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The map label for this gene is yycI [H]

Identifier: 52788008

GI number: 52788008

Start: 4182024

End: 4182872

Strand: Reverse

Name: yycI [H]

Synonym: BLi04332

Alternate gene names: 52788008

Gene position: 4182872-4182024 (Counterclockwise)

Preceding gene: 52788009

Following gene: 52788007

Centisome position: 99.06

GC content: 40.99

Gene sequence:

>849_bases
ATGGAGTGGAATAGAACAAAAACAATCTTCATTATCGTCTTCCTCATCCTTGATATCTTTTTGGCCTTTCAATACTTTAA
TAAGCGCAGCAACAATCAGTTTCCGATTTTAGAAAAATCAACGCTGCAGGAGGATATGAAAGCAGACCATATTTCATACG
GCAATTTGTCTAAAGAGACGTCAAAAGGCTCCTCAATCTCTGCACAAAAGCGAGTCTTTAAGCAAAGCGAGATTAAATCG
TTAAAAGGGCAAAAGCCGAAGGCGTTAATGAATACCGCAAAAGAGAACGCTTTGACAGAAATAGAAATGGAGTTTGAAAC
ACCCATTGCGCTTCCGAAAACGGATATGAAGACAAAAGCAAGGGAAATCGTGAATGAAGAGATTATCGACGGCAATAAGT
ACAAGCTTTGGAAGGTCGATAAGTCCGGAAAACAGATTGTTTTCTTCCAAACCTATAATGGGAATTACATTTTTCAGGAC
CGGCAAAATGATGATAACAACGAGATGGGCGAAGTCGTTCTGTACCTGAATAATAAAAACGAAGTCGTGTCTTATAAGCA
GTCAATGCTGCAGGATATTAAAGAAGTCAAAACGGAAAATCTGATCTCTGCAGTCGGCGCGGTTGAAGCTTTGTACTACC
CGGATTATTTGAAGAAGTACAGCAAAATTAAATCAGCCGAGCTTGGCTATTTCACGCAGTATCCGCTGGCAAGCGCTCAA
ATTTTCGTGCCCGTTTGGCGGATCGAAGTGGAGCGCAAAACGGACGATAAAACCATTCACGAAGAATTTATCGTGGATGC
ACGGGACGGAGCGCTTCTTCAATCACAAGAGAAAAAGGAAAAATCATAA

Upstream 100 bases:

>100_bases
GACCCTCTTGTCAAACTTGTGCCGACATGGTGCATTAAAATAAACGGTACGGTAAAGCCGGTATCAAAGAAGGATTCAGC
GGTGAAGGAGGGCATAGAAA

Downstream 100 bases:

>100_bases
TGGAGTGAGAAACCATGAGCCTGCAATTTAGCGTACTTGCGAGCGGGAGTACCGGTAATGCTTTATATTTGGAAACCGAT
GACCACGCTTTTTTAGTTGA

Product: YycI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MEWNRTKTIFIIVFLILDIFLAFQYFNKRSNNQFPILEKSTLQEDMKADHISYGNLSKETSKGSSISAQKRVFKQSEIKS
LKGQKPKALMNTAKENALTEIEMEFETPIALPKTDMKTKAREIVNEEIIDGNKYKLWKVDKSGKQIVFFQTYNGNYIFQD
RQNDDNNEMGEVVLYLNNKNEVVSYKQSMLQDIKEVKTENLISAVGAVEALYYPDYLKKYSKIKSAELGYFTQYPLASAQ
IFVPVWRIEVERKTDDKTIHEEFIVDARDGALLQSQEKKEKS

Sequences:

>Translated_282_residues
MEWNRTKTIFIIVFLILDIFLAFQYFNKRSNNQFPILEKSTLQEDMKADHISYGNLSKETSKGSSISAQKRVFKQSEIKS
LKGQKPKALMNTAKENALTEIEMEFETPIALPKTDMKTKAREIVNEEIIDGNKYKLWKVDKSGKQIVFFQTYNGNYIFQD
RQNDDNNEMGEVVLYLNNKNEVVSYKQSMLQDIKEVKTENLISAVGAVEALYYPDYLKKYSKIKSAELGYFTQYPLASAQ
IFVPVWRIEVERKTDDKTIHEEFIVDARDGALLQSQEKKEKS
>Mature_282_residues
MEWNRTKTIFIIVFLILDIFLAFQYFNKRSNNQFPILEKSTLQEDMKADHISYGNLSKETSKGSSISAQKRVFKQSEIKS
LKGQKPKALMNTAKENALTEIEMEFETPIALPKTDMKTKAREIVNEEIIDGNKYKLWKVDKSGKQIVFFQTYNGNYIFQD
RQNDDNNEMGEVVLYLNNKNEVVSYKQSMLQDIKEVKTENLISAVGAVEALYYPDYLKKYSKIKSAELGYFTQYPLASAQ
IFVPVWRIEVERKTDDKTIHEEFIVDARDGALLQSQEKKEKS

Specific function: Together with yycH, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4853

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018604 [H]

Pfam domain/function: PF09648 YycI [H]

EC number: NA

Molecular weight: Translated: 32769; Mature: 32769

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWNRTKTIFIIVFLILDIFLAFQYFNKRSNNQFPILEKSTLQEDMKADHISYGNLSKET
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
SKGSSISAQKRVFKQSEIKSLKGQKPKALMNTAKENALTEIEMEFETPIALPKTDMKTKA
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHH
REIVNEEIIDGNKYKLWKVDKSGKQIVFFQTYNGNYIFQDRQNDDNNEMGEVVLYLNNKN
HHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCCCCEEEEEECCCC
EVVSYKQSMLQDIKEVKTENLISAVGAVEALYYPDYLKKYSKIKSAELGYFTQYPLASAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEECCCCCCCE
IFVPVWRIEVERKTDDKTIHEEFIVDARDGALLQSQEKKEKS
EEEEEEEEEEECCCCCHHHHHHHEEECCCCCHHCCHHHHCCC
>Mature Secondary Structure
MEWNRTKTIFIIVFLILDIFLAFQYFNKRSNNQFPILEKSTLQEDMKADHISYGNLSKET
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
SKGSSISAQKRVFKQSEIKSLKGQKPKALMNTAKENALTEIEMEFETPIALPKTDMKTKA
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHH
REIVNEEIIDGNKYKLWKVDKSGKQIVFFQTYNGNYIFQDRQNDDNNEMGEVVLYLNNKN
HHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCCCCEEEEEECCCC
EVVSYKQSMLQDIKEVKTENLISAVGAVEALYYPDYLKKYSKIKSAELGYFTQYPLASAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEECCCCCCCE
IFVPVWRIEVERKTDDKTIHEEFIVDARDGALLQSQEKKEKS
EEEEEEEEEEECCCCCHHHHHHHEEECCCCCHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]