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The map label for this gene is spoIVFB [H]

Identifier: 52786656

GI number: 52786656

Start: 2809100

End: 2809966

Strand: Reverse

Name: spoIVFB [H]

Synonym: BLi02924

Alternate gene names: 52786656

Gene position: 2809966-2809100 (Counterclockwise)

Preceding gene: 52786657

Following gene: 52786655

Centisome position: 66.55

GC content: 48.33

Gene sequence:

>867_bases
TTGAGTAAATGGACGGAGCTCTTCACCAAGCTTCACATTCATCCGCTGCTGTGGCTTGTCATGGCGATCGGTATCATGAC
AGGACATATTAAAGCGCTGTTTTGTTTAATGATCATTATTTTGATCCACGAGCTTGGCCACGCTGCTGCTGCCGTTTATT
TTTCATGGAGAATTAAAGGCATTTTCCTGCTGCCTTTTGGAGGAACGCTGGAAGTCGATGAACACGGCAACAGACCGTTA
AAGGAAGAGCTTGCCGTCATCGCCGCGGGGCCTGTTCAGCACATTTGGCTTCAATTTGCAGCCTGGCTTTTGGCGGTCAA
TTCGCTCATCAGCCCTCATATATTTGAAACGTTTACTTTTTACAATCTGACCATCCTCTTGATAAATCTGTTTCCTATTT
GGCCGCTTGACGGCGGGAAGCTGCTGTTTCTGCTGTTTTCAAAACACCTTCCGTATCAGAAAGCGCAGCGGATGATGCTG
GCTGTATCGTGCTTTTGCTGCGCTGTTCTAATCGCGGCGACTCTGCTGGTCTCCCCGTCGCAGCTGAGCGCTTGGGTGCT
TCTCGTATTTTTGGCTGCATCCCTTTACCAGGAATATCGCAATCGGCATTACGCCCATATCCGTTTTTTGCTTGAGCGCT
ACTATGGAAATGAGAGGGAAGTGCGGCGACTCGCACCGATCACGGTGTGCGCCGAACAGCAGATTTATGAGGTCATGCTC
ATGTTTAAAAGGGGCTGCAAACACCCGATCATTATTGAGAAGGACGGACAAAAACTGAGCCAGCTGGATGAAAATGAAGT
TCTCCACGCTTATTTTACAGACAAGCGCACGACTTCCTCAATGGAAGATCTGCTTCTGGTTTATTGA

Upstream 100 bases:

>100_bases
AAGCTCGGAACGATTGAGCAGGATAAAAATCAAAAAGGCATCTATTACTTTGCGATCAAACAAGGAGAGGAATTTGTTGA
TCCGATACAGGTGATCACAT

Downstream 100 bases:

>100_bases
CCATCCTTCTAAAAGACATTGACACTCGGGCTCTTTTCTGGTATATTTTTTAATGTTATGGATGTAGCACCCGTGCTACA
ACCGCTCAGCACAGGCGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSKWTELFTKLHIHPLLWLVMAIGIMTGHIKALFCLMIIILIHELGHAAAAVYFSWRIKGIFLLPFGGTLEVDEHGNRPL
KEELAVIAAGPVQHIWLQFAAWLLAVNSLISPHIFETFTFYNLTILLINLFPIWPLDGGKLLFLLFSKHLPYQKAQRMML
AVSCFCCAVLIAATLLVSPSQLSAWVLLVFLAASLYQEYRNRHYAHIRFLLERYYGNEREVRRLAPITVCAEQQIYEVML
MFKRGCKHPIIIEKDGQKLSQLDENEVLHAYFTDKRTTSSMEDLLLVY

Sequences:

>Translated_288_residues
MSKWTELFTKLHIHPLLWLVMAIGIMTGHIKALFCLMIIILIHELGHAAAAVYFSWRIKGIFLLPFGGTLEVDEHGNRPL
KEELAVIAAGPVQHIWLQFAAWLLAVNSLISPHIFETFTFYNLTILLINLFPIWPLDGGKLLFLLFSKHLPYQKAQRMML
AVSCFCCAVLIAATLLVSPSQLSAWVLLVFLAASLYQEYRNRHYAHIRFLLERYYGNEREVRRLAPITVCAEQQIYEVML
MFKRGCKHPIIIEKDGQKLSQLDENEVLHAYFTDKRTTSSMEDLLLVY
>Mature_287_residues
SKWTELFTKLHIHPLLWLVMAIGIMTGHIKALFCLMIIILIHELGHAAAAVYFSWRIKGIFLLPFGGTLEVDEHGNRPLK
EELAVIAAGPVQHIWLQFAAWLLAVNSLISPHIFETFTFYNLTILLINLFPIWPLDGGKLLFLLFSKHLPYQKAQRMMLA
VSCFCCAVLIAATLLVSPSQLSAWVLLVFLAASLYQEYRNRHYAHIRFLLERYYGNEREVRRLAPITVCAEQQIYEVMLM
FKRGCKHPIIIEKDGQKLSQLDENEVLHAYFTDKRTTSSMEDLLLVY

Specific function: Implicated in the coupling of mother cell to forespore gene expression. Required for spore formation. Processes the pro- sigma K factor [H]

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Forespore outer membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 33189; Mature: 33058

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKWTELFTKLHIHPLLWLVMAIGIMTGHIKALFCLMIIILIHELGHAAAAVYFSWRIKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
IFLLPFGGTLEVDEHGNRPLKEELAVIAAGPVQHIWLQFAAWLLAVNSLISPHIFETFTF
EEEEECCCEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
YNLTILLINLFPIWPLDGGKLLFLLFSKHLPYQKAQRMMLAVSCFCCAVLIAATLLVSPS
HHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QLSAWVLLVFLAASLYQEYRNRHYAHIRFLLERYYGNEREVRRLAPITVCAEQQIYEVML
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
MFKRGCKHPIIIEKDGQKLSQLDENEVLHAYFTDKRTTSSMEDLLLVY
HHHHCCCCCEEEECCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SKWTELFTKLHIHPLLWLVMAIGIMTGHIKALFCLMIIILIHELGHAAAAVYFSWRIKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
IFLLPFGGTLEVDEHGNRPLKEELAVIAAGPVQHIWLQFAAWLLAVNSLISPHIFETFTF
EEEEECCCEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
YNLTILLINLFPIWPLDGGKLLFLLFSKHLPYQKAQRMMLAVSCFCCAVLIAATLLVSPS
HHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QLSAWVLLVFLAASLYQEYRNRHYAHIRFLLERYYGNEREVRRLAPITVCAEQQIYEVML
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
MFKRGCKHPIIIEKDGQKLSQLDENEVLHAYFTDKRTTSSMEDLLLVY
HHHHCCCCCEEEECCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1942049; 9384377; 10809718 [H]