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The map label for this gene is ydhM [H]

Identifier: 52786302

GI number: 52786302

Start: 2482497

End: 2482805

Strand: Reverse

Name: ydhM [H]

Synonym: BLi02564

Alternate gene names: 52786302

Gene position: 2482805-2482497 (Counterclockwise)

Preceding gene: 52786303

Following gene: 52786301

Centisome position: 58.8

GC content: 48.22

Gene sequence:

>309_bases
ATGAAGAAAATTTTACTCGCATGCAGCTCTGGAATGTCGACAAGTCTCCTGGTTACCAAGATGCAGGAATACGCGCATTC
AATCGGTGACGAGGCAAAAATTTGGGCGGTCGGACAGGACCAGGCGAAAAAAGAGATGGCAGAGGCGAACGTCGTTCTCA
TCGGCCCGCAAATGAGCTTTTTAAAAGGCGAGCTGCAGAAGGAAGCTGAACAGTACGGTATTAAGGTTGATGTGATTGAT
ATGCTGGCTTACGGAATGGCTGATGGAAAGAAAGCTTATGAACAGGCGCTAAGCCTGATCGGGGATTGA

Upstream 100 bases:

>100_bases
ATAAATACATACATTTATTTTTAAATGTCTAGACATTTAAAAATAAAAAGATATAATAATAGTTGTGTGAAAGCGCTTTT
AATAAAGGGAGGAGATCACC

Downstream 100 bases:

>100_bases
CGATAATGGAAAAATTAAAGCTCGATGAATTAACAGGCGAACAAATTTGCTTTCAGCTCATTCTTCACAGCGGAAACGCC
CGCAGCAAGGTTATTCAGTC

Product: YdhM

Products: NA

Alternate protein names: Glucomannan utilization protein B; PTS system oligo-beta-mannoside-specific EIIB component [H]

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MKKILLACSSGMSTSLLVTKMQEYAHSIGDEAKIWAVGQDQAKKEMAEANVVLIGPQMSFLKGELQKEAEQYGIKVDVID
MLAYGMADGKKAYEQALSLIGD

Sequences:

>Translated_102_residues
MKKILLACSSGMSTSLLVTKMQEYAHSIGDEAKIWAVGQDQAKKEMAEANVVLIGPQMSFLKGELQKEAEQYGIKVDVID
MLAYGMADGKKAYEQALSLIGD
>Mature_102_residues
MKKILLACSSGMSTSLLVTKMQEYAHSIGDEAKIWAVGQDQAKKEMAEANVVLIGPQMSFLKGELQKEAEQYGIKVDVID
MLAYGMADGKKAYEQALSLIGD

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1440

COG function: function code G; Phosphotransferase system cellobiose-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788034, Length=88, Percent_Identity=42.0454545454545, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003501
- InterPro:   IPR013012 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 11101; Mature: 11101

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILLACSSGMSTSLLVTKMQEYAHSIGDEAKIWAVGQDQAKKEMAEANVVLIGPQMSF
CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCEEEECCCHHH
LKGELQKEAEQYGIKVDVIDMLAYGMADGKKAYEQALSLIGD
HHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKKILLACSSGMSTSLLVTKMQEYAHSIGDEAKIWAVGQDQAKKEMAEANVVLIGPQMSF
CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCEEEECCCHHH
LKGELQKEAEQYGIKVDVIDMLAYGMADGKKAYEQALSLIGD
HHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]