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The map label for this gene is yrbC [C]

Identifier: 52786641

GI number: 52786641

Start: 2796245

End: 2796967

Strand: Reverse

Name: yrbC [C]

Synonym: BLi02909

Alternate gene names: 52786641

Gene position: 2796967-2796245 (Counterclockwise)

Preceding gene: 52786642

Following gene: 52786640

Centisome position: 66.24

GC content: 45.5

Gene sequence:

>723_bases
ATGGCTGGCCATTCTAAATGGAAAAATATTCAGAGACGAAAAAATGCCCAAGATGCTAAACGCGGCAAAATTTTCATGAA
GCTTGCCAAAGAAATATATGTAGCCGCGAAAGAAGGGGGACCAGATCCCGAATCTAACGCAAGTCTGCGTCTCGTCATCG
ATAAAGCCAAAAATGCAAACATGCCAAATGACAACATCGACCGCGCCATCAAAAAAGCTTCCGGCAGCCAGGATGGAAAA
AGCTATGAGGAAATTACGTATGAGGGCTACGGACCAAGCGGTGTGGCTGTCATGGTCAAATGTTTGACAGATAATAAAAA
CCGGACGGCGACAAGCGTCAGAACCGCTTTCAGCAAAAACGGCGGCAGCTTGGGAGAAACAGGATGCGTTTCTTATATGT
TCGACCGGAAAGGATATATTGCAATCGAACGTGAAGATCTTGAGATAGATGAAGAAGAGTTTATGCTTGAGGTCATTGAT
GCCGGTGCTGAGGAGCTTGAAACGAGCGAAGAGCTGTTCGAGATTTATACAGAGCCCGAACAGTTTGAAGAAGTGAAGAA
AAGCTTGGAGGAGCGCGGCTACAAGCTGGCAACATCCGAAATTACAATGGTTCCGCAAACCTATGCAGAAGTCGATGAAG
CGCTTCAGGAAAAAGTCGAAAAGCTCATTGACGTGCTTGAAGATGATGACGATGTGCAGGAAGTGTATACGAACGTTCAT
TAA

Upstream 100 bases:

>100_bases
CGGCAATTTTTTATAAGCGCTCGGCCGATTCCTTTACAAAAACGGGGAAAACCGTATAAAGTGTACATAGAGACGAGAAT
TATTTTGGAGGTAGAAAGTT

Downstream 100 bases:

>100_bases
AGAAAAGGGCGCCGCTCAAGATTAGCGGTGTCCTTTTATGCTTCATCAAACCATTTAGCAGCCGTATCAAGCTCCAGCGG
AAACATGATTTGATTTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MAGHSKWKNIQRRKNAQDAKRGKIFMKLAKEIYVAAKEGGPDPESNASLRLVIDKAKNANMPNDNIDRAIKKASGSQDGK
SYEEITYEGYGPSGVAVMVKCLTDNKNRTATSVRTAFSKNGGSLGETGCVSYMFDRKGYIAIEREDLEIDEEEFMLEVID
AGAEELETSEELFEIYTEPEQFEEVKKSLEERGYKLATSEITMVPQTYAEVDEALQEKVEKLIDVLEDDDDVQEVYTNVH

Sequences:

>Translated_240_residues
MAGHSKWKNIQRRKNAQDAKRGKIFMKLAKEIYVAAKEGGPDPESNASLRLVIDKAKNANMPNDNIDRAIKKASGSQDGK
SYEEITYEGYGPSGVAVMVKCLTDNKNRTATSVRTAFSKNGGSLGETGCVSYMFDRKGYIAIEREDLEIDEEEFMLEVID
AGAEELETSEELFEIYTEPEQFEEVKKSLEERGYKLATSEITMVPQTYAEVDEALQEKVEKLIDVLEDDDDVQEVYTNVH
>Mature_239_residues
AGHSKWKNIQRRKNAQDAKRGKIFMKLAKEIYVAAKEGGPDPESNASLRLVIDKAKNANMPNDNIDRAIKKASGSQDGKS
YEEITYEGYGPSGVAVMVKCLTDNKNRTATSVRTAFSKNGGSLGETGCVSYMFDRKGYIAIEREDLEIDEEEFMLEVIDA
GAEELETSEELFEIYTEPEQFEEVKKSLEERGYKLATSEITMVPQTYAEVDEALQEKVEKLIDVLEDDDDVQEVYTNVH

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=246, Percent_Identity=30.4878048780488, Blast_Score=134, Evalue=5e-32,
Organism=Escherichia coli, GI1788171, Length=239, Percent_Identity=48.5355648535565, Blast_Score=237, Evalue=6e-64,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=42.5531914893617, Blast_Score=177, Evalue=7e-46,
Organism=Caenorhabditis elegans, GI17556100, Length=247, Percent_Identity=29.1497975708502, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6321458, Length=265, Percent_Identity=36.2264150943396, Blast_Score=134, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24583305, Length=250, Percent_Identity=26.8, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2909_BACLD (Q65GN7)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_080053.1
- RefSeq:   YP_092470.1
- ProteinModelPortal:   Q65GN7
- SMR:   Q65GN7
- STRING:   Q65GN7
- EnsemblBacteria:   EBBACT00000057027
- EnsemblBacteria:   EBBACT00000062136
- GeneID:   3028843
- GeneID:   3098277
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi02909
- KEGG:   bli:BL01150
- NMPDR:   fig|279010.5.peg.3236
- eggNOG:   COG0217
- GeneTree:   EBGT00050000001263
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   BLIC279010-1:BLI02909-MONOMER
- BioCyc:   BLIC279010:BL01150-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26973; Mature: 26842

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWKNIQRRKNAQDAKRGKIFMKLAKEIYVAAKEGGPDPESNASLRLVIDKAKNAN
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCC
MPNDNIDRAIKKASGSQDGKSYEEITYEGYGPSGVAVMVKCLTDNKNRTATSVRTAFSKN
CCCHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCC
GGSLGETGCVSYMFDRKGYIAIEREDLEIDEEEFMLEVIDAGAEELETSEELFEIYTEPE
CCCCCCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH
QFEEVKKSLEERGYKLATSEITMVPQTYAEVDEALQEKVEKLIDVLEDDDDVQEVYTNVH
HHHHHHHHHHHCCCEEECCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
>Mature Secondary Structure 
AGHSKWKNIQRRKNAQDAKRGKIFMKLAKEIYVAAKEGGPDPESNASLRLVIDKAKNAN
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCC
MPNDNIDRAIKKASGSQDGKSYEEITYEGYGPSGVAVMVKCLTDNKNRTATSVRTAFSKN
CCCHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCC
GGSLGETGCVSYMFDRKGYIAIEREDLEIDEEEFMLEVIDAGAEELETSEELFEIYTEPE
CCCCCCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH
QFEEVKKSLEERGYKLATSEITMVPQTYAEVDEALQEKVEKLIDVLEDDDDVQEVYTNVH
HHHHHHHHHHHCCCEEECCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA