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The map label for this gene is padC [H]

Identifier: 52787099

GI number: 52787099

Start: 3254269

End: 3254769

Strand: Direct

Name: padC [H]

Synonym: BLi03407

Alternate gene names: 52787099

Gene position: 3254269-3254769 (Clockwise)

Preceding gene: 52787095

Following gene: 52787102

Centisome position: 77.07

GC content: 43.11

Gene sequence:

>501_bases
ATGAATCAAGATGTAAAAGAGTTTGTAGGAAGCCATATGATCTATACGTATGAAAACGGATGGGAATATGAAATCTACAT
TAAAAATGACCATACCATCGATTACCGCATTCACAGCGGAATGGTTGGGGGACGCTGGGTTCGCGATCAAAAAGCCGATA
TCGTCAAGCTGACTGAAGGCGTCTATAAAGTATCCTGGACAGAACCGACAGGGACTGACGTTTCCTTGAACTTCATGCCG
AATGAAAAGCGGATGCACGGCATCATCTTCTTCCCTAAATGGGTTCATGAACGCCCTGATATTACAGTCTGCTATCAAAA
TGACCATATCGACTTAATGGAGGAATCGCGCGAAAAATATGAGACGTATCCAAAATATGTCGTACCGGAATTCGCCGATA
TCACATTTATTGAAAATGCCGGAATCGATAATGAAGATCTGATTTCAAAAGCCCCTTATCCCGGAATGACGGATGACATC
AGGGCAGGAAAGCGGGTATAA

Upstream 100 bases:

>100_bases
AGTATTTTCGTTTGACATCTTTTTTGACGGCATTTTATAATTATATATGTAAATATCAACATGTTTCGATTTACAATAAA
CAAATAAAGGAGCGGTTCAT

Downstream 100 bases:

>100_bases
AAGGGAAAGTTAATGATATAATGACTGGACTTTTGTTAAGTCATCCAGCAGCGCTTTTATATCATCTTGCGACAAAGGTA
CAAGCATTTGGTCGTAGAGG

Product: PadC

Products: NA

Alternate protein names: PAD [H]

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MNQDVKEFVGSHMIYTYENGWEYEIYIKNDHTIDYRIHSGMVGGRWVRDQKADIVKLTEGVYKVSWTEPTGTDVSLNFMP
NEKRMHGIIFFPKWVHERPDITVCYQNDHIDLMEESREKYETYPKYVVPEFADITFIENAGIDNEDLISKAPYPGMTDDI
RAGKRV

Sequences:

>Translated_166_residues
MNQDVKEFVGSHMIYTYENGWEYEIYIKNDHTIDYRIHSGMVGGRWVRDQKADIVKLTEGVYKVSWTEPTGTDVSLNFMP
NEKRMHGIIFFPKWVHERPDITVCYQNDHIDLMEESREKYETYPKYVVPEFADITFIENAGIDNEDLISKAPYPGMTDDI
RAGKRV
>Mature_166_residues
MNQDVKEFVGSHMIYTYENGWEYEIYIKNDHTIDYRIHSGMVGGRWVRDQKADIVKLTEGVYKVSWTEPTGTDVSLNFMP
NEKRMHGIIFFPKWVHERPDITVCYQNDHIDLMEESREKYETYPKYVVPEFADITFIENAGIDNEDLISKAPYPGMTDDI
RAGKRV

Specific function: Involved in the decarboxylation and detoxification of phenolic derivatives. It is able to catalyze the decarboxylation of ferulic, p-coumaric and caffeic acids [H]

COG id: COG3479

COG function: function code Q; Phenolic acid decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the padC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR008729
- ProDom:   PD022010 [H]

Pfam domain/function: PF05870 PA_decarbox [H]

EC number: NA

Molecular weight: Translated: 19522; Mature: 19522

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQDVKEFVGSHMIYTYENGWEYEIYIKNDHTIDYRIHSGMVGGRWVRDQKADIVKLTEG
CCCHHHHHHCCEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCEEECCCCCCEEEECCC
VYKVSWTEPTGTDVSLNFMPNEKRMHGIIFFPKWVHERPDITVCYQNDHIDLMEESREKY
EEEEEECCCCCCEEEEEECCCCCCEEEEEEEHHHHCCCCCEEEEEECCCCCHHHHHHHHH
ETYPKYVVPEFADITFIENAGIDNEDLISKAPYPGMTDDIRAGKRV
HCCCCEECCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNQDVKEFVGSHMIYTYENGWEYEIYIKNDHTIDYRIHSGMVGGRWVRDQKADIVKLTEG
CCCHHHHHHCCEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCEEECCCCCCEEEECCC
VYKVSWTEPTGTDVSLNFMPNEKRMHGIIFFPKWVHERPDITVCYQNDHIDLMEESREKY
EEEEEECCCCCCEEEEEECCCCCCEEEEEEEHHHHCCCCCEEEEEECCCCCHHHHHHHHH
ETYPKYVVPEFADITFIENAGIDNEDLISKAPYPGMTDDIRAGKRV
HCCCCEECCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9546183; 9384377 [H]