BacMap

Definition	Bacillus licheniformis ATCC 14580, complete genome.
Accession	NC_006322
Length	4,222,645

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The map label for this gene is vat [H]

Identifier: 52787853

GI number: 52787853

Start: 4002268

End: 4003932

Strand: Reverse

Name: vat [H]

Synonym: BLi04176

Alternate gene names: 52787853

Gene position: 4003932-4002268 (Counterclockwise)

Preceding gene: 52787855

Following gene: 52787852

Centisome position: 94.82

GC content: 41.14

Gene sequence:

>1665_bases
ATGGAAGGATATCATCACTTTAGAAAAGAAGTAGCGAATTATTTCAGGGCCCGCTTTCCGTTCCTGTATATTTCTACATG
GGAAGAAGAACGTGTCATAGATCAACTGAGTCATATTGTTTCGGATACAGAATTGATTAGAACACCAAGAACCTTATTTG
TTTGGAGTTTAACCAAAGGGTTTGAAAGCAATGGAATGCCTCCATCAGCCGAAACAAAAGACCCGTTAAAGGCTTTGGCG
TTCATTGAAAAATATGATCAGCCAGCAGTCTTTATATTGAAGGATTTTTATGTTTATTTGGGTGCAAATAATCGCCCCCC
TGAATACCGTTTGATTCGTAAAATGAAAGATCTTGTCTCTGTATTGGAAAAGAGTCTTGTTTCCAAAAATGTTGTGCTTG
TGGCGCCAACATTAACGCTTCCTCCTGAATTGGAAAAGGACATCACAATTGTAGAGTTTCAATTGCCCAGCTTTGCAGAA
ATTAAAGAAACGCTCAAGAAAATGATCGAAATGAATCAAGGGCAAAATCGGGCAATCGTTAGCTTGACTGAGGACGAAGA
AGAACGCCTAGTAAAAGCAGCACTGGGATTAACTTTAAAAGAAGCAGAAAATGCGTTTGCACTGGCGCTAGTAAGCAAAG
GGCGTCTAGATTCGGATAGCGTTGATCAAATTCTTTTTGAAAAGCAGCAAATCATTAAAAAAACCGGCGTATTAGAGTTT
ATTAAAAGTGAACCAAATATCCAGGATGTAGGTGGATTGGAAAATATCAAACGTTGGTTGAATAAAAGAAACAAGTCATG
GATGGACTCCGCTCAGGACTATGGGCTGCCATCCCCTAAGGGTCTTCTATTAACGGGGGTTCCCGGCTGCGGAAAAAGCT
TAATTGCTAAAGCTGTCAGCTCTATGTGGAAGCTTCCTCTTTTAAAATTGGACATGGGAAAAATATTCAGCGGCATTGTC
GGAAGCAGTGAAGAAAATATGAGAAACGCTTTATCTACGGCAGAGGCCATTTCTCCGTCTATTTTGTGGGTCGATGAGAT
TGAAAAAGGATTGGGGAATAGCGGAACAGCTGGAGACGGGGGGACTTCGAAGAGAGTGCTTGGGAATTTCTTAACCTGGA
TGCAGGAAAAATCAAAGCCTGTATTTGTGATAGCAACTGCAAATAATATAGACGCTCTTCCGCCCGAATTCTTAAGGAAA
GGACGTTTTGATGAGATATTTTTTGTTGATCTGCCAACGAAAAAAGAAAGAAAAGAAATCTTTCGCATCCATCTTGAAAA
GAGGCTAACAAACCCGAAAGCTGCCGGGAATTTTTCAATAGAACCACCTGTCTTGGACAAGCTTGCAGAACTGACGGAAT
CATTTATTGGTGCTGAAATCGAACAAGTCGTAATTTCTGCATTATTTGAAGCCTTTTCTGAAAATCGAAGCTTAACGGTT
GAGGATCTTGAGAAAGTGATTAAGCAGACTGTTCCTTTGGCTGTTACGCAATCAGAGCAAATTCTTGCAATTCGGGAATG
GGCAAGTCTTCGGGCTGTATCGGCTGCCCGTCAGGAAGATCTGAAGGAATACCAATCTATTCAGCTAAAGAAAGATGACG
AAAATCCGCGTGATAAAGATGCCGATTTACATACAAGCCGGGGTGGCAGAGCTGTAGAGTTTTAG

Upstream 100 bases:

>100_bases
ATCATTTAGAGAAGGCGAATGGGAGGATTGAAATCTTTTATTCCTGTTGTGGAAAAATTTAGTATAATAATAAAAAATAG
GTCAATAGAAAGGGAGAAAA

Downstream 100 bases:

>100_bases
GAAGAGGTGTCAAAGCATGAGTATTGAAATTGTTTTATTACCAGTTGCGATTGCAGCGACCCAAGCGATTGCATCCTATT
TGGCAGAAAACGAATCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MEGYHHFRKEVANYFRARFPFLYISTWEEERVIDQLSHIVSDTELIRTPRTLFVWSLTKGFESNGMPPSAETKDPLKALA
FIEKYDQPAVFILKDFYVYLGANNRPPEYRLIRKMKDLVSVLEKSLVSKNVVLVAPTLTLPPELEKDITIVEFQLPSFAE
IKETLKKMIEMNQGQNRAIVSLTEDEEERLVKAALGLTLKEAENAFALALVSKGRLDSDSVDQILFEKQQIIKKTGVLEF
IKSEPNIQDVGGLENIKRWLNKRNKSWMDSAQDYGLPSPKGLLLTGVPGCGKSLIAKAVSSMWKLPLLKLDMGKIFSGIV
GSSEENMRNALSTAEAISPSILWVDEIEKGLGNSGTAGDGGTSKRVLGNFLTWMQEKSKPVFVIATANNIDALPPEFLRK
GRFDEIFFVDLPTKKERKEIFRIHLEKRLTNPKAAGNFSIEPPVLDKLAELTESFIGAEIEQVVISALFEAFSENRSLTV
EDLEKVIKQTVPLAVTQSEQILAIREWASLRAVSAARQEDLKEYQSIQLKKDDENPRDKDADLHTSRGGRAVEF

Sequences:

>Translated_554_residues
MEGYHHFRKEVANYFRARFPFLYISTWEEERVIDQLSHIVSDTELIRTPRTLFVWSLTKGFESNGMPPSAETKDPLKALA
FIEKYDQPAVFILKDFYVYLGANNRPPEYRLIRKMKDLVSVLEKSLVSKNVVLVAPTLTLPPELEKDITIVEFQLPSFAE
IKETLKKMIEMNQGQNRAIVSLTEDEEERLVKAALGLTLKEAENAFALALVSKGRLDSDSVDQILFEKQQIIKKTGVLEF
IKSEPNIQDVGGLENIKRWLNKRNKSWMDSAQDYGLPSPKGLLLTGVPGCGKSLIAKAVSSMWKLPLLKLDMGKIFSGIV
GSSEENMRNALSTAEAISPSILWVDEIEKGLGNSGTAGDGGTSKRVLGNFLTWMQEKSKPVFVIATANNIDALPPEFLRK
GRFDEIFFVDLPTKKERKEIFRIHLEKRLTNPKAAGNFSIEPPVLDKLAELTESFIGAEIEQVVISALFEAFSENRSLTV
EDLEKVIKQTVPLAVTQSEQILAIREWASLRAVSAARQEDLKEYQSIQLKKDDENPRDKDADLHTSRGGRAVEF
>Mature_554_residues
MEGYHHFRKEVANYFRARFPFLYISTWEEERVIDQLSHIVSDTELIRTPRTLFVWSLTKGFESNGMPPSAETKDPLKALA
FIEKYDQPAVFILKDFYVYLGANNRPPEYRLIRKMKDLVSVLEKSLVSKNVVLVAPTLTLPPELEKDITIVEFQLPSFAE
IKETLKKMIEMNQGQNRAIVSLTEDEEERLVKAALGLTLKEAENAFALALVSKGRLDSDSVDQILFEKQQIIKKTGVLEF
IKSEPNIQDVGGLENIKRWLNKRNKSWMDSAQDYGLPSPKGLLLTGVPGCGKSLIAKAVSSMWKLPLLKLDMGKIFSGIV
GSSEENMRNALSTAEAISPSILWVDEIEKGLGNSGTAGDGGTSKRVLGNFLTWMQEKSKPVFVIATANNIDALPPEFLRK
GRFDEIFFVDLPTKKERKEIFRIHLEKRLTNPKAAGNFSIEPPVLDKLAELTESFIGAEIEQVVISALFEAFSENRSLTV
EDLEKVIKQTVPLAVTQSEQILAIREWASLRAVSAARQEDLKEYQSIQLKKDDENPRDKDADLHTSRGGRAVEF

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI157671927, Length=256, Percent_Identity=32.03125, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI45643125, Length=251, Percent_Identity=31.0756972111554, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI45643123, Length=251, Percent_Identity=31.0756972111554, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI4507173, Length=208, Percent_Identity=34.1346153846154, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI6005942, Length=228, Percent_Identity=30.2631578947368, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI300192933, Length=225, Percent_Identity=31.5555555555556, Blast_Score=100, Evalue=6e-21,
Organism=Homo sapiens, GI21361144, Length=249, Percent_Identity=30.9236947791165, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI229577436, Length=412, Percent_Identity=24.7572815533981, Blast_Score=98, Evalue=3e-20,
Organism=Homo sapiens, GI24497618, Length=206, Percent_Identity=30.0970873786408, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI24430151, Length=246, Percent_Identity=28.8617886178862, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI195539395, Length=226, Percent_Identity=29.646017699115, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI153792536, Length=206, Percent_Identity=30.0970873786408, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI24497435, Length=222, Percent_Identity=30.6306306306306, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI194018488, Length=250, Percent_Identity=29.6, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI14149767, Length=307, Percent_Identity=28.3387622149837, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI62177112, Length=307, Percent_Identity=28.3387622149837, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI5729991, Length=251, Percent_Identity=26.2948207171315, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI4505725, Length=195, Percent_Identity=28.2051282051282, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI89064750, Length=251, Percent_Identity=26.2948207171315, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI24430155, Length=251, Percent_Identity=26.2948207171315, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI5901990, Length=265, Percent_Identity=29.0566037735849, Blast_Score=84, Evalue=5e-16,
Organism=Homo sapiens, GI7657689, Length=209, Percent_Identity=29.1866028708134, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI21327685, Length=209, Percent_Identity=29.1866028708134, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI310125280, Length=229, Percent_Identity=30.1310043668122, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI4506209, Length=233, Percent_Identity=28.3261802575107, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI156564401, Length=266, Percent_Identity=27.0676691729323, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI310125282, Length=230, Percent_Identity=30, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI7019569, Length=246, Percent_Identity=28.0487804878049, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI226371754, Length=279, Percent_Identity=28.673835125448, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI17865802, Length=243, Percent_Identity=27.5720164609054, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1789568, Length=220, Percent_Identity=31.3636363636364, Blast_Score=100, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17508053, Length=296, Percent_Identity=31.0810810810811, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17532375, Length=250, Percent_Identity=30.4, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17531535, Length=251, Percent_Identity=29.8804780876494, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI25153574, Length=406, Percent_Identity=26.8472906403941, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71994521, Length=228, Percent_Identity=33.7719298245614, Blast_Score=100, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17554786, Length=219, Percent_Identity=31.0502283105023, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17508701, Length=201, Percent_Identity=31.8407960199005, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI115534323, Length=240, Percent_Identity=30, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI193209502, Length=229, Percent_Identity=28.82096069869, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17562804, Length=171, Percent_Identity=34.5029239766082, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17537217, Length=234, Percent_Identity=29.9145299145299, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI25144278, Length=223, Percent_Identity=30.0448430493274, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI25144281, Length=223, Percent_Identity=30.0448430493274, Blast_Score=92, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17563250, Length=246, Percent_Identity=27.2357723577236, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI71987364, Length=251, Percent_Identity=29.8804780876494, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71987372, Length=251, Percent_Identity=29.8804780876494, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17554264, Length=199, Percent_Identity=29.6482412060301, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI193206114, Length=198, Percent_Identity=29.7979797979798, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI133931034, Length=198, Percent_Identity=29.7979797979798, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193206116, Length=198, Percent_Identity=29.7979797979798, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17554784, Length=258, Percent_Identity=27.906976744186, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17505546, Length=249, Percent_Identity=27.710843373494, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17508421, Length=254, Percent_Identity=31.8897637795276, Blast_Score=79, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI32563584, Length=199, Percent_Identity=34.6733668341709, Blast_Score=79, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17563248, Length=281, Percent_Identity=26.3345195729537, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI86561515, Length=248, Percent_Identity=28.6290322580645, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI133901658, Length=211, Percent_Identity=28.9099526066351, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI133901662, Length=205, Percent_Identity=29.2682926829268, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI25146157, Length=222, Percent_Identity=28.8288288288288, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17541224, Length=227, Percent_Identity=25.5506607929515, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17541226, Length=227, Percent_Identity=25.5506607929515, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320077, Length=227, Percent_Identity=33.4801762114537, Blast_Score=110, Evalue=8e-25,
Organism=Saccharomyces cerevisiae, GI6322994, Length=249, Percent_Identity=28.1124497991968, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6319554, Length=262, Percent_Identity=33.587786259542, Blast_Score=101, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6320854, Length=225, Percent_Identity=30.2222222222222, Blast_Score=98, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6323429, Length=294, Percent_Identity=27.2108843537415, Blast_Score=97, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6322651, Length=255, Percent_Identity=29.8039215686275, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6321390, Length=219, Percent_Identity=30.5936073059361, Blast_Score=95, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6324833, Length=224, Percent_Identity=31.25, Blast_Score=94, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6320602, Length=316, Percent_Identity=26.8987341772152, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6324691, Length=215, Percent_Identity=29.7674418604651, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6323736, Length=225, Percent_Identity=31.5555555555556, Blast_Score=91, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6321709, Length=285, Percent_Identity=27.0175438596491, Blast_Score=90, Evalue=8e-19,
Organism=Saccharomyces cerevisiae, GI6324000, Length=239, Percent_Identity=26.7782426778243, Blast_Score=84, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6320197, Length=256, Percent_Identity=27.34375, Blast_Score=83, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6325281, Length=199, Percent_Identity=28.643216080402, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6322704, Length=223, Percent_Identity=26.457399103139, Blast_Score=72, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6321465, Length=233, Percent_Identity=25.3218884120172, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6325431, Length=207, Percent_Identity=28.9855072463768, Blast_Score=68, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6320887, Length=219, Percent_Identity=26.4840182648402, Blast_Score=67, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6325183, Length=260, Percent_Identity=25, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24660075, Length=238, Percent_Identity=33.1932773109244, Blast_Score=122, Evalue=6e-28,
Organism=Drosophila melanogaster, GI281365776, Length=238, Percent_Identity=33.1932773109244, Blast_Score=122, Evalue=6e-28,
Organism=Drosophila melanogaster, GI45552965, Length=238, Percent_Identity=33.1932773109244, Blast_Score=122, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24639391, Length=256, Percent_Identity=33.59375, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI19921202, Length=277, Percent_Identity=31.4079422382672, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI161076486, Length=227, Percent_Identity=30.3964757709251, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI17137560, Length=227, Percent_Identity=30.3964757709251, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI161076488, Length=227, Percent_Identity=30.3964757709251, Blast_Score=111, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281363136, Length=200, Percent_Identity=32.5, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI78707192, Length=200, Percent_Identity=32.5, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24652279, Length=193, Percent_Identity=31.0880829015544, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24665814, Length=225, Percent_Identity=31.5555555555556, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI28574878, Length=225, Percent_Identity=31.5555555555556, Blast_Score=99, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24656820, Length=364, Percent_Identity=24.1758241758242, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24656825, Length=364, Percent_Identity=24.1758241758242, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI19920408, Length=222, Percent_Identity=31.0810810810811, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24640100, Length=222, Percent_Identity=31.0810810810811, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI17738151, Length=223, Percent_Identity=30.0448430493274, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI281361487, Length=258, Percent_Identity=27.1317829457364, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24651451, Length=238, Percent_Identity=29.4117647058824, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24663015, Length=221, Percent_Identity=28.9592760180996, Blast_Score=87, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24649446, Length=246, Percent_Identity=27.2357723577236, Blast_Score=86, Evalue=9e-17,
Organism=Drosophila melanogaster, GI18860063, Length=258, Percent_Identity=25.1937984496124, Blast_Score=86, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24658770, Length=229, Percent_Identity=29.2576419213974, Blast_Score=86, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21355121, Length=228, Percent_Identity=28.0701754385965, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24581396, Length=323, Percent_Identity=27.2445820433437, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI17137738, Length=233, Percent_Identity=28.755364806867, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI20129529, Length=193, Percent_Identity=29.0155440414508, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24639486, Length=192, Percent_Identity=31.7708333333333, Blast_Score=76, Evalue=7e-14,
Organism=Drosophila melanogaster, GI17864540, Length=215, Percent_Identity=30.2325581395349, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28573010, Length=208, Percent_Identity=29.3269230769231, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI20129423, Length=193, Percent_Identity=26.4248704663212, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI18859657, Length=205, Percent_Identity=29.2682926829268, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI45554047, Length=156, Percent_Identity=31.4102564102564, Blast_Score=71, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24644145, Length=241, Percent_Identity=26.5560165975104, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI28571849, Length=231, Percent_Identity=26.8398268398268, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28571847, Length=231, Percent_Identity=26.8398268398268, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 62391; Mature: 62391

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGYHHFRKEVANYFRARFPFLYISTWEEERVIDQLSHIVSDTELIRTPRTLFVWSLTKG
CCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCHHHHHCCCCEEEEEHHCC
FESNGMPPSAETKDPLKALAFIEKYDQPAVFILKDFYVYLGANNRPPEYRLIRKMKDLVS
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEHEEHHHHEECCCCCCHHHHHHHHHHHHHH
VLEKSLVSKNVVLVAPTLTLPPELEKDITIVEFQLPSFAEIKETLKKMIEMNQGQNRAIV
HHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEE
SLTEDEEERLVKAALGLTLKEAENAFALALVSKGRLDSDSVDQILFEKQQIIKKTGVLEF
EECCCHHHHHHHHHHCCHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IKSEPNIQDVGGLENIKRWLNKRNKSWMDSAQDYGLPSPKGLLLTGVPGCGKSLIAKAVS
HHCCCCCHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHH
SMWKLPLLKLDMGKIFSGIVGSSEENMRNALSTAEAISPSILWVDEIEKGLGNSGTAGDG
HHHCCCCCEECHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCCCCC
GTSKRVLGNFLTWMQEKSKPVFVIATANNIDALPPEFLRKGRFDEIFFVDLPTKKERKEI
CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCCCEEEEEECCCCHHHHHH
FRIHLEKRLTNPKAAGNFSIEPPVLDKLAELTESFIGAEIEQVVISALFEAFSENRSLTV
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEH
EDLEKVIKQTVPLAVTQSEQILAIREWASLRAVSAARQEDLKEYQSIQLKKDDENPRDKD
HHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC
ADLHTSRGGRAVEF
CCCCCCCCCCCCCC
>Mature Secondary Structure
MEGYHHFRKEVANYFRARFPFLYISTWEEERVIDQLSHIVSDTELIRTPRTLFVWSLTKG
CCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCHHHHHCCCCEEEEEHHCC
FESNGMPPSAETKDPLKALAFIEKYDQPAVFILKDFYVYLGANNRPPEYRLIRKMKDLVS
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEHEEHHHHEECCCCCCHHHHHHHHHHHHHH
VLEKSLVSKNVVLVAPTLTLPPELEKDITIVEFQLPSFAEIKETLKKMIEMNQGQNRAIV
HHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEE
SLTEDEEERLVKAALGLTLKEAENAFALALVSKGRLDSDSVDQILFEKQQIIKKTGVLEF
EECCCHHHHHHHHHHCCHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IKSEPNIQDVGGLENIKRWLNKRNKSWMDSAQDYGLPSPKGLLLTGVPGCGKSLIAKAVS
HHCCCCCHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHH
SMWKLPLLKLDMGKIFSGIVGSSEENMRNALSTAEAISPSILWVDEIEKGLGNSGTAGDG
HHHCCCCCEECHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCCCCC
GTSKRVLGNFLTWMQEKSKPVFVIATANNIDALPPEFLRKGRFDEIFFVDLPTKKERKEI
CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCCCEEEEEECCCCHHHHHH
FRIHLEKRLTNPKAAGNFSIEPPVLDKLAELTESFIGAEIEQVVISALFEAFSENRSLTV
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEH
EDLEKVIKQTVPLAVTQSEQILAIREWASLRAVSAARQEDLKEYQSIQLKKDDENPRDKD
HHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC
ADLHTSRGGRAVEF
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9119075; 11029001; 10356978 [H]