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The map label for this gene is ywnA [H]

Identifier: 52787064

GI number: 52787064

Start: 3217684

End: 3218118

Strand: Direct

Name: ywnA [H]

Synonym: BLi03369

Alternate gene names: 52787064

Gene position: 3217684-3218118 (Clockwise)

Preceding gene: 52787056

Following gene: 52787065

Centisome position: 76.2

GC content: 45.06

Gene sequence:

>435_bases
ATGAAGATCAGCAGCAGATTTACGATAGCCGTACATATGTTATCCTTGATGCACGTCCGAAGCGACCATTTGACATCAGA
GCAAATCGCAGACAGCGTCAATACCAATCCGGTCATCATCCGCCAAATCAGCAGATTGCTGAAAAAAGCGGGCTTGATTG
AAGTAAAGCGCGGCACAGGCGGAGCGCACTTATTACGGGATGCCGGCGCCATTTCTTTGTATGATGTCTATAAAGCTGTC
GAAGTTGTCGGTGAAGGCGAACTGTTTCACACTCACGAAAACCCCAATCCTGATTGCTGGGTTGGCGCGAATATCCACCA
GGTTCTTGAGCTTGTTTTATTAAAAGCGCAAACAGCCATGGAGAATATACTCAAAGAAATGTCTATAAAGGAATTGACTG
ATCTGATCATCCAAAAAAAGAATGCTTCTCAGTGA

Upstream 100 bases:

>100_bases
AAAGCTTTGACAGGGTTTCATATTTCAGCGCCTTTTGAATAAAAAAGATTGACAGCTCCTCCTGTTGTAATTATCATGAT
TACAACAGGAGGGTGGTTTG

Downstream 100 bases:

>100_bases
GGCATGATTTTTTCAACTCGTTGTAATAACTATACTTACAACAAGCATCTGGCACTGTGTTTTTTTCACCTCGTTGTAAT
ATTGTTCATTACAACGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKISSRFTIAVHMLSLMHVRSDHLTSEQIADSVNTNPVIIRQISRLLKKAGLIEVKRGTGGAHLLRDAGAISLYDVYKAV
EVVGEGELFHTHENPNPDCWVGANIHQVLELVLLKAQTAMENILKEMSIKELTDLIIQKKNASQ

Sequences:

>Translated_144_residues
MKISSRFTIAVHMLSLMHVRSDHLTSEQIADSVNTNPVIIRQISRLLKKAGLIEVKRGTGGAHLLRDAGAISLYDVYKAV
EVVGEGELFHTHENPNPDCWVGANIHQVLELVLLKAQTAMENILKEMSIKELTDLIIQKKNASQ
>Mature_144_residues
MKISSRFTIAVHMLSLMHVRSDHLTSEQIADSVNTNPVIIRQISRLLKKAGLIEVKRGTGGAHLLRDAGAISLYDVYKAV
EVVGEGELFHTHENPNPDCWVGANIHQVLELVLLKAQTAMENILKEMSIKELTDLIIQKKNASQ

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16005; Mature: 16005

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISSRFTIAVHMLSLMHVRSDHLTSEQIADSVNTNPVIIRQISRLLKKAGLIEVKRGTG
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCC
GAHLLRDAGAISLYDVYKAVEVVGEGELFHTHENPNPDCWVGANIHQVLELVLLKAQTAM
HHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHH
ENILKEMSIKELTDLIIQKKNASQ
HHHHHHCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKISSRFTIAVHMLSLMHVRSDHLTSEQIADSVNTNPVIIRQISRLLKKAGLIEVKRGTG
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCC
GAHLLRDAGAISLYDVYKAVEVVGEGELFHTHENPNPDCWVGANIHQVLELVLLKAQTAM
HHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHH
ENILKEMSIKELTDLIIQKKNASQ
HHHHHHCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]