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The map label for this gene is ytxB [H]

Identifier: 52786775

GI number: 52786775

Start: 2930381

End: 2931013

Strand: Reverse

Name: ytxB [H]

Synonym: BLi03045

Alternate gene names: 52786775

Gene position: 2931013-2930381 (Counterclockwise)

Preceding gene: 52786776

Following gene: 52786774

Centisome position: 69.41

GC content: 52.29

Gene sequence:

>633_bases
ATGCGAAAAAGAACCTTGGCCAAATGGACGGTAATCGCCGTAATCGCGGCGGCCGGACTATGGCTGAATGCGAAATACCT
GAATCTGAGCCCTGCTCATATAAGAGAAGGCGTCTTATCCTTTGGGATTTTCGCCCCGTTGATCTATATCGGACTATTGA
TGATCCGGCCGTTTTTGCTGCTTCCTGCTTCCGTTTTCGCCGTCAGCGGCGGCCTCGCATTCGGTCCGCTGTTTGGCTCT
TTGTATTCTTTTATCGGTGCGGCAGGCGGTGCATTTTTATCATTCGCTCTTGCATACAGGCTCGGCGGATACTTTCAGCA
CATGCCGCTGAAGCTCGACAGCCTGCGGACGCTTTTGCGGAAAAACGGCTTTTTCTGCATTTTGCTCTTGAGGCTGGCGC
CGATTCATTTTGACGCGGTCAGCTATGCGGCAGGCGTTTCCAAAGTGAAGCCTCTGTCGTTTGCCCTGGCGACGGCCGCG
GGTATCATACCGGGCACCATTATTTTAAACGTGCTCGGGTCAAGCCTCTTGACCGGCGACATCCTAGCGATTGCGGTTAC
AGCCGCAATTTACCTGATATTCATTACAGTGCCGCTTTTGTTCAGAAAAAAAGTGCAGGCGCTCCTCGATTAA

Upstream 100 bases:

>100_bases
TGGAAAGGGTGCTGTATTTAGCGACGCCTGTCCGGCTGGACGGGAAAAACCGGCGTCAGTAATCATTTGACACCGAGCTT
CAATCACGGAGATGAAGAAG

Downstream 100 bases:

>100_bases
GGGCTCATCCTTTTTTACGTCTATTTTATTTGTCACCCCCATATACATGTAACAGATGTTGTTAGGGGGGACAAACATGC
TTGAAATTACATTTGAAGAT

Product: YtxB

Products: NA

Alternate protein names: ORF-213 [H]

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MRKRTLAKWTVIAVIAAAGLWLNAKYLNLSPAHIREGVLSFGIFAPLIYIGLLMIRPFLLLPASVFAVSGGLAFGPLFGS
LYSFIGAAGGAFLSFALAYRLGGYFQHMPLKLDSLRTLLRKNGFFCILLLRLAPIHFDAVSYAAGVSKVKPLSFALATAA
GIIPGTIILNVLGSSLLTGDILAIAVTAAIYLIFITVPLLFRKKVQALLD

Sequences:

>Translated_210_residues
MRKRTLAKWTVIAVIAAAGLWLNAKYLNLSPAHIREGVLSFGIFAPLIYIGLLMIRPFLLLPASVFAVSGGLAFGPLFGS
LYSFIGAAGGAFLSFALAYRLGGYFQHMPLKLDSLRTLLRKNGFFCILLLRLAPIHFDAVSYAAGVSKVKPLSFALATAA
GIIPGTIILNVLGSSLLTGDILAIAVTAAIYLIFITVPLLFRKKVQALLD
>Mature_210_residues
MRKRTLAKWTVIAVIAAAGLWLNAKYLNLSPAHIREGVLSFGIFAPLIYIGLLMIRPFLLLPASVFAVSGGLAFGPLFGS
LYSFIGAAGGAFLSFALAYRLGGYFQHMPLKLDSLRTLLRKNGFFCILLLRLAPIHFDAVSYAAGVSKVKPLSFALATAA
GIIPGTIILNVLGSSLLTGDILAIAVTAAIYLIFITVPLLFRKKVQALLD

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=150, Percent_Identity=32, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788049, Length=187, Percent_Identity=30.4812834224599, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22467; Mature: 22467

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRTLAKWTVIAVIAAAGLWLNAKYLNLSPAHIREGVLSFGIFAPLIYIGLLMIRPFLL
CCCCHHHHHHHHHHHHHHHHHEECEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPASVFAVSGGLAFGPLFGSLYSFIGAAGGAFLSFALAYRLGGYFQHMPLKLDSLRTLLR
HHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KNGFFCILLLRLAPIHFDAVSYAAGVSKVKPLSFALATAAGIIPGTIILNVLGSSLLTGD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILAIAVTAAIYLIFITVPLLFRKKVQALLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKRTLAKWTVIAVIAAAGLWLNAKYLNLSPAHIREGVLSFGIFAPLIYIGLLMIRPFLL
CCCCHHHHHHHHHHHHHHHHHEECEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPASVFAVSGGLAFGPLFGSLYSFIGAAGGAFLSFALAYRLGGYFQHMPLKLDSLRTLLR
HHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KNGFFCILLLRLAPIHFDAVSYAAGVSKVKPLSFALATAAGIIPGTIILNVLGSSLLTGD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILAIAVTAAIYLIFITVPLLFRKKVQALLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3027671; 8969504; 9387221; 9384377 [H]