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The map label for this gene is ydfG [C]

Identifier: 52786721

GI number: 52786721

Start: 2871467

End: 2872165

Strand: Reverse

Name: ydfG [C]

Synonym: BLi02990

Alternate gene names: 52786721

Gene position: 2872165-2871467 (Counterclockwise)

Preceding gene: 52786722

Following gene: 52786720

Centisome position: 68.02

GC content: 48.5

Gene sequence:

>699_bases
ATGAAAAAAGCGATAATCATCGGCGCGAGTTCCGGAATTGGCAATGCGCTTGCCAAGCAGCTGTCAGCCGGAGGAGTGGA
GGTCGGTCTTGCTGCAAGACGGTATGAGCTGCTAGCCAAATTGCGCGACGACCTCCCTGGACCTTCATACATTAAAAAGA
TCGATACAGCCGACAGCGAACACTCGCCTATACTGTTGAAAGAACTGCTTGATGAGATGAATGGGGCAGACGCAGTCTTC
ATCTGTTCAGGTGTTGGATATTTGGAAAGCGAAATGGATTGGAGCAAAGAAAAGGAAACGATCGATGTCAATGTGACGGG
ATTTGTGTCCTGCTCGAACGTGTTGATGGAGCATTTTATCAAAAACGGGAGAGGGCATTTAGTCGGCATTTCATCCATCG
CCGCGCTGAGAGGAAACGGAGGGGCCGTCACCTACGCCGCTTCAAAAGCATTCGTTTCAAATTATTTAAAAGGACTTCGT
CAAAAAGTGAAAAAACTCGGTTGCGATGAAATTGCGGTCACCGAAATTCAGCCCGGCTTCGTGGACACGGCTCTTGCAAA
AGGTGATCATCTGTTTTGGACGGCTTCGCCCGAAAAAGCGGCTGCACAAATCATCAGCGCTGTGCAGAAGAAGAAGACGC
ACGCATATATTACGAAGAGATGGCGGCTGATCTCCTGGATTTTAAAATGTCTTCCTTAG

Upstream 100 bases:

>100_bases
CGAAAGATACGGGTAAACCCGTGAAATGGACAGACGAACAAAAAGCAAAACTGCTTGGCAATAACTCATTTCCTGAGAAA
TAATTGACAGGGAGAGGAAA

Downstream 100 bases:

>100_bases
AAGTTCAGCCCTGAAACGATGCCTGTGTCATGATTTGAAAAATAGGTGTTTGAGGGAACCCTTTTCTCCGTCAGAAACGT
CACCGACCTTGCGTATGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKKAIIIGASSGIGNALAKQLSAGGVEVGLAARRYELLAKLRDDLPGPSYIKKIDTADSEHSPILLKELLDEMNGADAVF
ICSGVGYLESEMDWSKEKETIDVNVTGFVSCSNVLMEHFIKNGRGHLVGISSIAALRGNGGAVTYAASKAFVSNYLKGLR
QKVKKLGCDEIAVTEIQPGFVDTALAKGDHLFWTASPEKAAAQIISAVQKKKTHAYITKRWRLISWILKCLP

Sequences:

>Translated_232_residues
MKKAIIIGASSGIGNALAKQLSAGGVEVGLAARRYELLAKLRDDLPGPSYIKKIDTADSEHSPILLKELLDEMNGADAVF
ICSGVGYLESEMDWSKEKETIDVNVTGFVSCSNVLMEHFIKNGRGHLVGISSIAALRGNGGAVTYAASKAFVSNYLKGLR
QKVKKLGCDEIAVTEIQPGFVDTALAKGDHLFWTASPEKAAAQIISAVQKKKTHAYITKRWRLISWILKCLP
>Mature_232_residues
MKKAIIIGASSGIGNALAKQLSAGGVEVGLAARRYELLAKLRDDLPGPSYIKKIDTADSEHSPILLKELLDEMNGADAVF
ICSGVGYLESEMDWSKEKETIDVNVTGFVSCSNVLMEHFIKNGRGHLVGISSIAALRGNGGAVTYAASKAFVSNYLKGLR
QKVKKLGCDEIAVTEIQPGFVDTALAKGDHLFWTASPEKAAAQIISAVQKKKTHAYITKRWRLISWILKCLP

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=232, Percent_Identity=29.3103448275862, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI7706318, Length=192, Percent_Identity=28.125, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI1787820, Length=183, Percent_Identity=27.3224043715847, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787335, Length=188, Percent_Identity=27.1276595744681, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=216, Percent_Identity=25.9259259259259, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24580925, Length=193, Percent_Identity=27.979274611399, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21358495, Length=257, Percent_Identity=26.8482490272374, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI116007236, Length=203, Percent_Identity=28.0788177339901, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24648944, Length=194, Percent_Identity=34.020618556701, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI161076933, Length=189, Percent_Identity=26.4550264550265, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24584748, Length=189, Percent_Identity=26.4550264550265, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 25047; Mature: 25047

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAIIIGASSGIGNALAKQLSAGGVEVGLAARRYELLAKLRDDLPGPSYIKKIDTADSE
CCCEEEEECCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
HSPILLKELLDEMNGADAVFICSGVGYLESEMDWSKEKETIDVNVTGFVSCSNVLMEHFI
CCCHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHHHHH
KNGRGHLVGISSIAALRGNGGAVTYAASKAFVSNYLKGLRQKVKKLGCDEIAVTEIQPGF
HCCCCCEEEHHHHHHEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCH
VDTALAKGDHLFWTASPEKAAAQIISAVQKKKTHAYITKRWRLISWILKCLP
HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKAIIIGASSGIGNALAKQLSAGGVEVGLAARRYELLAKLRDDLPGPSYIKKIDTADSE
CCCEEEEECCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
HSPILLKELLDEMNGADAVFICSGVGYLESEMDWSKEKETIDVNVTGFVSCSNVLMEHFI
CCCHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHHHHH
KNGRGHLVGISSIAALRGNGGAVTYAASKAFVSNYLKGLRQKVKKLGCDEIAVTEIQPGF
HCCCCCEEEHHHHHHEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCH
VDTALAKGDHLFWTASPEKAAAQIISAVQKKKTHAYITKRWRLISWILKCLP
HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1730672 [H]