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The map label for this gene is mocR [H]

Identifier: 52787830

GI number: 52787830

Start: 3977690

End: 3978373

Strand: Reverse

Name: mocR [H]

Synonym: BLi04153

Alternate gene names: 52787830

Gene position: 3978373-3977690 (Counterclockwise)

Preceding gene: 52787831

Following gene: 52787829

Centisome position: 94.22

GC content: 43.57

Gene sequence:

>684_bases
GTGATCTGTTCCGGTACGCAGTATGCAGTCGGACTTCTTTGCCAGCTGCTCTCAATGAACGGCCGATTGGTTGCGTTGGA
AAATCCGGGATATGATGGTGTGCGTTCTGTTTTCCTTAACCATGGATGTGATATTCAGCCAATTGGTCTGGAGACGGATG
GGATCAATTTGACACAGCTTGCTGCAACACGGGCGAAACTCGTTTATATTACGCCATCGCATCAGTTTCCGTATGGAATG
GTTCTGCCGATACAGAAGAGGCTGAAATTGCTTGAATGGGCAAGCCGTGAGAAGGCCTATATTATCGAAGACGACTATGA
CAGCGAATTCCGCTATCAGGGCAGGCCTATTCCATCTTTAAAAGCGCTTGATAAAAAAGAAAATGTCATTTATTTAGGGA
CTTTTTCAAAGTCATTTCTTCCGGGAGCGAGATTGAGTTATATCGTTCTGCCTTCAAAACTGGCGGATGAATTTCAAGAG
AAGCTTGGCCGCTACAGCCAGTCTGCTTCACCCATCATTCAAAAAGCGATGTTTTTATTTAGGAAAGAAGGGTTTTTCGA
AAGGCACATCCGTAAAATGAAAAAAGTATATCAAGAAAAGCACAAAACATTAATATCGGCCATTAAAACGCATTTCGGAA
ATGACGTGGAATCATCGGCGAAAAAGCGGGGCTCCATATTTTGA

Upstream 100 bases:

>100_bases
CGCCCGTATTCGAATTTCATGCTTTGGTTCAGCATGTTTTCTTTAGCTGTGATCTCTCGGGGCTGAACAAAGAGGTGTCC
GCTGTGCACCTGAGCAAATT

Downstream 100 bases:

>100_bases
TGAAGACAGACCGACATGCACAAGACCTCATACATAAAGCGGAAAAACTCGGTGTGAAAGTTTATCCGGTATCCGATTTC
TGGATTAAGCCTCATGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MICSGTQYAVGLLCQLLSMNGRLVALENPGYDGVRSVFLNHGCDIQPIGLETDGINLTQLAATRAKLVYITPSHQFPYGM
VLPIQKRLKLLEWASREKAYIIEDDYDSEFRYQGRPIPSLKALDKKENVIYLGTFSKSFLPGARLSYIVLPSKLADEFQE
KLGRYSQSASPIIQKAMFLFRKEGFFERHIRKMKKVYQEKHKTLISAIKTHFGNDVESSAKKRGSIF

Sequences:

>Translated_227_residues
MICSGTQYAVGLLCQLLSMNGRLVALENPGYDGVRSVFLNHGCDIQPIGLETDGINLTQLAATRAKLVYITPSHQFPYGM
VLPIQKRLKLLEWASREKAYIIEDDYDSEFRYQGRPIPSLKALDKKENVIYLGTFSKSFLPGARLSYIVLPSKLADEFQE
KLGRYSQSASPIIQKAMFLFRKEGFFERHIRKMKKVYQEKHKTLISAIKTHFGNDVESSAKKRGSIF
>Mature_227_residues
MICSGTQYAVGLLCQLLSMNGRLVALENPGYDGVRSVFLNHGCDIQPIGLETDGINLTQLAATRAKLVYITPSHQFPYGM
VLPIQKRLKLLEWASREKAYIIEDDYDSEFRYQGRPIPSLKALDKKENVIYLGTFSKSFLPGARLSYIVLPSKLADEFQE
KLGRYSQSASPIIQKAMFLFRKEGFFERHIRKMKKVYQEKHKTLISAIKTHFGNDVESSAKKRGSIF

Specific function: Could play a regulatory role in the transcription of the moc genes for rhizopine catabolism. Could also have an aminotransferase activity [H]

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790797, Length=231, Percent_Identity=26.4069264069264, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1787710, Length=226, Percent_Identity=25.6637168141593, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25818; Mature: 25818

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICSGTQYAVGLLCQLLSMNGRLVALENPGYDGVRSVFLNHGCDIQPIGLETDGINLTQL
CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHH
AATRAKLVYITPSHQFPYGMVLPIQKRLKLLEWASREKAYIIEDDYDSEFRYQGRPIPSL
HHHHEEEEEEECCCCCCCCEECCHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCCCH
KALDKKENVIYLGTFSKSFLPGARLSYIVLPSKLADEFQEKLGRYSQSASPIIQKAMFLF
HHCCCCCCEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RKEGFFERHIRKMKKVYQEKHKTLISAIKTHFGNDVESSAKKRGSIF
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MICSGTQYAVGLLCQLLSMNGRLVALENPGYDGVRSVFLNHGCDIQPIGLETDGINLTQL
CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHH
AATRAKLVYITPSHQFPYGMVLPIQKRLKLLEWASREKAYIIEDDYDSEFRYQGRPIPSL
HHHHEEEEEEECCCCCCCCEECCHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCCCH
KALDKKENVIYLGTFSKSFLPGARLSYIVLPSKLADEFQEKLGRYSQSASPIIQKAMFLF
HHCCCCCCEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RKEGFFERHIRKMKKVYQEKHKTLISAIKTHFGNDVESSAKKRGSIF
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]