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The map label for this gene is araA

Identifier: 52786758

GI number: 52786758

Start: 2913865

End: 2915346

Strand: Reverse

Name: araA

Synonym: BLi03028

Alternate gene names: 52786758

Gene position: 2915346-2913865 (Counterclockwise)

Preceding gene: 52786759

Following gene: 52786757

Centisome position: 69.04

GC content: 50.4

Gene sequence:

>1482_bases
TTGATTCAGGCAAAGACGCATGTGTTTTGGTTTGTGACAGGCAGCCAGCATTTATATGGCGAAGAGGCGGTACAAGAGGT
AGAAGAGCATTCCAAAATGATCTGCAACGGATTAAATGACGGAGATTTAAGGTTTCAAGTCGAGTACAAAGCGGTGGCCA
CTTCGCTGGACGGCGTCAGAAAACTGTTTGAAGAGGCGAACCGGGACGAAGAGTGCGCAGGCATCATCACCTGGATGCAT
ACGTTTTCACCGGCCAAAATGTGGATTCCCGGCCTTTCCGAGCTGAATAAGCCGCTGCTCCATTTTCATACCCAGTTTAA
CCGGGACATTCCGTGGGATAAAATCGACATGGATTTCATGAATATTAATCAGTCTGCCCACGGCGACCGCGAATACGGTT
TTATCGGAGCGAGATTGGGCATTCCTCGAAAAGTAATCGCCGGATATTGGGAAGACAGAGAAGTAAAGCGCTCGATCGAC
AAATGGATGAGCGCAGCGGTCGCATATATTGAAAGCCGCCATATCAAAGTCGCCCGATTTGGGGACAACATGCGGAATGT
GGCGGTAACAGAAGGAGATAAGATTGAAGCGCAGATTCAGCTTGGCTGGTCTGTCGACGGATATGGAATCGGCGATCTCG
TCACGGAGATCAATGCTGTATCAGAACAGAGTCTAAGCGAGCTCATCTCCGAATATGAGGAGCTTTATGAGTGGCCGGAA
GGCGAAGCGGCAAGGGAATCCGTCAAGGAGCAGGCGCGGATTGAGCTTGGATTAAAGCGCTTTCTTTCGAGCGGAGGCTA
TACGGCCTTTACGACAACCTTTGAAGACCTCCACGGCATGAAGCAGCTTCCGGGTTTGGCTGTTCAGCGGCTGATGGCTG
AAGGCTATGGCTTTGGAGGAGAAGGAGATTGGAAAACGGCTGCGCTTGTCAGGATGATGAAAATGATGGCCGGCGGAAAA
GAAACGTCATTTATGGAGGATTACACGTACCATTTTGAACCGGGCAATGAAATGATCCTCGGCTCCCACATGCTTGAAGT
GTGCCCTTCGATTGCCGAACACAAACCGAGAATTGAAGTCCATCCGCTGTCAATGGGTGCAAAGGATGATCCGGCGCGGC
TCGTGTTTGACGGAATTGCAGGTCCTGCGGTCAATGTCTCCCTTATTGATTTGGGCGGACGTTTCAGGCTTGTCATCAAT
AAAGTGGAAGCTGTGAAGGTTCCGCATGATATGCCGAATCTTCCGGTGGCGCGCGTACTTTGGAAGCCTCAGCCGTCTCT
GAGAACATCGGCTGAAGCGTGGATTTTGGCTGGCGGTGCTCACCATACATGCCTTTCGTACCAGCTGACAGCCGAGCAGA
TGCTCGATTGGGCCGAAATGTCGGGCATTGAAGCGGTGTTGATCAATCGTGATACAACGATTTTAAATCTTCGCAATGAA
CTCAAATGGAGTGAAGCTGCATATCGGCTTCGCAAGTTTTAA

Upstream 100 bases:

>100_bases
ATACAGTTTGAGATCAAGGTATGATTTATGTTTTTTTGTAAGCGTTTTAATAGTTTGCTATTCTACACAGACACCATAAA
GACGAGGAGGAGGAAGCTAT

Downstream 100 bases:

>100_bases
GGGGGTGAGGACTTATCCCTTACACAATCGGAGTTGACTTTGGAACATTGTCAGGGCGTGCAGTTCTCGTCGATGTCCGG
ACAGGTGAGGAAATCGCGAC

Product: L-arabinose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MIQAKTHVFWFVTGSQHLYGEEAVQEVEEHSKMICNGLNDGDLRFQVEYKAVATSLDGVRKLFEEANRDEECAGIITWMH
TFSPAKMWIPGLSELNKPLLHFHTQFNRDIPWDKIDMDFMNINQSAHGDREYGFIGARLGIPRKVIAGYWEDREVKRSID
KWMSAAVAYIESRHIKVARFGDNMRNVAVTEGDKIEAQIQLGWSVDGYGIGDLVTEINAVSEQSLSELISEYEELYEWPE
GEAARESVKEQARIELGLKRFLSSGGYTAFTTTFEDLHGMKQLPGLAVQRLMAEGYGFGGEGDWKTAALVRMMKMMAGGK
ETSFMEDYTYHFEPGNEMILGSHMLEVCPSIAEHKPRIEVHPLSMGAKDDPARLVFDGIAGPAVNVSLIDLGGRFRLVIN
KVEAVKVPHDMPNLPVARVLWKPQPSLRTSAEAWILAGGAHHTCLSYQLTAEQMLDWAEMSGIEAVLINRDTTILNLRNE
LKWSEAAYRLRKF

Sequences:

>Translated_493_residues
MIQAKTHVFWFVTGSQHLYGEEAVQEVEEHSKMICNGLNDGDLRFQVEYKAVATSLDGVRKLFEEANRDEECAGIITWMH
TFSPAKMWIPGLSELNKPLLHFHTQFNRDIPWDKIDMDFMNINQSAHGDREYGFIGARLGIPRKVIAGYWEDREVKRSID
KWMSAAVAYIESRHIKVARFGDNMRNVAVTEGDKIEAQIQLGWSVDGYGIGDLVTEINAVSEQSLSELISEYEELYEWPE
GEAARESVKEQARIELGLKRFLSSGGYTAFTTTFEDLHGMKQLPGLAVQRLMAEGYGFGGEGDWKTAALVRMMKMMAGGK
ETSFMEDYTYHFEPGNEMILGSHMLEVCPSIAEHKPRIEVHPLSMGAKDDPARLVFDGIAGPAVNVSLIDLGGRFRLVIN
KVEAVKVPHDMPNLPVARVLWKPQPSLRTSAEAWILAGGAHHTCLSYQLTAEQMLDWAEMSGIEAVLINRDTTILNLRNE
LKWSEAAYRLRKF
>Mature_493_residues
MIQAKTHVFWFVTGSQHLYGEEAVQEVEEHSKMICNGLNDGDLRFQVEYKAVATSLDGVRKLFEEANRDEECAGIITWMH
TFSPAKMWIPGLSELNKPLLHFHTQFNRDIPWDKIDMDFMNINQSAHGDREYGFIGARLGIPRKVIAGYWEDREVKRSID
KWMSAAVAYIESRHIKVARFGDNMRNVAVTEGDKIEAQIQLGWSVDGYGIGDLVTEINAVSEQSLSELISEYEELYEWPE
GEAARESVKEQARIELGLKRFLSSGGYTAFTTTFEDLHGMKQLPGLAVQRLMAEGYGFGGEGDWKTAALVRMMKMMAGGK
ETSFMEDYTYHFEPGNEMILGSHMLEVCPSIAEHKPRIEVHPLSMGAKDDPARLVFDGIAGPAVNVSLIDLGGRFRLVIN
KVEAVKVPHDMPNLPVARVLWKPQPSLRTSAEAWILAGGAHHTCLSYQLTAEQMLDWAEMSGIEAVLINRDTTILNLRNE
LKWSEAAYRLRKF

Specific function: Catalyzes the conversion of L-arabinose to L-ribulose

COG id: COG2160

COG function: function code G; L-arabinose isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arabinose isomerase family

Homologues:

Organism=Escherichia coli, GI1786248, Length=491, Percent_Identity=55.6008146639511, Blast_Score=587, Evalue=1e-169,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARAA1_BACLD (Q65GC0)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_080173.1
- RefSeq:   YP_092587.1
- HSSP:   P08202
- ProteinModelPortal:   Q65GC0
- SMR:   Q65GC0
- STRING:   Q65GC0
- EnsemblBacteria:   EBBACT00000057641
- EnsemblBacteria:   EBBACT00000059576
- GeneID:   3028672
- GeneID:   3098584
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi03028
- KEGG:   bli:BL00352
- NMPDR:   fig|279010.5.peg.3376
- eggNOG:   COG2160
- GeneTree:   EBGT00050000001793
- HOGENOM:   HBG297198
- OMA:   EVCPTIA
- ProtClustDB:   PRK02929
- BioCyc:   BLIC279010-1:BLI03028-MONOMER
- BioCyc:   BLIC279010:BL00352-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00519
- InterPro:   IPR004216
- InterPro:   IPR009015
- InterPro:   IPR003762
- PIRSF:   PIRSF001478
- ProDom:   PD018364

