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The map label for this gene is ssb [H]

Identifier: 52788034

GI number: 52788034

Start: 4207080

End: 4207592

Strand: Reverse

Name: ssb [H]

Synonym: BLi04362

Alternate gene names: 52788034

Gene position: 4207592-4207080 (Counterclockwise)

Preceding gene: 52788035

Following gene: 52788033

Centisome position: 99.64

GC content: 48.73

Gene sequence:

>513_bases
ATGCTTAACCGAGTTGTTTTAGTCGGCAGACTGACAAAGGACCCAGAGCTTCGTTATACTCCTAGCGGTGCAGCTGTTGC
CACCTTTACGCTTGCTGTCAATCGTACGTTTACGAATCAGCAGGGTGAACGTGAAGCTGATTTCATCAACTGTGTTGTCT
GGAGAAGACAAGCCGAAAACGTTGCAAATTTCCTTAAAAAAGGAAGTCTTGCGGGTGTAGATGGACGTTTGCAAACGCGC
AGCTATGAAAATCAGCAGGGACAGCGTGTATACGTCACGGAAGTTCAAGCTGAAAGTGTTCAATTTCTGGAGCCTAAAGG
CGGCGGTTCTGGTTCCGGCGGTTACAGCGGAGGCCAGGGAGGCCAACACTTTGGCGGCGGACAAAATGAACCGGCTCCAT
TCGGCGGCAGTCAAAACAATCAGAATCGCAATCAAGGCAACAGCTTCAATGACGATCCATTCGCAAATGATGGAAAGCCG
ATTGACATCTCTGATGACGACTTGCCATTTTAA

Upstream 100 bases:

>100_bases
GCTAAAATCAGTGACGACATCATTCGCCACATCGTGGTTAAAGAAGAAGAATAAACAGAATTGAATTATATACTCTAAAG
CAAAAGGATGGTCTCTCAAT

Downstream 100 bases:

>100_bases
TGGATGACGGACGAATAAAATAAAACCAGAACAGAAAGGAGGGAAATAACGATGGCAGGAGGACGCAGAGGCGGTCGTGC
GAAACGCCGTAAAGTGTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MLNRVVLVGRLTKDPELRYTPSGAAVATFTLAVNRTFTNQQGEREADFINCVVWRRQAENVANFLKKGSLAGVDGRLQTR
SYENQQGQRVYVTEVQAESVQFLEPKGGGSGSGGYSGGQGGQHFGGGQNEPAPFGGSQNNQNRNQGNSFNDDPFANDGKP
IDISDDDLPF

Sequences:

>Translated_170_residues
MLNRVVLVGRLTKDPELRYTPSGAAVATFTLAVNRTFTNQQGEREADFINCVVWRRQAENVANFLKKGSLAGVDGRLQTR
SYENQQGQRVYVTEVQAESVQFLEPKGGGSGSGGYSGGQGGQHFGGGQNEPAPFGGSQNNQNRNQGNSFNDDPFANDGKP
IDISDDDLPF
>Mature_170_residues
MLNRVVLVGRLTKDPELRYTPSGAAVATFTLAVNRTFTNQQGEREADFINCVVWRRQAENVANFLKKGSLAGVDGRLQTR
SYENQQGQRVYVTEVQAESVQFLEPKGGGSGSGGYSGGQGGQHFGGGQNEPAPFGGSQNNQNRNQGNSFNDDPFANDGKP
IDISDDDLPF

Specific function: Essential for replication of the chromosome. It is also involved in DNA recombination and repair. Binds ssDNA [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=115, Percent_Identity=35.6521739130435, Blast_Score=77, Evalue=5e-16,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18373; Mature: 18373

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRVVLVGRLTKDPELRYTPSGAAVATFTLAVNRTFTNQQGEREADFINCVVWRRQAEN
CCCEEEEEEECCCCCCEEECCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
VANFLKKGSLAGVDGRLQTRSYENQQGQRVYVTEVQAESVQFLEPKGGGSGSGGYSGGQG
HHHHHHCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCC
GQHFGGGQNEPAPFGGSQNNQNRNQGNSFNDDPFANDGKPIDISDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MLNRVVLVGRLTKDPELRYTPSGAAVATFTLAVNRTFTNQQGEREADFINCVVWRRQAEN
CCCEEEEEEECCCCCCEEECCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
VANFLKKGSLAGVDGRLQTRSYENQQGQRVYVTEVQAESVQFLEPKGGGSGSGGYSGGQG
HHHHHHCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCC
GQHFGGGQNEPAPFGGSQNNQNRNQGNSFNDDPFANDGKPIDISDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]