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The map label for this gene is fliD [H]

Identifier: 52787458

GI number: 52787458

Start: 3598997

End: 3600478

Strand: Reverse

Name: fliD [H]

Synonym: BLi03778

Alternate gene names: 52787458

Gene position: 3600478-3598997 (Counterclockwise)

Preceding gene: 52787459

Following gene: 52787457

Centisome position: 85.27

GC content: 45.07

Gene sequence:

>1482_bases
ATGGCGATCAGAATATCAGGATTAGCTTCAGGTATGGATATAGACGACATTGTCAGCAAATTAATGAAGACGGAGCGCGT
CCCGCTTGATAAGCTTACTCAAAAGAAACAGACTTTGGAATGGCAGCGCGACAGCTATCGTGAAATCAATACGAAAATTA
AAGATTTGCAGGAATCCATCAACCTTATGCTCCGTCCCAGCACGTACGGCGCGAAAAAGGTGACAAGCTCTGACGAGTCG
GCGGTTACGGCAACAGGCACCACGAATGCGGCGTCAGGCACGATCCAAGTCAACAAGCTGGCGACTGCGGCCACCTATAA
ATCTTCCAGCCTTTCAGGGTATACCGGGAGCGATCAAACGCTAACTTTCCAAGTGACAGCACCTGGAGAAACGACTGCGA
AAAAAGTTGAAATCAGCGTCAGCAGCACGGATACGCTGGATGACATCGTTTCCAAAGTCAACAAATCAAATTTGGGCGTA
ACCGCTATGAAAGAAAAGATTTATAACGGTTCTGAATATGTAGAAACGATCGCTTTCACATCAAAAGCAACCGGCGCAGG
GGGCAGCATACAGGCAGCTGATGATGCGACGGCGAGCTTTATGTCCAATCAGCTCGGATTTGCGCTTGATGCCGACAACA
AGCTGACAGCCAGCCAAGCCGGCCAAAACGCCGAAGTTGTCATCAACGGATTGCAGATTGAGAAGACAACGAACAACTTT
ACCGTTAATAATGTGACATATCAGTTGAAGAATACGACAAACAGCCCCGTTTCGCTTGATGTAGCGACTGATGTTGACGG
GATTTATGAAAAGATTAAAGACTTTGTCACACAGTACAACGAACTGATCGATATGGTCAACGGCAAGCTCACGGAAAAGA
AATACCGCGACTATACGCCGCTGACAGAAGAACAGAAAAAAGATATGACGGAAAAGCAAATTGAGCTGTGGGAAGAAAAA
GCGAAAAGCGGATTGTTAAGGGGCGACACGATTTTAAGCGGCGCCACCAATCAAATGAGGACAGATTTTTATTCGAATGT
CTCTGTGAACGGCGAATCGCTGCAGCTCACTCAGTTTGGAATTACGACATCAAGCGTATACAGTCAGCGCGGTCATTTAG
AGATCAACGAAGAAAAGCTGAAAGCGAAAATTAAAGAAGACCCTGACAGTGTGGCAAACCTCTTTATGGCGGGAACGAGC
AGCACGGAAAATTACAATGAAAAAGGCATCATGAGACGCCTTCAGACGGTTTTGACCGATACGAAGAAGCAGATTGAAGA
TAAAGCCGGAAATTCAGCAATGGCAAACAATCAATTTACAATCGGGAAAAACTTGAATACAGTTGAATCTGATATTTCGT
CCATGAATAACCGCCTGACACAAATCGAAAATCGCTATTATACAAAGTTCACGGCGATGGAAAAAGCGATTCAAAAAATG
AATGAACAATCGACATACTTGGCGCAATTGCTTGGACAATAA

Upstream 100 bases:

>100_bases
CGAGATTCCGCCAAAGGAGTGGCTCGATTTTTATGCGGCGATGGCGGAATTTATGGGGTTAATTGTCGATAAAACTACAT
AGAACAGGAGTGTTAAAGAT

Downstream 100 bases:

>100_bases
TTGTAATTTGGAGGATCAACAATGGCTTTAAACAATCCGTATGCAGCTTATCAGCAAAATTCAATCAACATGGCGACTCC
TGGAGAATTGACGCTTATGC

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MAIRISGLASGMDIDDIVSKLMKTERVPLDKLTQKKQTLEWQRDSYREINTKIKDLQESINLMLRPSTYGAKKVTSSDES
AVTATGTTNAASGTIQVNKLATAATYKSSSLSGYTGSDQTLTFQVTAPGETTAKKVEISVSSTDTLDDIVSKVNKSNLGV
TAMKEKIYNGSEYVETIAFTSKATGAGGSIQAADDATASFMSNQLGFALDADNKLTASQAGQNAEVVINGLQIEKTTNNF
TVNNVTYQLKNTTNSPVSLDVATDVDGIYEKIKDFVTQYNELIDMVNGKLTEKKYRDYTPLTEEQKKDMTEKQIELWEEK
AKSGLLRGDTILSGATNQMRTDFYSNVSVNGESLQLTQFGITTSSVYSQRGHLEINEEKLKAKIKEDPDSVANLFMAGTS
STENYNEKGIMRRLQTVLTDTKKQIEDKAGNSAMANNQFTIGKNLNTVESDISSMNNRLTQIENRYYTKFTAMEKAIQKM
NEQSTYLAQLLGQ

Sequences:

>Translated_493_residues
MAIRISGLASGMDIDDIVSKLMKTERVPLDKLTQKKQTLEWQRDSYREINTKIKDLQESINLMLRPSTYGAKKVTSSDES
AVTATGTTNAASGTIQVNKLATAATYKSSSLSGYTGSDQTLTFQVTAPGETTAKKVEISVSSTDTLDDIVSKVNKSNLGV
TAMKEKIYNGSEYVETIAFTSKATGAGGSIQAADDATASFMSNQLGFALDADNKLTASQAGQNAEVVINGLQIEKTTNNF
TVNNVTYQLKNTTNSPVSLDVATDVDGIYEKIKDFVTQYNELIDMVNGKLTEKKYRDYTPLTEEQKKDMTEKQIELWEEK
AKSGLLRGDTILSGATNQMRTDFYSNVSVNGESLQLTQFGITTSSVYSQRGHLEINEEKLKAKIKEDPDSVANLFMAGTS
STENYNEKGIMRRLQTVLTDTKKQIEDKAGNSAMANNQFTIGKNLNTVESDISSMNNRLTQIENRYYTKFTAMEKAIQKM
NEQSTYLAQLLGQ
>Mature_492_residues
AIRISGLASGMDIDDIVSKLMKTERVPLDKLTQKKQTLEWQRDSYREINTKIKDLQESINLMLRPSTYGAKKVTSSDESA
VTATGTTNAASGTIQVNKLATAATYKSSSLSGYTGSDQTLTFQVTAPGETTAKKVEISVSSTDTLDDIVSKVNKSNLGVT
AMKEKIYNGSEYVETIAFTSKATGAGGSIQAADDATASFMSNQLGFALDADNKLTASQAGQNAEVVINGLQIEKTTNNFT
VNNVTYQLKNTTNSPVSLDVATDVDGIYEKIKDFVTQYNELIDMVNGKLTEKKYRDYTPLTEEQKKDMTEKQIELWEEKA
KSGLLRGDTILSGATNQMRTDFYSNVSVNGESLQLTQFGITTSSVYSQRGHLEINEEKLKAKIKEDPDSVANLFMAGTSS
TENYNEKGIMRRLQTVLTDTKKQIEDKAGNSAMANNQFTIGKNLNTVESDISSMNNRLTQIENRYYTKFTAMEKAIQKMN
EQSTYLAQLLGQ

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=498, Percent_Identity=25.7028112449799, Blast_Score=90, Evalue=3e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 54229; Mature: 54098

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRISGLASGMDIDDIVSKLMKTERVPLDKLTQKKQTLEWQRDSYREINTKIKDLQESI
CEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NLMLRPSTYGAKKVTSSDESAVTATGTTNAASGTIQVNKLATAATYKSSSLSGYTGSDQT
CEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEHHHCCCCCCCCCCCCCCE
LTFQVTAPGETTAKKVEISVSSTDTLDDIVSKVNKSNLGVTAMKEKIYNGSEYVETIAFT
EEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHH
SKATGAGGSIQAADDATASFMSNQLGFALDADNKLTASQAGQNAEVVINGLQIEKTTNNF
CCCCCCCCCEECCCHHHHHHHHCCCCEEECCCCCEEHHHCCCCCEEEEEEEEEEECCCCE
TVNNVTYQLKNTTNSPVSLDVATDVDGIYEKIKDFVTQYNELIDMVNGKLTEKKYRDYTP
EEEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
LTEEQKKDMTEKQIELWEEKAKSGLLRGDTILSGATNQMRTDFYSNVSVNGESLQLTQFG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHCCCCCCCCEEEEEEEC
ITTSSVYSQRGHLEINEEKLKAKIKEDPDSVANLFMAGTSSTENYNEKGIMRRLQTVLTD
CCHHHHHHCCCCEEECHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
TKKQIEDKAGNSAMANNQFTIGKNLNTVESDISSMNNRLTQIENRYYTKFTAMEKAIQKM
HHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEQSTYLAQLLGQ
CHHHHHHHHHHCC
>Mature Secondary Structure 
AIRISGLASGMDIDDIVSKLMKTERVPLDKLTQKKQTLEWQRDSYREINTKIKDLQESI
EEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NLMLRPSTYGAKKVTSSDESAVTATGTTNAASGTIQVNKLATAATYKSSSLSGYTGSDQT
CEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEHHHCCCCCCCCCCCCCCE
LTFQVTAPGETTAKKVEISVSSTDTLDDIVSKVNKSNLGVTAMKEKIYNGSEYVETIAFT
EEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHH
SKATGAGGSIQAADDATASFMSNQLGFALDADNKLTASQAGQNAEVVINGLQIEKTTNNF
CCCCCCCCCEECCCHHHHHHHHCCCCEEECCCCCEEHHHCCCCCEEEEEEEEEEECCCCE
TVNNVTYQLKNTTNSPVSLDVATDVDGIYEKIKDFVTQYNELIDMVNGKLTEKKYRDYTP
EEEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
LTEEQKKDMTEKQIELWEEKAKSGLLRGDTILSGATNQMRTDFYSNVSVNGESLQLTQFG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHCCCCCCCCEEEEEEEC
ITTSSVYSQRGHLEINEEKLKAKIKEDPDSVANLFMAGTSSTENYNEKGIMRRLQTVLTD
CCHHHHHHCCCCEEECHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
TKKQIEDKAGNSAMANNQFTIGKNLNTVESDISSMNNRLTQIENRYYTKFTAMEKAIQKM
HHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEQSTYLAQLLGQ
CHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8195064; 9384377 [H]