Pfam domain/function: PF02610 Arabinose_Isome; SSF50443 Fuc_isomerase_C; SSF53743 Fuc_isomerase_N

EC number: =5.3.1.4

Molecular weight: Translated: 55648; Mature: 55648

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQAKTHVFWFVTGSQHLYGEEAVQEVEEHSKMICNGLNDGDLRFQVEYKAVATSLDGVR
CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHH
KLFEEANRDEECAGIITWMHTFSPAKMWIPGLSELNKPLLHFHTQFNRDIPWDKIDMDFM
HHHHHCCCCCHHHHHHHHHHHCCCHHHCCCCHHHHCCHHHHHHHHCCCCCCCCCCCCHHE
NINQSAHGDREYGFIGARLGIPRKVIAGYWEDREVKRSIDKWMSAAVAYIESRHIKVARF
ECCCCCCCCCCCCEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEC
GDNMRNVAVTEGDKIEAQIQLGWSVDGYGIGDLVTEINAVSEQSLSELISEYEELYEWPE
CCCCCEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GEAARESVKEQARIELGLKRFLSSGGYTAFTTTFEDLHGMKQLPGLAVQRLMAEGYGFGG
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCHHHHHHHHHHCCCCCC
EGDWKTAALVRMMKMMAGGKETSFMEDYTYHFEPGNEMILGSHMLEVCPSIAEHKPRIEV
CCCHHHHHHHHHHHHHCCCCCCCHHHCCEEEECCCCCEEEHHHHHHHCHHHHCCCCCEEE
HPLSMGAKDDPARLVFDGIAGPAVNVSLIDLGGRFRLVINKVEAVKVPHDMPNLPVARVL
EEECCCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEEEEHHEEECCCCCCCCCHHHHE
WKPQPSLRTSAEAWILAGGAHHTCLSYQLTAEQMLDWAEMSGIEAVLINRDTTILNLRNE
ECCCCCCCCCCCEEEEECCCCCEEEEEEECHHHHHHHHHHCCCEEEEEECCCEEEEEHHH
LKWSEAAYRLRKF
CCHHHHHHHHHCC
>Mature Secondary Structure
MIQAKTHVFWFVTGSQHLYGEEAVQEVEEHSKMICNGLNDGDLRFQVEYKAVATSLDGVR
CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHH
KLFEEANRDEECAGIITWMHTFSPAKMWIPGLSELNKPLLHFHTQFNRDIPWDKIDMDFM
HHHHHCCCCCHHHHHHHHHHHCCCHHHCCCCHHHHCCHHHHHHHHCCCCCCCCCCCCHHE
NINQSAHGDREYGFIGARLGIPRKVIAGYWEDREVKRSIDKWMSAAVAYIESRHIKVARF
ECCCCCCCCCCCCEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEC
GDNMRNVAVTEGDKIEAQIQLGWSVDGYGIGDLVTEINAVSEQSLSELISEYEELYEWPE
CCCCCEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GEAARESVKEQARIELGLKRFLSSGGYTAFTTTFEDLHGMKQLPGLAVQRLMAEGYGFGG
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCHHHHHHHHHHCCCCCC
EGDWKTAALVRMMKMMAGGKETSFMEDYTYHFEPGNEMILGSHMLEVCPSIAEHKPRIEV
CCCHHHHHHHHHHHHHCCCCCCCHHHCCEEEECCCCCEEEHHHHHHHCHHHHCCCCCEEE
HPLSMGAKDDPARLVFDGIAGPAVNVSLIDLGGRFRLVINKVEAVKVPHDMPNLPVARVL
EEECCCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEEEEHHEEECCCCCCCCCHHHHE
WKPQPSLRTSAEAWILAGGAHHTCLSYQLTAEQMLDWAEMSGIEAVLINRDTTILNLRNE
ECCCCCCCCCCCEEEEECCCCCEEEEEEECHHHHHHHHHHCCCEEEEEECCCEEEEEHHH
LKWSEAAYRLRKF
CCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA