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The map label for this gene is yqfO [H]

Identifier: 52786432

GI number: 52786432

Start: 2596397

End: 2597518

Strand: Reverse

Name: yqfO [H]

Synonym: BLi02696

Alternate gene names: 52786432

Gene position: 2597518-2596397 (Counterclockwise)

Preceding gene: 52786433

Following gene: 52786429

Centisome position: 61.51

GC content: 49.2

Gene sequence:

>1122_bases
ATGACAAAAACGATAAACGGGCATGAAATCATTCAATTGTTTGAACAGTTCTCGCCTAAGTCTTTAGCCGTTGAAGGAGA
TAAAATCGGCCTGCAAATCGGCACGCTGAACAAAACGGTGGCCAATGTCATGGTCACGCTTGATGTTCTCGAAGAAACGG
TTGATGAAGCGATCGCAAAGAACGTTGATTTAATTATTGCGCACCATCCCCCTGTTTTCAGGCCGCTGAAACATGTCATC
ACAGATCAGCCCGGCGGAAGGCTGATCGAAAAGTGCATCAAGCATGATATCGCGGTTTATGCGGCTCATACGAATCTCGA
TGTCGCTGACGGCGGTGTCAACGACATGCTAGCGGAAGCGCTGGAATTAAAGAACACAAAAGTTCTGGTTCCAACCTATG
AAGAGCCGCTGAAAAAACTTGCCGTCTATGTCCCGAAAGATTATGAAGAACAGGTACGCACAGCTCTTGGAGACGCTGGA
GCCGGCCATATCGGCGCCTACAGCCACTGTGCGTTTTCTGCAGAAGGAGTCGGCAGCTTCAAGCCGCTATCTGAAGCTGA
TCCGTTTATCGGCAAGCGGGGCGAGCTTGAACGGGTCGAAGAGGTAAGAATCGAGACCGTTTATCCGGCGGGTATTGAAA
AATCCGTGATCAAAGCGATGAGTGAGGCCCATCCGTATGAAGAAGTGGCCTTTGATATTTATCCGGTCGAGCAGAATCCG
CTTCAAAAAGGGCTGGGCCGCATCGGTGAATTGAATGAAGAGATGACACTCGAAGCGTTTGCCCGATATGTGAAGGAAAA
GTTGGAGGCGAACGGAGCGCGGATGGTGGGCAAGTCTGATGCGAAAGTGAAGAAGGTCGCCGTATTAGGCGGTGACGGCA
ACAAATACATCCATCATGCAAAACGTATGGGCGCTGATGTATATGTCACGGGAGACCTGTATTTCCATACGGCGCACGAC
GCCATGATGATCGGGCTGAATGTAGTTGACCCCGGCCATTATGCTGAACAAATCATGAAAAACGGGGTTGCAAAAAAGCT
GACAGCGATGTGCCGGGAGAAAAAATTTGATGTCTCGGTCTTTCCATCGGATACGAATACGAATCCGTTTACGTTTGTAT
AA

Upstream 100 bases:

>100_bases
TCTATCGACAAATTGAAGCGGCTCCTCCGAGTGAAGAAAATCGACAAAAATTGCTTGAGCTGTCAGAACGGATAGAGATC
TTAAAGGAGGTACTTAGAAG

Downstream 100 bases:

>100_bases
AAAACAAAACCTGAAGCTATTAGCGCTTCAGGTTTTTGCTTTTACTTTAGGCAAGATTTTATGCAGCGGTACTTCGTGAC
TGATCTTCCATGTGGACGGA

Product: YqfO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MTKTINGHEIIQLFEQFSPKSLAVEGDKIGLQIGTLNKTVANVMVTLDVLEETVDEAIAKNVDLIIAHHPPVFRPLKHVI
TDQPGGRLIEKCIKHDIAVYAAHTNLDVADGGVNDMLAEALELKNTKVLVPTYEEPLKKLAVYVPKDYEEQVRTALGDAG
AGHIGAYSHCAFSAEGVGSFKPLSEADPFIGKRGELERVEEVRIETVYPAGIEKSVIKAMSEAHPYEEVAFDIYPVEQNP
LQKGLGRIGELNEEMTLEAFARYVKEKLEANGARMVGKSDAKVKKVAVLGGDGNKYIHHAKRMGADVYVTGDLYFHTAHD
AMMIGLNVVDPGHYAEQIMKNGVAKKLTAMCREKKFDVSVFPSDTNTNPFTFV

Sequences:

>Translated_373_residues
MTKTINGHEIIQLFEQFSPKSLAVEGDKIGLQIGTLNKTVANVMVTLDVLEETVDEAIAKNVDLIIAHHPPVFRPLKHVI
TDQPGGRLIEKCIKHDIAVYAAHTNLDVADGGVNDMLAEALELKNTKVLVPTYEEPLKKLAVYVPKDYEEQVRTALGDAG
AGHIGAYSHCAFSAEGVGSFKPLSEADPFIGKRGELERVEEVRIETVYPAGIEKSVIKAMSEAHPYEEVAFDIYPVEQNP
LQKGLGRIGELNEEMTLEAFARYVKEKLEANGARMVGKSDAKVKKVAVLGGDGNKYIHHAKRMGADVYVTGDLYFHTAHD
AMMIGLNVVDPGHYAEQIMKNGVAKKLTAMCREKKFDVSVFPSDTNTNPFTFV
>Mature_372_residues
TKTINGHEIIQLFEQFSPKSLAVEGDKIGLQIGTLNKTVANVMVTLDVLEETVDEAIAKNVDLIIAHHPPVFRPLKHVIT
DQPGGRLIEKCIKHDIAVYAAHTNLDVADGGVNDMLAEALELKNTKVLVPTYEEPLKKLAVYVPKDYEEQVRTALGDAGA
GHIGAYSHCAFSAEGVGSFKPLSEADPFIGKRGELERVEEVRIETVYPAGIEKSVIKAMSEAHPYEEVAFDIYPVEQNPL
QKGLGRIGELNEEMTLEAFARYVKEKLEANGARMVGKSDAKVKKVAVLGGDGNKYIHHAKRMGADVYVTGDLYFHTAHDA
MMIGLNVVDPGHYAEQIMKNGVAKKLTAMCREKKFDVSVFPSDTNTNPFTFV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI209862879, Length=337, Percent_Identity=24.0356083086053, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI215272360, Length=337, Percent_Identity=24.0356083086053, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI56605983, Length=337, Percent_Identity=24.0356083086053, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI215272362, Length=113, Percent_Identity=32.7433628318584, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI19921430, Length=128, Percent_Identity=35.15625, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 40957; Mature: 40826

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTINGHEIIQLFEQFSPKSLAVEGDKIGLQIGTLNKTVANVMVTLDVLEETVDEAIAK
CCCCCCHHHHHHHHHHCCCCEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHC
NVDLIIAHHPPVFRPLKHVITDQPGGRLIEKCIKHDIAVYAAHTNLDVADGGVNDMLAEA
CCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHH
LELKNTKVLVPTYEEPLKKLAVYVPKDYEEQVRTALGDAGAGHIGAYSHCAFSAEGVGSF
HHHCCCEEEECCHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCC
KPLSEADPFIGKRGELERVEEVRIETVYPAGIEKSVIKAMSEAHPYEEVAFDIYPVEQNP
CCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHCCCHHHHEEEEEECCCCH
LQKGLGRIGELNEEMTLEAFARYVKEKLEANGARMVGKSDAKVKKVAVLGGDGNKYIHHA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEECCCCCHHHHHH
KRMGADVYVTGDLYFHTAHDAMMIGLNVVDPGHYAEQIMKNGVAKKLTAMCREKKFDVSV
HHCCCEEEEEEEEEEEECCCEEEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHCCCCEEE
FPSDTNTNPFTFV
ECCCCCCCCEEEC
>Mature Secondary Structure 
TKTINGHEIIQLFEQFSPKSLAVEGDKIGLQIGTLNKTVANVMVTLDVLEETVDEAIAK
CCCCCHHHHHHHHHHCCCCEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHC
NVDLIIAHHPPVFRPLKHVITDQPGGRLIEKCIKHDIAVYAAHTNLDVADGGVNDMLAEA
CCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHH
LELKNTKVLVPTYEEPLKKLAVYVPKDYEEQVRTALGDAGAGHIGAYSHCAFSAEGVGSF
HHHCCCEEEECCHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCC
KPLSEADPFIGKRGELERVEEVRIETVYPAGIEKSVIKAMSEAHPYEEVAFDIYPVEQNP
CCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHCCCHHHHEEEEEECCCCH
LQKGLGRIGELNEEMTLEAFARYVKEKLEANGARMVGKSDAKVKKVAVLGGDGNKYIHHA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEECCCCCHHHHHH
KRMGADVYVTGDLYFHTAHDAMMIGLNVVDPGHYAEQIMKNGVAKKLTAMCREKKFDVSV
HHCCCEEEEEEEEEEEECCCEEEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHCCCCEEE
FPSDTNTNPFTFV
ECCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]