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The map label for this gene is infA

Identifier: 54020092

GI number: 54020092

Start: 241453

End: 241680

Strand: Direct

Name: infA

Synonym: mhp210

Alternate gene names: 54020092

Gene position: 241453-241680 (Clockwise)

Preceding gene: 54020091

Following gene: 54020093

Centisome position: 27.05

GC content: 31.58

Gene sequence:

>228_bases
ATGGCAAATTTACCAAAAGAACAAAAACTATTATTTCAGGGAAAAGTCACCCACGTTTTTAATGCCCAGGAATATGAGGT
AACTCTCGAAAATGGGATTAAATTAAACTGTCATATCGCGGGAAAAATGAAAATTCATCATATAAAAATTATTATCGGTG
ATATGGTAAAGGTGGAAATTTCGCCTTATGACTTATCAAAAGGAAGAATAGTTTACCGGTTTAAATAA

Upstream 100 bases:

>100_bases
GGTAAAAGCAAAAGATGGCAGAAAAACCTCCCATTATGAAGAGACAATTTTAATTAAGGATGGTAGAGGGATAATTCTTA
CAGAAATGGCTCAAAACTAG

Downstream 100 bases:

>100_bases
TTTATATGACTAAATTGTTTAAATAAATTTTAAAGGATAAAAATATGAAAGTTCGTGCAAGTATTAAAAAAATTTGCAAA
GATTGCAAAATTATTAAACG

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MANLPKEQKLLFQGKVTHVFNAQEYEVTLENGIKLNCHIAGKMKIHHIKIIIGDMVKVEISPYDLSKGRIVYRFK

Sequences:

>Translated_75_residues
MANLPKEQKLLFQGKVTHVFNAQEYEVTLENGIKLNCHIAGKMKIHHIKIIIGDMVKVEISPYDLSKGRIVYRFK
>Mature_74_residues
ANLPKEQKLLFQGKVTHVFNAQEYEVTLENGIKLNCHIAGKMKIHHIKIIIGDMVKVEISPYDLSKGRIVYRFK

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain

Homologues:

Organism=Escherichia coli, GI1787110, Length=72, Percent_Identity=45.8333333333333, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IF1_MYCH2 (Q601J2)

Other databases:

- EMBL:   AE017332
- RefSeq:   YP_115723.1
- ProteinModelPortal:   Q601J2
- SMR:   Q601J2
- STRING:   Q601J2
- GeneID:   3105665
- GenomeReviews:   AE017332_GR
- KEGG:   mhy:mhp210
- eggNOG:   COG0361
- HOGENOM:   HBG286099
- OMA:   EFSPYDL
- ProtClustDB:   PRK00276
- BioCyc:   MHYO295358:MHP210-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00075
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00316
- TIGRFAMs:   TIGR00008

Pfam domain/function: PF01176 eIF-1a; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 8666; Mature: 8535

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLPKEQKLLFQGKVTHVFNAQEYEVTLENGIKLNCHIAGKMKIHHIKIIIGDMVKVEI
CCCCCCCCEEEEECCEEEEECCEEEEEEECCCCEEEEEEECCEEEEEEEEEECCEEEEEE
SPYDLSKGRIVYRFK
CCCCCCCCEEEEEEC
>Mature Secondary Structure 
ANLPKEQKLLFQGKVTHVFNAQEYEVTLENGIKLNCHIAGKMKIHHIKIIIGDMVKVEI
CCCCCCCEEEEECCEEEEECCEEEEEEECCCCEEEEEEECCEEEEEEEEEECCEEEEEE
SPYDLSKGRIVYRFK
CCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA