| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is ysiB [H]
Identifier: 52786732
GI number: 52786732
Start: 2882569
End: 2883345
Strand: Reverse
Name: ysiB [H]
Synonym: BLi03001
Alternate gene names: 52786732
Gene position: 2883345-2882569 (Counterclockwise)
Preceding gene: 52786733
Following gene: 52786731
Centisome position: 68.28
GC content: 49.55
Gene sequence:
>777_bases ATGGCAGCATTATCATACGCCGTAGACGGCCATGTTGCGACGATTACGATTCAGCACCCGCCGGCAAATGCGCTATCGAC GCAAGTGCTTGAAGATCTTTCGGCATGCCTTGATGAACTTTCAGAACGTCAGGATGTCAGAAGCGTCGTTATTCACGGGG AAGGAAGATTTTTCTCGGCAGGCGCTGATATTAAAGAGTTTACATCATTGATGGACGGGTCTGATTATGCAAATTTGGCT GATAAGGGCCAGCAGATTTTCGAAAAAGTAGAATCTTTTCCAAAACCGGTGATCGCCGCGATTCACGGGGCCGCTCTTGG AGGCGGTCTTGAGCTAGCGATGGCATGCCACATCCGGATTGCCGAGGAAAGCGCAAAGCTCGGCCTTCCCGAACTGAATC TCGGAATCATTCCCGGCTTTGCGGGAACGCAGCGCCTTCCCAAGTATGTGGGCACCGCCAAAGCGCTTGAAATGATCGGG ACATCAGAGCCGATATCCGGCAAGGAAGCTTTTGAATACGGTCTTGTCACGATTTTGGCGGCGAATGAAGAAGAAGTGCT GCAAAAGGCAAAAGAGCTCGCACAAAAATTCGCTGAAAAAAGTCCGCAGACGATGGCTTATGTCATTGAACTCCTGAATT CGAGCAAAGTGTATTCGTATGAAGGAGGCCTCAAGCTAGAAGGGAAATACTTCGGCGAAGTGTTCCAATCCGAGGATGCG AAGGAAGGGATTCAGGCATTTCTTGAAAAGCGGAAGCCGCATTTTAAAGGGAAATAA
Upstream 100 bases:
>100_bases TGAATGATCAAAAATACGATCTCCCAAACCTGGCAGACAGCATTCATGAATTGCTGATCCACGGGTTCAGCAGCCAAAAG ACGAAGGAGGAGGAATAAAA
Downstream 100 bases:
>100_bases CAAACGTGAAAACAAAGGGGATGAACAGAACATGAACATTTATGTCTTAATGAAGCGCACGTTTGATACAGAGGAGAAAA TTCAGATCGAACAAGGGGAA
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MAALSYAVDGHVATITIQHPPANALSTQVLEDLSACLDELSERQDVRSVVIHGEGRFFSAGADIKEFTSLMDGSDYANLA DKGQQIFEKVESFPKPVIAAIHGAALGGGLELAMACHIRIAEESAKLGLPELNLGIIPGFAGTQRLPKYVGTAKALEMIG TSEPISGKEAFEYGLVTILAANEEEVLQKAKELAQKFAEKSPQTMAYVIELLNSSKVYSYEGGLKLEGKYFGEVFQSEDA KEGIQAFLEKRKPHFKGK
Sequences:
>Translated_258_residues MAALSYAVDGHVATITIQHPPANALSTQVLEDLSACLDELSERQDVRSVVIHGEGRFFSAGADIKEFTSLMDGSDYANLA DKGQQIFEKVESFPKPVIAAIHGAALGGGLELAMACHIRIAEESAKLGLPELNLGIIPGFAGTQRLPKYVGTAKALEMIG TSEPISGKEAFEYGLVTILAANEEEVLQKAKELAQKFAEKSPQTMAYVIELLNSSKVYSYEGGLKLEGKYFGEVFQSEDA KEGIQAFLEKRKPHFKGK >Mature_257_residues AALSYAVDGHVATITIQHPPANALSTQVLEDLSACLDELSERQDVRSVVIHGEGRFFSAGADIKEFTSLMDGSDYANLAD KGQQIFEKVESFPKPVIAAIHGAALGGGLELAMACHIRIAEESAKLGLPELNLGIIPGFAGTQRLPKYVGTAKALEMIGT SEPISGKEAFEYGLVTILAANEEEVLQKAKELAQKFAEKSPQTMAYVIELLNSSKVYSYEGGLKLEGKYFGEVFQSEDAK EGIQAFLEKRKPHFKGK
Specific function: Involved in the degradation of long-chain fatty acids [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=249, Percent_Identity=38.1526104417671, Blast_Score=151, Evalue=4e-37, Organism=Homo sapiens, GI4502327, Length=239, Percent_Identity=39.3305439330544, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI20127408, Length=209, Percent_Identity=37.799043062201, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI68989263, Length=274, Percent_Identity=31.3868613138686, Blast_Score=126, Evalue=1e-29, Organism=Homo sapiens, GI70995211, Length=254, Percent_Identity=29.5275590551181, Blast_Score=117, Evalue=8e-27, Organism=Homo sapiens, GI31542718, Length=253, Percent_Identity=29.6442687747036, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI150378541, Length=255, Percent_Identity=29.0196078431373, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI157694516, Length=230, Percent_Identity=25.2173913043478, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI213417737, Length=230, Percent_Identity=25.2173913043478, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI157694520, Length=199, Percent_Identity=25.6281407035176, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI261878539, Length=180, Percent_Identity=30.5555555555556, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI4757966, Length=178, Percent_Identity=27.5280898876405, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI51538581, Length=178, Percent_Identity=27.5280898876405, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI25453481, Length=178, Percent_Identity=27.5280898876405, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI51538573, Length=178, Percent_Identity=27.5280898876405, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI62530384, Length=246, Percent_Identity=23.5772357723577, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1787659, Length=259, Percent_Identity=37.4517374517375, Blast_Score=165, Evalue=3e-42, Organism=Escherichia coli, GI1788682, Length=191, Percent_Identity=41.3612565445026, Blast_Score=134, Evalue=6e-33, Organism=Escherichia coli, GI221142681, Length=264, Percent_Identity=32.5757575757576, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI87082183, Length=240, Percent_Identity=30.4166666666667, Blast_Score=117, Evalue=9e-28, Organism=Escherichia coli, GI1790281, Length=179, Percent_Identity=34.0782122905028, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1787660, Length=259, Percent_Identity=30.1158301158301, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1788597, Length=260, Percent_Identity=28.4615384615385, Blast_Score=85, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17554946, Length=255, Percent_Identity=39.2156862745098, Blast_Score=163, Evalue=9e-41, Organism=Caenorhabditis elegans, GI25145438, Length=251, Percent_Identity=36.6533864541833, Blast_Score=152, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17540714, Length=225, Percent_Identity=35.1111111111111, Blast_Score=124, Evalue=7e-29, Organism=Caenorhabditis elegans, GI17558304, Length=172, Percent_Identity=39.5348837209302, Blast_Score=121, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17534483, Length=257, Percent_Identity=26.8482490272374, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17508951, Length=157, Percent_Identity=40.1273885350318, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI25144276, Length=157, Percent_Identity=40.1273885350318, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17508953, Length=157, Percent_Identity=40.1273885350318, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17536985, Length=260, Percent_Identity=25.7692307692308, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17540306, Length=259, Percent_Identity=29.3436293436293, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17560910, Length=246, Percent_Identity=29.2682926829268, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17549921, Length=214, Percent_Identity=28.9719626168224, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI25141363, Length=222, Percent_Identity=26.5765765765766, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17535521, Length=254, Percent_Identity=25.5905511811024, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320241, Length=224, Percent_Identity=26.7857142857143, Blast_Score=76, Evalue=5e-15, Organism=Drosophila melanogaster, GI20129971, Length=247, Percent_Identity=38.0566801619433, Blast_Score=154, Evalue=7e-38, Organism=Drosophila melanogaster, GI24653477, Length=247, Percent_Identity=38.0566801619433, Blast_Score=154, Evalue=7e-38, Organism=Drosophila melanogaster, GI24653139, Length=252, Percent_Identity=34.9206349206349, Blast_Score=135, Evalue=3e-32, Organism=Drosophila melanogaster, GI19920382, Length=252, Percent_Identity=30.952380952381, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI19922422, Length=249, Percent_Identity=27.710843373494, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI19921000, Length=195, Percent_Identity=36.9230769230769, Blast_Score=97, Evalue=9e-21, Organism=Drosophila melanogaster, GI24583077, Length=195, Percent_Identity=36.9230769230769, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24583079, Length=195, Percent_Identity=36.9230769230769, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI19921018, Length=197, Percent_Identity=31.4720812182741, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI21357171, Length=268, Percent_Identity=29.4776119402985, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI24583165, Length=249, Percent_Identity=24.8995983935743, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24650670, Length=175, Percent_Identity=30.8571428571429, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24654903, Length=167, Percent_Identity=28.7425149700599, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 27852; Mature: 27721
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALSYAVDGHVATITIQHPPANALSTQVLEDLSACLDELSERQDVRSVVIHGEGRFFSA CCCCCEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEC GADIKEFTSLMDGSDYANLADKGQQIFEKVESFPKPVIAAIHGAALGGGLELAMACHIRI CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHEEHHHHEEE AEESAKLGLPELNLGIIPGFAGTQRLPKYVGTAKALEMIGTSEPISGKEAFEYGLVTILA ECCHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCEEEEEE ANEEEVLQKAKELAQKFAEKSPQTMAYVIELLNSSKVYSYEGGLKLEGKYFGEVFQSEDA CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCEEECHHHHHHHHCCCCH KEGIQAFLEKRKPHFKGK HHHHHHHHHHCCCCCCCC >Mature Secondary Structure AALSYAVDGHVATITIQHPPANALSTQVLEDLSACLDELSERQDVRSVVIHGEGRFFSA CCCCEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEC GADIKEFTSLMDGSDYANLADKGQQIFEKVESFPKPVIAAIHGAALGGGLELAMACHIRI CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHEEHHHHEEE AEESAKLGLPELNLGIIPGFAGTQRLPKYVGTAKALEMIGTSEPISGKEAFEYGLVTILA ECCHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCEEEEEE ANEEEVLQKAKELAQKFAEKSPQTMAYVIELLNSSKVYSYEGGLKLEGKYFGEVFQSEDA CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCEEECHHHHHHHHCCCCH KEGIQAFLEKRKPHFKGK HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969504; 9384377 [H]