Definition | Bacillus licheniformis ATCC 14580, complete genome. |
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Accession | NC_006322 |
Length | 4,222,645 |
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The map label for this gene is lonA [H]
Identifier: 52786682
GI number: 52786682
Start: 2834199
End: 2836523
Strand: Reverse
Name: lonA [H]
Synonym: BLi02950
Alternate gene names: 52786682
Gene position: 2836523-2834199 (Counterclockwise)
Preceding gene: 52786683
Following gene: 52786681
Centisome position: 67.17
GC content: 49.42
Gene sequence:
>2325_bases ATGGCAGATGAAACGAAACGAAACATCCCGCTCCTCCCTTTAAGAGGTTTACTCGTCTATCCGACGATGGTTTTGCACCT TGACGTCGGGCGTGAAAAGTCGGTTCAGGCACTTGAACAGGCGATGATGAATGACCATATGATCTTTTTGGCAACGCAAA AGGACATATCCATAGACGAACCGGATGAAGACGAGATTTTTACATTCGGAACCTATACGAAAATCAAGCAGATGCTCAAG CTGCCGAACGGAACAATCCGCGTTTTGGTGGAGGGGTTGCAGCGCGCCCGCATTCTTGAGTACCATGACTTAGATGAATA TACGTCTGTAAAAATCGAGCGAATCGATGAAGAGACTGAAAAAGATGTTGAAGATGAAGCACTCATGCGCACATTGCTTG ACCACTTCGATCAATACATAAAGATTTCGAAAAAAATATCGGCGGAAACATTTGCCGCTGTGACAGATATTGAAGAGCCG GGAAGAATGGCCGATATTGTCGCCTCCCACCTCCCGCTCAAGCTGAAAGACAAGCAGGAAGTGCTGGAAACGATCGATGT CAAAGCCAGATTGAACAAAGTAATCGACCTGATTCACAATGAAAAAGAAGTCCTTGAGATTGAAAAGAAGATCGGGCAGC GCGTCAAGCGTTCAATGGAAAGAACACAAAAGGAGTATTACCTGCGCGAGCAGATGAAAGCCATCCAAAAAGAACTTGGC GATAAAGAAGGAAAAACGGGTGAGGTCCAAAAGCTGACTGAAAAAATCGAGCAGGCCGGAATGCCTGACAATGTGAAAGA AACCGCGCTTAAAGAGCTGAACCGGTACGAAAAAATTCCGTCCAGCTCAGCTGAAAGCTCTGTCATCCGCAATTATATCG AATGGCTTATTTCTCTCCCATGGAACGATGCAACAGAAGACAGGCTGGATTTAAAGCTCGCCAGTCAAATTCTCGATGAA GAACACCACGGCCTTGAAAAAGTGAAGGAGCGGGTTCTCGAATATTTGGCTGTCCAGAAGCTGACCCGCTCGTTAAAAGG ACCGATCTTATGCTTGGCCGGCCCTCCGGGTGTTGGAAAAACCTCTCTGGCGAAATCGATCGCCAAATCGCTCGGACGCA AATTCGTCCGCATTTCCCTTGGCGGCGTGAGGGATGAATCTGAAATCCGCGGTCACCGCCGCACATATGTAGGCGCCATG CCGGGCCGTATCATTCAGGGGATGAAAAAAGCAGGCAAGAACAATCCCGTATTCCTTTTGGACGAGATTGACAAAATGGC GTCGGATTTCAGGGGAGATCCCGCTTCAGCGATGCTGGAAGTGCTCGATCCTGAACAAAACCATACGTTCAGCGACCATT ATATTGAAGAGACATTTGACTTATCAAAGGTTTTGTTTATCGCAACCGCGAACAACCTGGCCACAATCCCCGGCCCGCTC AGAGACCGCATGGAGATCATCACGATCGCCGGCTATACGGAAGTGGAAAAGGTCGAAATCGTCAAAGACCATCTGCTTCC AAAACAGCTGAAAGAACACGGTTTGAAAAAATCCAATCTGCAAATACGGGAGCAGGCTGTCCTGGACGTCATTCGCTATT ATACGAGGGAAGCCGGCGTCAGAAATCTTGAACGCCAAATCGCAGCGATATGCAGAAAAGCGGCGAAGCTGATCGTATCA GGGGAAAGAAAAAGAATTACGGTCACAGACAAAAACCTTGAAGACTATTTAGGAAAAAGAATGTTCAGGTACGGACAGGC TGAGCTCGACGATCAGATCGGCGTTGTCACAGGTCTTGCCTACACGACGGTCGGCGGTGATACGCTGTCCATCGAAGTGT CTCTTTCCCCCGGGAAAGGCAAGCTCATTTTGACCGGAAAGCTCGGCGATGTCATGAGAGAGTCGGCGCAGGCCGCATTC AGCTATGTCCGTTCAAAGGCGGAAGAGTTGAACATCAGCCCTGATTTTCACGAAAAACACGATATTCACATTCACGTGCC GGAAGGAGCCGTTCCGAAGGACGGCCCATCCGCGGGGATCACAATGGCGACGGCTCTTGTCTCGGCGCTGACGGGCCGAC CTGTTTCGCGAAATGTCGGCATGACCGGCGAAATCACGTTAAGAGGCCGCGTTCTTCCGATCGGCGGCTTGAAGGAAAAG GCGCTCGGCGCACACCGTGCCGGCTTAAAGACTGTCATTATGCCGAAAGATAATGAAAAAGACATTGAGGACATTCCAAA CAGCGTGCGGGAAGGCTTGACCTTCATTCCCGTCGCTCACCTGGACGAAGTTCTAAAGCATGCGCTAGTAGGAGAAGAGA AATGA
Upstream 100 bases:
>100_bases TACAGGAGACCCTTTTTATTTCGCCGGGCTTACAATTGTACAGGAATAAAAAAAGTATATTATAATGGTTCATACTAAAG TTACGGAGGTGTCAGTCAAA
Downstream 100 bases:
>100_bases AAGTAACGAAATCAGAGATTGTCATCAGTGCGGTGAAACCCGAGCAGTACCCTGAAGGGGGACTGCCGGAAATCGCCCTT GCAGGGAGATCTAATGTCGG
Product: LonA
Products: NA
Alternate protein names: ATP-dependent protease La 1 [H]
Number of amino acids: Translated: 774; Mature: 773
Protein sequence:
>774_residues MADETKRNIPLLPLRGLLVYPTMVLHLDVGREKSVQALEQAMMNDHMIFLATQKDISIDEPDEDEIFTFGTYTKIKQMLK LPNGTIRVLVEGLQRARILEYHDLDEYTSVKIERIDEETEKDVEDEALMRTLLDHFDQYIKISKKISAETFAAVTDIEEP GRMADIVASHLPLKLKDKQEVLETIDVKARLNKVIDLIHNEKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKELG DKEGKTGEVQKLTEKIEQAGMPDNVKETALKELNRYEKIPSSSAESSVIRNYIEWLISLPWNDATEDRLDLKLASQILDE EHHGLEKVKERVLEYLAVQKLTRSLKGPILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRTYVGAM PGRIIQGMKKAGKNNPVFLLDEIDKMASDFRGDPASAMLEVLDPEQNHTFSDHYIEETFDLSKVLFIATANNLATIPGPL RDRMEIITIAGYTEVEKVEIVKDHLLPKQLKEHGLKKSNLQIREQAVLDVIRYYTREAGVRNLERQIAAICRKAAKLIVS GERKRITVTDKNLEDYLGKRMFRYGQAELDDQIGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAF SYVRSKAEELNISPDFHEKHDIHIHVPEGAVPKDGPSAGITMATALVSALTGRPVSRNVGMTGEITLRGRVLPIGGLKEK ALGAHRAGLKTVIMPKDNEKDIEDIPNSVREGLTFIPVAHLDEVLKHALVGEEK
Sequences:
>Translated_774_residues MADETKRNIPLLPLRGLLVYPTMVLHLDVGREKSVQALEQAMMNDHMIFLATQKDISIDEPDEDEIFTFGTYTKIKQMLK LPNGTIRVLVEGLQRARILEYHDLDEYTSVKIERIDEETEKDVEDEALMRTLLDHFDQYIKISKKISAETFAAVTDIEEP GRMADIVASHLPLKLKDKQEVLETIDVKARLNKVIDLIHNEKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKELG DKEGKTGEVQKLTEKIEQAGMPDNVKETALKELNRYEKIPSSSAESSVIRNYIEWLISLPWNDATEDRLDLKLASQILDE EHHGLEKVKERVLEYLAVQKLTRSLKGPILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRTYVGAM PGRIIQGMKKAGKNNPVFLLDEIDKMASDFRGDPASAMLEVLDPEQNHTFSDHYIEETFDLSKVLFIATANNLATIPGPL RDRMEIITIAGYTEVEKVEIVKDHLLPKQLKEHGLKKSNLQIREQAVLDVIRYYTREAGVRNLERQIAAICRKAAKLIVS GERKRITVTDKNLEDYLGKRMFRYGQAELDDQIGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAF SYVRSKAEELNISPDFHEKHDIHIHVPEGAVPKDGPSAGITMATALVSALTGRPVSRNVGMTGEITLRGRVLPIGGLKEK ALGAHRAGLKTVIMPKDNEKDIEDIPNSVREGLTFIPVAHLDEVLKHALVGEEK >Mature_773_residues ADETKRNIPLLPLRGLLVYPTMVLHLDVGREKSVQALEQAMMNDHMIFLATQKDISIDEPDEDEIFTFGTYTKIKQMLKL PNGTIRVLVEGLQRARILEYHDLDEYTSVKIERIDEETEKDVEDEALMRTLLDHFDQYIKISKKISAETFAAVTDIEEPG RMADIVASHLPLKLKDKQEVLETIDVKARLNKVIDLIHNEKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKELGD KEGKTGEVQKLTEKIEQAGMPDNVKETALKELNRYEKIPSSSAESSVIRNYIEWLISLPWNDATEDRLDLKLASQILDEE HHGLEKVKERVLEYLAVQKLTRSLKGPILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRTYVGAMP GRIIQGMKKAGKNNPVFLLDEIDKMASDFRGDPASAMLEVLDPEQNHTFSDHYIEETFDLSKVLFIATANNLATIPGPLR DRMEIITIAGYTEVEKVEIVKDHLLPKQLKEHGLKKSNLQIREQAVLDVIRYYTREAGVRNLERQIAAICRKAAKLIVSG ERKRITVTDKNLEDYLGKRMFRYGQAELDDQIGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFS YVRSKAEELNISPDFHEKHDIHIHVPEGAVPKDGPSAGITMATALVSALTGRPVSRNVGMTGEITLRGRVLPIGGLKEKA LGAHRAGLKTVIMPKDNEKDIEDIPNSVREGLTFIPVAHLDEVLKHALVGEEK
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI31377667, Length=779, Percent_Identity=42.2336328626444, Blast_Score=593, Evalue=1e-169, Organism=Homo sapiens, GI21396489, Length=627, Percent_Identity=43.3811802232855, Blast_Score=546, Evalue=1e-155, Organism=Escherichia coli, GI1786643, Length=765, Percent_Identity=56.7320261437908, Blast_Score=885, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=688, Percent_Identity=40.843023255814, Blast_Score=512, Evalue=1e-145, Organism=Caenorhabditis elegans, GI17556486, Length=763, Percent_Identity=37.0904325032765, Blast_Score=476, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6319449, Length=669, Percent_Identity=40.9566517189836, Blast_Score=523, Evalue=1e-149, Organism=Drosophila melanogaster, GI221513036, Length=625, Percent_Identity=44.16, Blast_Score=538, Evalue=1e-153, Organism=Drosophila melanogaster, GI24666867, Length=625, Percent_Identity=44.16, Blast_Score=538, Evalue=1e-153,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 86863; Mature: 86732
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADETKRNIPLLPLRGLLVYPTMVLHLDVGREKSVQALEQAMMNDHMIFLATQKDISIDE CCCCCCCCCCCCCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC PDEDEIFTFGTYTKIKQMLKLPNGTIRVLVEGLQRARILEYHDLDEYTSVKIERIDEETE CCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHH KDVEDEALMRTLLDHFDQYIKISKKISAETFAAVTDIEEPGRMADIVASHLPLKLKDKQE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCHHH VLETIDVKARLNKVIDLIHNEKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKELG HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DKEGKTGEVQKLTEKIEQAGMPDNVKETALKELNRYEKIPSSSAESSVIRNYIEWLISLP CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC WNDATEDRLDLKLASQILDEEHHGLEKVKERVLEYLAVQKLTRSLKGPILCLAGPPGVGK CCCCCCHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCH TSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGKNNPVFLL HHHHHHHHHHHHHHEEEEEECCCCCHHHHCCCHHHEECCCCHHHHHHHHHCCCCCCEEEE DEIDKMASDFRGDPASAMLEVLDPEQNHTFSDHYIEETFDLSKVLFIATANNLATIPGPL HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCH RDRMEIITIAGYTEVEKVEIVKDHLLPKQLKEHGLKKSNLQIREQAVLDVIRYYTREAGV HCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH RNLERQIAAICRKAAKLIVSGERKRITVTDKNLEDYLGKRMFRYGQAELDDQIGVVTGLA HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHCCCHHHHHHHH YTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKAEELNISPDFHEKH HEEECCCEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DIHIHVPEGAVPKDGPSAGITMATALVSALTGRPVSRNVGMTGEITLRGRVLPIGGLKEK CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCHHH ALGAHRAGLKTVIMPKDNEKDIEDIPNSVREGLTFIPVAHLDEVLKHALVGEEK HHHHHHCCCEEEEECCCCCCHHHHCCHHHHCCCEECCHHHHHHHHHHHHCCCCC >Mature Secondary Structure ADETKRNIPLLPLRGLLVYPTMVLHLDVGREKSVQALEQAMMNDHMIFLATQKDISIDE CCCCCCCCCCCCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC PDEDEIFTFGTYTKIKQMLKLPNGTIRVLVEGLQRARILEYHDLDEYTSVKIERIDEETE CCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHH KDVEDEALMRTLLDHFDQYIKISKKISAETFAAVTDIEEPGRMADIVASHLPLKLKDKQE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCHHH VLETIDVKARLNKVIDLIHNEKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKELG HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DKEGKTGEVQKLTEKIEQAGMPDNVKETALKELNRYEKIPSSSAESSVIRNYIEWLISLP CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC WNDATEDRLDLKLASQILDEEHHGLEKVKERVLEYLAVQKLTRSLKGPILCLAGPPGVGK CCCCCCHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCH TSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGKNNPVFLL HHHHHHHHHHHHHHEEEEEECCCCCHHHHCCCHHHEECCCCHHHHHHHHHCCCCCCEEEE DEIDKMASDFRGDPASAMLEVLDPEQNHTFSDHYIEETFDLSKVLFIATANNLATIPGPL HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCH RDRMEIITIAGYTEVEKVEIVKDHLLPKQLKEHGLKKSNLQIREQAVLDVIRYYTREAGV HCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH RNLERQIAAICRKAAKLIVSGERKRITVTDKNLEDYLGKRMFRYGQAELDDQIGVVTGLA HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHCCCHHHHHHHH YTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKAEELNISPDFHEKH HEEECCCEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DIHIHVPEGAVPKDGPSAGITMATALVSALTGRPVSRNVGMTGEITLRGRVLPIGGLKEK CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCHHH ALGAHRAGLKTVIMPKDNEKDIEDIPNSVREGLTFIPVAHLDEVLKHALVGEEK HHHHHHCCCEEEEECCCCCCHHHHCCHHHHCCCEECCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961402; 8969504; 9384377 [H]