| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is yveM [H]
Identifier: 52787376
GI number: 52787376
Start: 3519321
End: 3521138
Strand: Reverse
Name: yveM [H]
Synonym: BLi03692
Alternate gene names: 52787376
Gene position: 3521138-3519321 (Counterclockwise)
Preceding gene: 52787377
Following gene: 52787375
Centisome position: 83.39
GC content: 48.35
Gene sequence:
>1818_bases TTGACATATCGGAGAAGGCTTTCCATTATTACCGCACTCGATTCGTACTTGGTTTTGCTGTCCATCTTTATCGGATATCA GCTGATTTTGCCATCATATGATTTATACCCTTCGGAAATGCTGCTGATGACTTCACTGATACTGCTTGGCGCTCAGCATT TATTCGCCCATTGCTTCCACCTTTATAAAAAAGTATGGGAGTATGCAAGCATCGGTGAATTGTATGTGCTGCTTAAATCG ATTACATTGTCCCATCTTGTGACGGCGGCCCTCGAGCTGTTTTTCTTTCAAAACGTTCCGGTTCGTCTTTTATGTTTAAG CTGGCTGTTCCAGCTCATTTTGATCGGCGGATCGCGGATGATGTGGCGCATCATCAGGGAACAGGTGAACAAAGAAAGCA AAGGATCTCTAAGGGCGCTTATCATCGGAGCGGGCTCTGCCGGCAGTTTGATTGCAAAACAGCTTGTGCAGAAGCCGGAA TTGAACATTAAGCCCGTCGCCTTTATCGACGATGACAAAACGAAATACCGGCTTGAAATCATGGGTCTGCCCGTCTTAGG CGGGAAAGAGCAGATTATGCAGGCGGTCCGGCAATGGAATATCGACCGGATCATCATCGCCATTCCATCTTTGAGCGTCA CTCAGATGCAGGAAATGTACAAGGCGTGTGCGCAAACAGGTGTCAAAACGCAAATCATGCCGAAAATAGACGAAATTTTG CTTGGCAGACATCCTGTCGGCCAGCTTCGCGATGTCAAAGCAGAAGATTTGCTTGGAAGGGAGCCTGTCCAGCTCGATAC GAGCGAAATCTCCAATACGGTCAAGGACCGCGTCGTACTTGTGACTGGGGCCGGAGGTTCAATCGGCTCGGAAATCTGCC GGCAAATCAGCAAATTTAAACCGAAATCGATCATTTTAGTCGGGCACGGAGAAAACAGCATCCATTCGATCCTGCTTGAA CTGAAGGAGAAATTCGGAAAGCATGTCGCCTATTATCCCGAAATCGCGGACATACAGGACAGAGAAAAAATGTTTTTGCT GATGGAACGCTACAAACCGAATGTCATTTATCATGCAGCTGCCCACAAGCATGTACCGCTGATGGAAAAATGCCCGAAAG AAGCTGTCAAAAACAATATCCTCGGCACGAAAAACGTCGCTGAGGCCGCCGACGAAACCGAAGTGGAGACATTTGTCCTG ATATCGTCAGACAAAGCGGTCAACCCTGCCAATATCATGGGGGCAACGAAGCGGTTCGCGGAAATGCTGATCATGAATCT CGGCAAAACGAGCAAAACCAAATTTGTCGCCGTCCGCTTCGGAAATGTTCTCGGCAGCAGGGGAAGCGTCATTCCGATTT TCAAAAAACAAATCGCTAAAGGCGGCCCGGTCACTGTCACACACCAGGACATGACGAGGTACTTCATGACGATTCCGGAA GCTTCAAGGCTCGTTATTCAAGCGGGGGCGCTTGCCAAAGGAAGACAGATATTCGTGCTCGATATGGGCGAACCGGTCAA AATCGTCGACCTCGCCAAAAATCTTATCCAGCTTTCCGGCTATACGACAGAACAGATCAAAATCGAATTTACAGGCATCC GGCCGGGAGAAAAAATGTACGAAGAGCTGCTGAATCAAAATGAAGTGCTGGCAGAGCAGGTTTTTCCGAAGATTCATATC GGCAAGGCGGTCGACGTCGAATGGACGGTGCTGAAGTCATTTATGGATGAATTTATGTATTTGTCAGACCGCGAGCTGAG AGAACGCTTGTTCAAAGCGATCGGCCAGCACGAGAAAAAGCTGGTGACAGCGCACTAG
Upstream 100 bases:
>100_bases TGCTCGGTTTAAATTTGAAAATCGCCCGTATCTTTTTAGCTCATGGGATTTTGCCCTGAAAGATCCTATCAGCTAGAAAG ATACATTAGGAGGTAGGAAA
Downstream 100 bases:
>100_bases GGGGAAGAACATGACAAGAACGGTTTTGTTTTGCGCTACTGTGGATTACCATTTCAAGGCCTTCCACCTCCCGTATTTAA AATGGTTTAAAGAGCAGGGG
Product: YveM
Products: UDPglucoseal [C]
Alternate protein names: NA
Number of amino acids: Translated: 605; Mature: 604
Protein sequence:
>605_residues MTYRRRLSIITALDSYLVLLSIFIGYQLILPSYDLYPSEMLLMTSLILLGAQHLFAHCFHLYKKVWEYASIGELYVLLKS ITLSHLVTAALELFFFQNVPVRLLCLSWLFQLILIGGSRMMWRIIREQVNKESKGSLRALIIGAGSAGSLIAKQLVQKPE LNIKPVAFIDDDKTKYRLEIMGLPVLGGKEQIMQAVRQWNIDRIIIAIPSLSVTQMQEMYKACAQTGVKTQIMPKIDEIL LGRHPVGQLRDVKAEDLLGREPVQLDTSEISNTVKDRVVLVTGAGGSIGSEICRQISKFKPKSIILVGHGENSIHSILLE LKEKFGKHVAYYPEIADIQDREKMFLLMERYKPNVIYHAAAHKHVPLMEKCPKEAVKNNILGTKNVAEAADETEVETFVL ISSDKAVNPANIMGATKRFAEMLIMNLGKTSKTKFVAVRFGNVLGSRGSVIPIFKKQIAKGGPVTVTHQDMTRYFMTIPE ASRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIQLSGYTTEQIKIEFTGIRPGEKMYEELLNQNEVLAEQVFPKIHI GKAVDVEWTVLKSFMDEFMYLSDRELRERLFKAIGQHEKKLVTAH
Sequences:
>Translated_605_residues MTYRRRLSIITALDSYLVLLSIFIGYQLILPSYDLYPSEMLLMTSLILLGAQHLFAHCFHLYKKVWEYASIGELYVLLKS ITLSHLVTAALELFFFQNVPVRLLCLSWLFQLILIGGSRMMWRIIREQVNKESKGSLRALIIGAGSAGSLIAKQLVQKPE LNIKPVAFIDDDKTKYRLEIMGLPVLGGKEQIMQAVRQWNIDRIIIAIPSLSVTQMQEMYKACAQTGVKTQIMPKIDEIL LGRHPVGQLRDVKAEDLLGREPVQLDTSEISNTVKDRVVLVTGAGGSIGSEICRQISKFKPKSIILVGHGENSIHSILLE LKEKFGKHVAYYPEIADIQDREKMFLLMERYKPNVIYHAAAHKHVPLMEKCPKEAVKNNILGTKNVAEAADETEVETFVL ISSDKAVNPANIMGATKRFAEMLIMNLGKTSKTKFVAVRFGNVLGSRGSVIPIFKKQIAKGGPVTVTHQDMTRYFMTIPE ASRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIQLSGYTTEQIKIEFTGIRPGEKMYEELLNQNEVLAEQVFPKIHI GKAVDVEWTVLKSFMDEFMYLSDRELRERLFKAIGQHEKKLVTAH >Mature_604_residues TYRRRLSIITALDSYLVLLSIFIGYQLILPSYDLYPSEMLLMTSLILLGAQHLFAHCFHLYKKVWEYASIGELYVLLKSI TLSHLVTAALELFFFQNVPVRLLCLSWLFQLILIGGSRMMWRIIREQVNKESKGSLRALIIGAGSAGSLIAKQLVQKPEL NIKPVAFIDDDKTKYRLEIMGLPVLGGKEQIMQAVRQWNIDRIIIAIPSLSVTQMQEMYKACAQTGVKTQIMPKIDEILL GRHPVGQLRDVKAEDLLGREPVQLDTSEISNTVKDRVVLVTGAGGSIGSEICRQISKFKPKSIILVGHGENSIHSILLEL KEKFGKHVAYYPEIADIQDREKMFLLMERYKPNVIYHAAAHKHVPLMEKCPKEAVKNNILGTKNVAEAADETEVETFVLI SSDKAVNPANIMGATKRFAEMLIMNLGKTSKTKFVAVRFGNVLGSRGSVIPIFKKQIAKGGPVTVTHQDMTRYFMTIPEA SRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIQLSGYTTEQIKIEFTGIRPGEKMYEELLNQNEVLAEQVFPKIHIG KAVDVEWTVLKSFMDEFMYLSDRELRERLFKAIGQHEKKLVTAH
Specific function: Involved in biofilm formation [H]
COG id: COG1086
COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR003869 [H]
Pfam domain/function: PF02719 Polysacc_synt_2 [H]
EC number: 5.1.3.2 [C]
Molecular weight: Translated: 68181; Mature: 68050
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYRRRLSIITALDSYLVLLSIFIGYQLILPSYDLYPSEMLLMTSLILLGAQHLFAHCFH CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LYKKVWEYASIGELYVLLKSITLSHLVTAALELFFFQNVPVRLLCLSWLFQLILIGGSRM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH MWRIIREQVNKESKGSLRALIIGAGSAGSLIAKQLVQKPELNIKPVAFIDDDKTKYRLEI HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEE MGLPVLGGKEQIMQAVRQWNIDRIIIAIPSLSVTQMQEMYKACAQTGVKTQIMPKIDEIL EECCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHH LGRHPVGQLRDVKAEDLLGREPVQLDTSEISNTVKDRVVLVTGAGGSIGSEICRQISKFK HCCCCCCHHHCCCHHHHCCCCCCEECHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHCC PKSIILVGHGENSIHSILLELKEKFGKHVAYYPEIADIQDREKMFLLMERYKPNVIYHAA CCEEEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEC AHKHVPLMEKCPKEAVKNNILGTKNVAEAADETEVETFVLISSDKAVNPANIMGATKRFA CCCCCCHHHHCHHHHHHCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH EMLIMNLGKTSKTKFVAVRFGNVLGSRGSVIPIFKKQIAKGGPVTVTHQDMTRYFMTIPE HHHHHHCCCCCCCEEEEEEECHHHCCCCCEEHHHHHHHCCCCCEEEEHHHHHHHHHCCCC ASRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIQLSGYTTEQIKIEFTGIRPGEKMY HHEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHH EELLNQNEVLAEQVFPKIHIGKAVDVEWTVLKSFMDEFMYLSDRELRERLFKAIGQHEKK HHHHCCCHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH LVTAH EECCC >Mature Secondary Structure TYRRRLSIITALDSYLVLLSIFIGYQLILPSYDLYPSEMLLMTSLILLGAQHLFAHCFH CHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LYKKVWEYASIGELYVLLKSITLSHLVTAALELFFFQNVPVRLLCLSWLFQLILIGGSRM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH MWRIIREQVNKESKGSLRALIIGAGSAGSLIAKQLVQKPELNIKPVAFIDDDKTKYRLEI HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEE MGLPVLGGKEQIMQAVRQWNIDRIIIAIPSLSVTQMQEMYKACAQTGVKTQIMPKIDEIL EECCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHH LGRHPVGQLRDVKAEDLLGREPVQLDTSEISNTVKDRVVLVTGAGGSIGSEICRQISKFK HCCCCCCHHHCCCHHHHCCCCCCEECHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHCC PKSIILVGHGENSIHSILLELKEKFGKHVAYYPEIADIQDREKMFLLMERYKPNVIYHAA CCEEEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEC AHKHVPLMEKCPKEAVKNNILGTKNVAEAADETEVETFVLISSDKAVNPANIMGATKRFA CCCCCCHHHHCHHHHHHCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH EMLIMNLGKTSKTKFVAVRFGNVLGSRGSVIPIFKKQIAKGGPVTVTHQDMTRYFMTIPE HHHHHHCCCCCCCEEEEEEECHHHCCCCCEEHHHHHHHCCCCCEEEEHHHHHHHHHCCCC ASRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIQLSGYTTEQIKIEFTGIRPGEKMY HHEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHH EELLNQNEVLAEQVFPKIHIGKAVDVEWTVLKSFMDEFMYLSDRELRERLFKAIGQHEKK HHHHCCCHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH LVTAH EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NAD+ [C]
Metal ions: NA
Kcat value (1/min): 57600 [C]
Specific activity: 233.3
Km value (mM): 0.256 {UDPgalactose}} 0.225 {UDPgalactose}} 0.2 {UDPgalactose}} 0.18 {UDPgalactose}} 0.16 {UDPgalactose}} 0.14 {UDPgalactose}} 0.048 {UDPgalactose}} 0.026 {UDPgalactose}} [C]
Substrates: UDPglucose [C]
Specific reaction: UDPglucose <==> UDPglucoseal [C]
General reaction: Epimerization (specificity for carbon forming a hexosulose) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]