniae 232, complete genome. |
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Accession | NC_006360 |
Length | 892,758 |
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The map label for this gene is 54020129
Identifier: 54020129
GI number: 54020129
Start: 334609
End: 336081
Strand: Direct
Name: 54020129
Synonym: mhp293
Alternate gene names: NA
Gene position: 334609-336081 (Clockwise)
Preceding gene: 54020128
Following gene: 161936258
Centisome position: 37.48
GC content: 25.87
Gene sequence:
>1473_bases ATGAAAAATAAACTAATCCTTAGTAAATTTTTGGGAATAACCCTTTTAATTCCGGCATTTTTTTTAACTTCCTGCAGAAA TTTAATTCCTTTTATTACTAAACAAATTTTTAACAAAGATGAGGGAATTAACAATCCAGAAAATTATAATTCTTACTATT TTTTAAATTTACTAGCGAGGCATTATGAAGAATTTAATGCAAAAAATGGTACTTTTTCGGCCTTACATCTGTTTTATAAT CAACCCGAAAAACAACGGGACAAATTTTTATTCCTTGGGGAACAAGATAGAATAACAATTGAAAATTTAGAGCAATTTCA AAAAATTATTGTTGATAGAACTGAAGAAATTATAAAAAATAATCCTAATATTGCCAATGTTAATAGTTCTGAACTCAAGT CAGAATTTGAAGACAAATTTCTAAAAGGTGAGCTTCTTGAAAAAGTCTTAGAAAAAAACAATATCATAATAGACGAACAT GGCAGCTATTCAATGCCAACTCGTGTTACCTACTATTATTTTGAAGAAAATGGTTTTTCAAACATTATAGCCACAGGATT TACACCAGATTATATTATAGATGCAGAATTAATTGAACCCGCTGTAGTTTTTGATGATTCACCTTTTTTTAATGTTATAG TCTACCCTAAAAATAAAAAAATCACCTTTAGGAAGATTGAAGAAAAAATTTACAATGGCGATAATGGCGAAATTAAAGAC TATAAAAAAAAGAAAATATTAATTGAAAGAGAAGCTAGAAAAATTTATAATAAACTCGCAAAAAAGTACAATTTGTCAAA AAACAAGATTAGTACTTCTTCGCCCACTTTTATGTTTAATATTATCGATTTTAGCCAAGAAATTAATAATATTAAAACTT TAAAGCCAAAAATTCTTGATTTAATTACAAATAAAATTAATCCTTGATCTAACAGTTTTTTACAAAAAAAACATGCAATT ATTAAAAATATTGACGAATTTAAGACATCAATTATTGACCGAATTTTAAAATTAGATCCTAAATTAAAACTTGACCAAAA TGATTTAATTTCTGATTTTGAAGAAAAATTTCTAAACGGCGAAAAACTTGATGAATTTCTGAAAAATAATAATATTTTTA TTTACGAAACTTGGGAGCGAATTGGTTATGAACCATTTTGAAGATTGATTCGCGACCCCATACCGGATCCTACTAATTTT CCAAAAACGGTTGAATGAGAAAAATTGGTTCTTAGAAAAACAGAAAATAATAATATTTTTTTGACAACAATTTTTAAAAC GGATTTAACACTAAATTTTAATACAAATCCTGAATCTAGTTTTGATAAAGTGGCTTTCCAAATCCTGGCTTTTCCTAAGA ATAAAAATATCGTTTTTGATAAAAAAGTTAGCCGACTTGAACTAATTAAAGATTTAAAAAACAATTATTTAGATAAATAT GAGGAAGATCCAAAAGAAAAAAACTACATATAA
Upstream 100 bases:
>100_bases AAAGAATCAGGCTACTACCGGCTTTATATCAAAAAATTTAAATCTGCAACTTTTGATAATTCTGTTGAAGATAAATTAGC ACTTTCTTATTTGGTTAATA
Downstream 100 bases:
>100_bases ATTTAAATTATTAGAAAAAAATCAGACAAATAATTTTTATTTGTAGTTTGTGGTAAAAACTCATTTGCATTTTAAGCAAC CTTTTTATAGACTTTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MKNKLILSKFLGITLLIPAFFLTSCRNLIPFITKQIFNKDEGINNPENYNSYYFLNLLARHYEEFNAKNGTFSALHLFYN QPEKQRDKFLFLGEQDRITIENLEQFQKIIVDRTEEIIKNNPNIANVNSSELKSEFEDKFLKGELLEKVLEKNNIIIDEH GSYSMPTRVTYYYFEENGFSNIIATGFTPDYIIDAELIEPAVVFDDSPFFNVIVYPKNKKITFRKIEEKIYNGDNGEIKD YKKKKILIEREARKIYNKLAKKYNLSKNKISTSSPTFMFNIIDFSQEINNIKTLKPKILDLITNKINPWSNSFLQKKHAI IKNIDEFKTSIIDRILKLDPKLKLDQNDLISDFEEKFLNGEKLDEFLKNNNIFIYETWERIGYEPFWRLIRDPIPDPTNF PKTVEWEKLVLRKTENNNIFLTTIFKTDLTLNFNTNPESSFDKVAFQILAFPKNKNIVFDKKVSRLELIKDLKNNYLDKY EEDPKEKNYI
Sequences:
>Translated_490_residues MKNKLILSKFLGITLLIPAFFLTSCRNLIPFITKQIFNKDEGINNPENYNSYYFLNLLARHYEEFNAKNGTFSALHLFYN QPEKQRDKFLFLGEQDRITIENLEQFQKIIVDRTEEIIKNNPNIANVNSSELKSEFEDKFLKGELLEKVLEKNNIIIDEH GSYSMPTRVTYYYFEENGFSNIIATGFTPDYIIDAELIEPAVVFDDSPFFNVIVYPKNKKITFRKIEEKIYNGDNGEIKD YKKKKILIEREARKIYNKLAKKYNLSKNKISTSSPTFMFNIIDFSQEINNIKTLKPKILDLITNKINP*SNSFLQKKHAI IKNIDEFKTSIIDRILKLDPKLKLDQNDLISDFEEKFLNGEKLDEFLKNNNIFIYETWERIGYEPF*RLIRDPIPDPTNF PKTVE*EKLVLRKTENNNIFLTTIFKTDLTLNFNTNPESSFDKVAFQILAFPKNKNIVFDKKVSRLELIKDLKNNYLDKY EEDPKEKNYI >Mature_490_residues MKNKLILSKFLGITLLIPAFFLTSCRNLIPFITKQIFNKDEGINNPENYNSYYFLNLLARHYEEFNAKNGTFSALHLFYN QPEKQRDKFLFLGEQDRITIENLEQFQKIIVDRTEEIIKNNPNIANVNSSELKSEFEDKFLKGELLEKVLEKNNIIIDEH GSYSMPTRVTYYYFEENGFSNIIATGFTPDYIIDAELIEPAVVFDDSPFFNVIVYPKNKKITFRKIEEKIYNGDNGEIKD YKKKKILIEREARKIYNKLAKKYNLSKNKISTSSPTFMFNIIDFSQEINNIKTLKPKILDLITNKINP*SNSFLQKKHAI IKNIDEFKTSIIDRILKLDPKLKLDQNDLISDFEEKFLNGEKLDEFLKNNNIFIYETWERIGYEPF*RLIRDPIPDPTNF PKTVE*EKLVLRKTENNNIFLTTIFKTDLTLNFNTNPESSFDKVAFQILAFPKNKNIVFDKKVSRLELIKDLKNNYLDKY EEDPKEKNYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57429; Mature: 57429
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKLILSKFLGITLLIPAFFLTSCRNLIPFITKQIFNKDEGINNPENYNSYYFLNLLAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH HYEEFNAKNGTFSALHLFYNQPEKQRDKFLFLGEQDRITIENLEQFQKIIVDRTEEIIKN HHHHHCCCCCCHHHHHEECCCCHHHCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHC NPNIANVNSSELKSEFEDKFLKGELLEKVLEKNNIIIDEHGSYSMPTRVTYYYFEENGFS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEEECCCCC NIIATGFTPDYIIDAELIEPAVVFDDSPFFNVIVYPKNKKITFRKIEEKIYNGDNGEIKD CEEECCCCCCEEEEHHHHCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCC YKKKKILIEREARKIYNKLAKKYNLSKNKISTSSPTFMFNIIDFSQEINNIKTLKPKILD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH LITNKINPSNSFLQKKHAIIKNIDEFKTSIIDRILKLDPKLKLDQNDLISDFEEKFLNGE HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHH KLDEFLKNNNIFIYETWERIGYEPFRLIRDPIPDPTNFPKTVEEKLVLRKTENNNIFLTT HHHHHHHCCCEEEEECHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHEEEECCCCEEEEE IFKTDLTLNFNTNPESSFDKVAFQILAFPKNKNIVFDKKVSRLELIKDLKNNYLDKYEED EEEEEEEEEECCCCCCHHHHHHHHHEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHCC PKEKNYI CCCCCCC >Mature Secondary Structure MKNKLILSKFLGITLLIPAFFLTSCRNLIPFITKQIFNKDEGINNPENYNSYYFLNLLAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH HYEEFNAKNGTFSALHLFYNQPEKQRDKFLFLGEQDRITIENLEQFQKIIVDRTEEIIKN HHHHHCCCCCCHHHHHEECCCCHHHCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHC NPNIANVNSSELKSEFEDKFLKGELLEKVLEKNNIIIDEHGSYSMPTRVTYYYFEENGFS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEEECCCCC NIIATGFTPDYIIDAELIEPAVVFDDSPFFNVIVYPKNKKITFRKIEEKIYNGDNGEIKD CEEECCCCCCEEEEHHHHCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCC YKKKKILIEREARKIYNKLAKKYNLSKNKISTSSPTFMFNIIDFSQEINNIKTLKPKILD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH LITNKINPSNSFLQKKHAIIKNIDEFKTSIIDRILKLDPKLKLDQNDLISDFEEKFLNGE HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHH KLDEFLKNNNIFIYETWERIGYEPFRLIRDPIPDPTNFPKTVEEKLVLRKTENNNIFLTT HHHHHHHCCCEEEEECHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHEEEECCCCEEEEE IFKTDLTLNFNTNPESSFDKVAFQILAFPKNKNIVFDKKVSRLELIKDLKNNYLDKYEED EEEEEEEEEECCCCCCHHHHHHHHHEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHCC PKEKNYI CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA