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The map label for this gene is yxkD [H]

Identifier: 52787838

GI number: 52787838

Start: 3987888

End: 3988724

Strand: Reverse

Name: yxkD [H]

Synonym: BLi04161

Alternate gene names: 52787838

Gene position: 3988724-3987888 (Counterclockwise)

Preceding gene: 52787845

Following gene: 52787837

Centisome position: 94.46

GC content: 45.64

Gene sequence:

>837_bases
ATGAAAAAGAAAGCAATGGACATAATATTGATCATTATAGGCGCATTTTTCTTTGCGTTAGCCGTGAATCTGTTCGCCAT
CCCGAATGACTTGGGAGAAGGCGGCGTCACGGGGATCACGCTGATTTTATACTACGTTTTTGAATGGTCTCCGGGCATCA
CAAACTTTGTACTGAACGGCATTCTTCTGATTATCGGCTATCGCTTTTTGGATAAAAAGACGACGATTTACACTATTATT
GCGGTGGCGGCCAATTCGTTCTTTCTGCACGTCACCGAAGATTGGACGGTGCCGGCCGATGAAGTGATCATCAGCACCAT
CTTTGCCGGGGTATTTGCCGGCGTCGGAATCGGCATGATCATCCGTGTCGGCGGAACCACCGCCGGGTCTGCGATTCTCG
CGAGAATCGCCAATAAATATTTTGACTGGAACATCAGCTATGCCTTGCTGATGATCGATTTAGTTGTCGTCTTCAGTTCC
TACTTTATCATTGGAGCTGAAAAGCTGATGTTTACGATTGTCATGCTGTACATCGCCACGAAGGTCATGGACTTCATTAT
CGAAGGGCTCAACACGAAAAAGGCGATCACGATTATTTCCGAGCATAAAAACGAGATCGCGGCGCAGGTCAATACCCTGA
TGGACCGCGGCGTCACGATATTATCGGGACGCGGGCACTATACGGGCGACTCCAAAGAAATTTTATACATTGTCATTAAT
AAACAAGAGCTGTCCATGCTGAAGAAAATTATTAGAAGCACAGATAAAAAAGCATTTGTCATCATCCACGATGTCAGGGA
TGTATTCGGCGAGGGATTTGTTGATATTTCAAAATAG

Upstream 100 bases:

>100_bases
AAAAGCCCAGGAGTTTTTGCTCTTAATCAAAGAGCTTCTCTCCTGGGCTTTTTTACTTTTTACAGGAAATCGATTAAGGA
CAAAGGAAGGGGATGTATTT

Downstream 100 bases:

>100_bases
GGGAAGGCTGCCGGCAGATGGCCGGGAGCCTTTTCTGTATTCATTCTGATTAGGGACAGACAAATACATGAAGTTTTATG
CAGGAACTGGTTTCTGTGGT

Product: YxkD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKKKAMDIILIIIGAFFFALAVNLFAIPNDLGEGGVTGITLILYYVFEWSPGITNFVLNGILLIIGYRFLDKKTTIYTII
AVAANSFFLHVTEDWTVPADEVIISTIFAGVFAGVGIGMIIRVGGTTAGSAILARIANKYFDWNISYALLMIDLVVVFSS
YFIIGAEKLMFTIVMLYIATKVMDFIIEGLNTKKAITIISEHKNEIAAQVNTLMDRGVTILSGRGHYTGDSKEILYIVIN
KQELSMLKKIIRSTDKKAFVIIHDVRDVFGEGFVDISK

Sequences:

>Translated_278_residues
MKKKAMDIILIIIGAFFFALAVNLFAIPNDLGEGGVTGITLILYYVFEWSPGITNFVLNGILLIIGYRFLDKKTTIYTII
AVAANSFFLHVTEDWTVPADEVIISTIFAGVFAGVGIGMIIRVGGTTAGSAILARIANKYFDWNISYALLMIDLVVVFSS
YFIIGAEKLMFTIVMLYIATKVMDFIIEGLNTKKAITIISEHKNEIAAQVNTLMDRGVTILSGRGHYTGDSKEILYIVIN
KQELSMLKKIIRSTDKKAFVIIHDVRDVFGEGFVDISK
>Mature_278_residues
MKKKAMDIILIIIGAFFFALAVNLFAIPNDLGEGGVTGITLILYYVFEWSPGITNFVLNGILLIIGYRFLDKKTTIYTII
AVAANSFFLHVTEDWTVPADEVIISTIFAGVFAGVGIGMIIRVGGTTAGSAILARIANKYFDWNISYALLMIDLVVVFSS
YFIIGAEKLMFTIVMLYIATKVMDFIIEGLNTKKAITIISEHKNEIAAQVNTLMDRGVTILSGRGHYTGDSKEILYIVIN
KQELSMLKKIIRSTDKKAFVIIHDVRDVFGEGFVDISK

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 30760; Mature: 30760

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKAMDIILIIIGAFFFALAVNLFAIPNDLGEGGVTGITLILYYVFEWSPGITNFVLNG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
ILLIIGYRFLDKKTTIYTIIAVAANSFFLHVTEDWTVPADEVIISTIFAGVFAGVGIGMI
HHHHHHHHHHCCCHHHHHHHEEHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEE
IRVGGTTAGSAILARIANKYFDWNISYALLMIDLVVVFSSYFIIGAEKLMFTIVMLYIAT
EEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVMDFIIEGLNTKKAITIISEHKNEIAAQVNTLMDRGVTILSGRGHYTGDSKEILYIVIN
HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEEEC
KQELSMLKKIIRSTDKKAFVIIHDVRDVFGEGFVDISK
HHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCEECCC
>Mature Secondary Structure
MKKKAMDIILIIIGAFFFALAVNLFAIPNDLGEGGVTGITLILYYVFEWSPGITNFVLNG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
ILLIIGYRFLDKKTTIYTIIAVAANSFFLHVTEDWTVPADEVIISTIFAGVFAGVGIGMI
HHHHHHHHHHCCCHHHHHHHEEHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEE
IRVGGTTAGSAILARIANKYFDWNISYALLMIDLVVVFSSYFIIGAEKLMFTIVMLYIAT
EEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVMDFIIEGLNTKKAITIISEHKNEIAAQVNTLMDRGVTILSGRGHYTGDSKEILYIVIN
HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEEEC
KQELSMLKKIIRSTDKKAFVIIHDVRDVFGEGFVDISK
HHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]