Click here to switch to the map view.

The map label for this gene is efp [H]

Identifier: 52786354

GI number: 52786354

Start: 2532153

End: 2532710

Strand: Reverse

Name: efp [H]

Synonym: BLi02616

Alternate gene names: 52786354

Gene position: 2532710-2532153 (Counterclockwise)

Preceding gene: 52786355

Following gene: 52786353

Centisome position: 59.98

GC content: 45.7

Gene sequence:

>558_bases
ATGATTTCAGTAAACGATTTTCGCACAGGTTTAACGATTGAAGTAGACGGAGGGATTTGGCGCGTTGTTGACTTCCAGCA
CGTTAAGCCGGGAAAAGGCGCGGCATTTGTCCGCTCAAAATTGAGAAATCTTCGCACAGGTGCGATTCAGGAAAAAACAT
TCCGCGCAGGTGAAAAAGTGGCCCGCGCCCAAATTGAAACAAAAACGATGCAGTACTTGTATGCCAACGGCGATCAGCAC
GTTTTTATGGATACGACATCTTACGAGCAGCTTGAGCTGAACGAGAAGCAAATCGAACACGAGCTCAAATTCCTGCTTGA
AAATATGTCTGTTCAGATCATGATGTATCAGACAGAGACGATTGGAATCGAACTTCCGAACACGGTCGAACTGAAAGTTG
TTGAAACAGAACCGGGCATTAAAGGCGACACAGCCTCAGGCGGAACAAAACCAGCAAAAACAGAAACAGGCCTTGTCGTC
AACGTGCCATTCTTCGTAAACGAAGGAGATACGCTTGTTGTCAATACTTCTGACGGTTCTTACGTATCAAGAGCATAA

Upstream 100 bases:

>100_bases
GATATTGTCCTGACAGAGGAAGGAAACGAATCCCTTACCCATTCCGCGAAAGATTTAATTATTTTATAATCCGTTTGATT
GGAGCAATAGGAGGATAATC

Downstream 100 bases:

>100_bases
AGGTAACAGCGGGAAAGAGCCGGCTTCATTGAAGCCGGCTCTTTTTTTGCTGTCTGAAATCTTTTACCTCTCACATGCCA
AATAGAAAAATCGGAAGACT

Product: elongation factor P

Products: NA

Alternate protein names: EF-P [H]

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MISVNDFRTGLTIEVDGGIWRVVDFQHVKPGKGAAFVRSKLRNLRTGAIQEKTFRAGEKVARAQIETKTMQYLYANGDQH
VFMDTTSYEQLELNEKQIEHELKFLLENMSVQIMMYQTETIGIELPNTVELKVVETEPGIKGDTASGGTKPAKTETGLVV
NVPFFVNEGDTLVVNTSDGSYVSRA

Sequences:

>Translated_185_residues
MISVNDFRTGLTIEVDGGIWRVVDFQHVKPGKGAAFVRSKLRNLRTGAIQEKTFRAGEKVARAQIETKTMQYLYANGDQH
VFMDTTSYEQLELNEKQIEHELKFLLENMSVQIMMYQTETIGIELPNTVELKVVETEPGIKGDTASGGTKPAKTETGLVV
NVPFFVNEGDTLVVNTSDGSYVSRA
>Mature_185_residues
MISVNDFRTGLTIEVDGGIWRVVDFQHVKPGKGAAFVRSKLRNLRTGAIQEKTFRAGEKVARAQIETKTMQYLYANGDQH
VFMDTTSYEQLELNEKQIEHELKFLLENMSVQIMMYQTETIGIELPNTVELKVVETEPGIKGDTASGGTKPAKTETGLVV
NVPFFVNEGDTLVVNTSDGSYVSRA

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family [H]

Homologues:

Organism=Escherichia coli, GI1790590, Length=180, Percent_Identity=43.8888888888889, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI87082061, Length=189, Percent_Identity=31.7460317460317, Blast_Score=111, Evalue=3e-26,

Paralogues:

None

Copy number: 1600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR013852
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C [H]

EC number: NA

Molecular weight: Translated: 20592; Mature: 20592

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVNDFRTGLTIEVDGGIWRVVDFQHVKPGKGAAFVRSKLRNLRTGAIQEKTFRAGEKV
CCCCCCCCCCEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
ARAQIETKTMQYLYANGDQHVFMDTTSYEQLELNEKQIEHELKFLLENMSVQIMMYQTET
HHHHHHHHEEEEEEECCCCEEEEECCCCCEEECCHHHHHHHHHHHHHCCCEEEEEEEEEE
IGIELPNTVELKVVETEPGIKGDTASGGTKPAKTETGLVVNVPFFVNEGDTLVVNTSDGS
EEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCEEEEECCCCC
YVSRA
EEECC
>Mature Secondary Structure
MISVNDFRTGLTIEVDGGIWRVVDFQHVKPGKGAAFVRSKLRNLRTGAIQEKTFRAGEKV
CCCCCCCCCCEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
ARAQIETKTMQYLYANGDQHVFMDTTSYEQLELNEKQIEHELKFLLENMSVQIMMYQTET
HHHHHHHHEEEEEEECCCCEEEEECCCCCEEECCHHHHHHHHHHHHHCCCEEEEEEEEEE
IGIELPNTVELKVVETEPGIKGDTASGGTKPAKTETGLVVNVPFFVNEGDTLVVNTSDGS
EEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCEEEEECCCCC
YVSRA
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA