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The map label for this gene is yfeT [C]

Identifier: 52787238

GI number: 52787238

Start: 3393899

End: 3394678

Strand: Direct

Name: yfeT [C]

Synonym: BLi03548

Alternate gene names: 52787238

Gene position: 3393899-3394678 (Clockwise)

Preceding gene: 52787237

Following gene: 52787239

Centisome position: 80.37

GC content: 43.46

Gene sequence:

>780_bases
ATGAAAGACAGCGTGTTTCAAATGACTTCTGACACATATCAATCTCTCAGCGATTCAGAACGGCATTTGCTCGAGTACAT
TTATCAGCACTTAGACGTCATCGCCACTTTATCGATTGTAAAATTAAGCGAGGATGCAAATGTTTCAACAGCCACGATTG
TCAGGTTAATGAAAAAACTCGGATATGACGGCTACACTTCTTTTAAGTATGCATTAAAAGAAAAACACCACCTCGGACAC
GCTCCGCTGATGGATGATATCGACAGCCAAATTAAACAGGCCGTGCTAAAGAATGAAAGAGAAGTTCTGGATACGATTAA
GATGCTTGATATCGGGTTGATCGAAGATGCCATTCAAAAAATCAGCAATGCCGAAAAAGTTTACATCTTCGCAAGAGGAT
TGTCTGAAATGATTGGAACCGAGATGACGATCAAGCTTCAGCTGCTCGGCAAAAACTGCGAGATGCACAGCGACCCGAAT
ATTATCAGAGGAAAGTCAAAAACACTGGCCAAAAAAGACCTCGGCCTTTTTGTTTCCTTGAACGGCGAGACAGAAGAGCT
TGTTGAAGCCGCTCAAAATTTCAAATTGCAAGCCATTTCCACCATTACATTAACGACAAGGATCGATTCGCGTCTTGCGA
AATTATCAGAGATCGTACTGGTCGGGTTTAAAGGGGAACAATCATTTTTTCCCGATTATGAAGTCCGCTCTCGCCTCCCT
CTGCAAGTCCTCTCCCGCATCATGCTGGACTCATATGTCATCCGCACCGCTCATAGCTGA

Upstream 100 bases:

>100_bases
TCCGGCCCTCGAGCCGGATATTCTTATGTAGGAAATGTTTATTTTTTCTCCTTCCCCCTTTCTAAACTGATACAATATGA
CTATAAAAGGGGGTTTTATC

Downstream 100 bases:

>100_bases
AAACCTTTACACAACCTGTAAACATCCCCCCTTTCATCTGTGACATAATGTCTGTGAAGCCACATATAAAGGGGGGATAC
AGCATGATCTATACATGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKDSVFQMTSDTYQSLSDSERHLLEYIYQHLDVIATLSIVKLSEDANVSTATIVRLMKKLGYDGYTSFKYALKEKHHLGH
APLMDDIDSQIKQAVLKNEREVLDTIKMLDIGLIEDAIQKISNAEKVYIFARGLSEMIGTEMTIKLQLLGKNCEMHSDPN
IIRGKSKTLAKKDLGLFVSLNGETEELVEAAQNFKLQAISTITLTTRIDSRLAKLSEIVLVGFKGEQSFFPDYEVRSRLP
LQVLSRIMLDSYVIRTAHS

Sequences:

>Translated_259_residues
MKDSVFQMTSDTYQSLSDSERHLLEYIYQHLDVIATLSIVKLSEDANVSTATIVRLMKKLGYDGYTSFKYALKEKHHLGH
APLMDDIDSQIKQAVLKNEREVLDTIKMLDIGLIEDAIQKISNAEKVYIFARGLSEMIGTEMTIKLQLLGKNCEMHSDPN
IIRGKSKTLAKKDLGLFVSLNGETEELVEAAQNFKLQAISTITLTTRIDSRLAKLSEIVLVGFKGEQSFFPDYEVRSRLP
LQVLSRIMLDSYVIRTAHS
>Mature_259_residues
MKDSVFQMTSDTYQSLSDSERHLLEYIYQHLDVIATLSIVKLSEDANVSTATIVRLMKKLGYDGYTSFKYALKEKHHLGH
APLMDDIDSQIKQAVLKNEREVLDTIKMLDIGLIEDAIQKISNAEKVYIFARGLSEMIGTEMTIKLQLLGKNCEMHSDPN
IIRGKSKTLAKKDLGLFVSLNGETEELVEAAQNFKLQAISTITLTTRIDSRLAKLSEIVLVGFKGEQSFFPDYEVRSRLP
LQVLSRIMLDSYVIRTAHS

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788767, Length=234, Percent_Identity=23.9316239316239, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 29277; Mature: 29277

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDSVFQMTSDTYQSLSDSERHLLEYIYQHLDVIATLSIVKLSEDANVSTATIVRLMKKL
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH
GYDGYTSFKYALKEKHHLGHAPLMDDIDSQIKQAVLKNEREVLDTIKMLDIGLIEDAIQK
CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
ISNAEKVYIFARGLSEMIGTEMTIKLQLLGKNCEMHSDPNIIRGKSKTLAKKDLGLFVSL
HCCCCEEEEEECCHHHHHCCCEEEEEEEECCCCCCCCCCCEECCCCHHHHHHCCCEEEEE
NGETEELVEAAQNFKLQAISTITLTTRIDSRLAKLSEIVLVGFKGEQSFFPDYEVRSRLP
CCCHHHHHHHHHCCEEEEEEEEEEHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHCCCC
LQVLSRIMLDSYVIRTAHS
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKDSVFQMTSDTYQSLSDSERHLLEYIYQHLDVIATLSIVKLSEDANVSTATIVRLMKKL
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH
GYDGYTSFKYALKEKHHLGHAPLMDDIDSQIKQAVLKNEREVLDTIKMLDIGLIEDAIQK
CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
ISNAEKVYIFARGLSEMIGTEMTIKLQLLGKNCEMHSDPNIIRGKSKTLAKKDLGLFVSL
HCCCCEEEEEECCHHHHHCCCEEEEEEEECCCCCCCCCCCEECCCCHHHHHHCCCEEEEE
NGETEELVEAAQNFKLQAISTITLTTRIDSRLAKLSEIVLVGFKGEQSFFPDYEVRSRLP
CCCHHHHHHHHHCCEEEEEEEEEEHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHCCCC
LQVLSRIMLDSYVIRTAHS
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]