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The map label for this gene is ysmA [H]

Identifier: 52786722

GI number: 52786722

Start: 2872183

End: 2872653

Strand: Reverse

Name: ysmA [H]

Synonym: BLi02991

Alternate gene names: 52786722

Gene position: 2872653-2872183 (Counterclockwise)

Preceding gene: 52786723

Following gene: 52786721

Centisome position: 68.03

GC content: 47.13

Gene sequence:

>471_bases
TTGAAATTGCCGGGATATATCGAAGAACCGTTTGACACATGGTGTCAGTCATTTTCTTTTTTTGATGAAGTTTCCGTCCG
TTTTTCAGAAACGGACATGTTCGGTCATATGAACAATGTCACACCGTTTGTCTACTTCGAAGAAGCGAGGATTTCCTATT
TCAAGCACCTGGGCGTCATGGACCGCCTTTCAGACGGGAAGAGCGCGGCCATTCCCGTCGTGGCGAGCCAGCAATGCGAC
TATTTTCAGCAGGTCATGCTTCATGAACGTTTAAAAATCGGCGTCAAAACAGCATCTGTCGGCAACGCCTCGCTCACCCT
CCATTACGCAGCGAAAAATGGGGAAGGCGGCCTTTGCTTTACAGGACTGGCGGTTATGGTGCAAATTGCGAAAGATACGG
GTAAACCCGTGAAATGGACAGACGAACAAAAAGCAAAACTGCTTGGCAATAACTCATTTCCTGAGAAATAA

Upstream 100 bases:

>100_bases
CGTTTAAAAACTTCTTCGGAAGCGACAACACGGAATAACACGAAAAAACGCACCTCTTCAAACCGAAGAGGTGTTTTCAT
GATCAAAGGGGATGAAAACA

Downstream 100 bases:

>100_bases
TTGACAGGGAGAGGAAAATGAAAAAAGCGATAATCATCGGCGCGAGTTCCGGAATTGGCAATGCGCTTGCCAAGCAGCTG
TCAGCCGGAGGAGTGGAGGT

Product: YsmA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKLPGYIEEPFDTWCQSFSFFDEVSVRFSETDMFGHMNNVTPFVYFEEARISYFKHLGVMDRLSDGKSAAIPVVASQQCD
YFQQVMLHERLKIGVKTASVGNASLTLHYAAKNGEGGLCFTGLAVMVQIAKDTGKPVKWTDEQKAKLLGNNSFPEK

Sequences:

>Translated_156_residues
MKLPGYIEEPFDTWCQSFSFFDEVSVRFSETDMFGHMNNVTPFVYFEEARISYFKHLGVMDRLSDGKSAAIPVVASQQCD
YFQQVMLHERLKIGVKTASVGNASLTLHYAAKNGEGGLCFTGLAVMVQIAKDTGKPVKWTDEQKAKLLGNNSFPEK
>Mature_156_residues
MKLPGYIEEPFDTWCQSFSFFDEVSVRFSETDMFGHMNNVTPFVYFEEARISYFKHLGVMDRLSDGKSAAIPVVASQQCD
YFQQVMLHERLKIGVKTASVGNASLTLHYAAKNGEGGLCFTGLAVMVQIAKDTGKPVKWTDEQKAKLLGNNSFPEK

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 17489; Mature: 17489

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPGYIEEPFDTWCQSFSFFDEVSVRFSETDMFGHMNNVTPFVYFEEARISYFKHLGVM
CCCCCCCCCHHHHHHHHHCCHHHHHEEECCCHHHCCCCCCCEEEEEHHHHHHHHHHHCHH
DRLSDGKSAAIPVVASQQCDYFQQVMLHERLKIGVKTASVGNASLTLHYAAKNGEGGLCF
HHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCEEEECCCCCEEEEEEEEECCCCCCHH
TGLAVMVQIAKDTGKPVKWTDEQKAKLLGNNSFPEK
HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKLPGYIEEPFDTWCQSFSFFDEVSVRFSETDMFGHMNNVTPFVYFEEARISYFKHLGVM
CCCCCCCCCHHHHHHHHHCCHHHHHEEECCCHHHCCCCCCCEEEEEHHHHHHHHHHHCHH
DRLSDGKSAAIPVVASQQCDYFQQVMLHERLKIGVKTASVGNASLTLHYAAKNGEGGLCF
HHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCEEEECCCCCEEEEEEEEECCCCCCHH
TGLAVMVQIAKDTGKPVKWTDEQKAKLLGNNSFPEK
HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3114423; 8969504; 9384377 [H]