Click here to switch to the map view.

The map label for this gene is yxlD [H]

Identifier: 52787784

GI number: 52787784

Start: 3930613

End: 3930834

Strand: Reverse

Name: yxlD [H]

Synonym: BLi04107

Alternate gene names: 52787784

Gene position: 3930834-3930613 (Counterclockwise)

Preceding gene: 52787785

Following gene: 52787783

Centisome position: 93.09

GC content: 40.09

Gene sequence:

>222_bases
ATGAATCTTGACATGACTCAGGAAAAACTGCTGCTGCTGCTGCTTTGCATTTCACCGCTTTTATTTGCGCAGAGTATCTT
TCTATTTCTTAATGCGAAGAAAAAGGGAGCCAATGCGTGGTTCTGGGGAATATGGGGCTTGATCCAAACACCGATGCCTT
TATTATTCTATTATTTATTTGTTGTAAGGCCGTTTCATAAAAAAAGGAGGCCGTTATCATGA

Upstream 100 bases:

>100_bases
GGCTGTTTTTATCATGGTGCAGGGAGCGGCGCTTATCTTGCTGCCAGCGCTTGCCCTGATAGAAAAAAGGCGGCATACGG
CTGATGAGGAGGCTGATTAA

Downstream 100 bases:

>100_bases
CTGGAGCAGATATACCTTGGGCGCTGCTCGCCCCTTTCATTGTGCTGTCTTTCATTTTAGCAGTGTCCGCATTGGTCAGT
TGCATAAAACAGGAGAAAAC

Product: YxlD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MNLDMTQEKLLLLLLCISPLLFAQSIFLFLNAKKKGANAWFWGIWGLIQTPMPLLFYYLFVVRPFHKKRRPLS

Sequences:

>Translated_73_residues
MNLDMTQEKLLLLLLCISPLLFAQSIFLFLNAKKKGANAWFWGIWGLIQTPMPLLFYYLFVVRPFHKKRRPLS
>Mature_73_residues
MNLDMTQEKLLLLLLCISPLLFAQSIFLFLNAKKKGANAWFWGIWGLIQTPMPLLFYYLFVVRPFHKKRRPLS

Specific function: Together with yxlE, is important for negative regulation of sigma Y activity, being the major negative regulator [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8642; Mature: 8642

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDMTQEKLLLLLLCISPLLFAQSIFLFLNAKKKGANAWFWGIWGLIQTPMPLLFYYLF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
VVRPFHKKRRPLS
HHHHHHHCCCCCC
>Mature Secondary Structure
MNLDMTQEKLLLLLLCISPLLFAQSIFLFLNAKKKGANAWFWGIWGLIQTPMPLLFYYLF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
VVRPFHKKRRPLS
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]