BacMap

Definition	Bacillus licheniformis ATCC 14580, complete genome.
Accession	NC_006322
Length	4,222,645

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The map label for this gene is srtF [H]

Identifier: 52786280

GI number: 52786280

Start: 2461097

End: 2461759

Strand: Reverse

Name: srtF [H]

Synonym: BLi02542

Alternate gene names: 52786280

Gene position: 2461759-2461097 (Counterclockwise)

Preceding gene: 52786281

Following gene: 52786279

Centisome position: 58.3

GC content: 42.99

Gene sequence:

>663_bases
TTGATCAAAATCGATGACCTGACGAAATCTTATGGAAGCAAATCGGTATTCAACCGTCTCAACATGAATATTGAAAAAAA
CAAAGTCACCTTTCTGATGGGAGAAAACGGCGCCGGAAAAACGACGCTCTTGAAATGCCTGCTCAAGCTTGAACCTTTCG
AAGGCGGCATACTGTACGACGGCGAGCCGCTTGAAGCAGTCAGGAGCAAAGTCCACGTCATCTATGACGATTCCCCGTTT
TACGATCATCTGAGCGGCTATCAAAATATCAAACTACTGATCAATAAACCTGCCGGCAAAGAAGAGCTTGAACAATTGTC
GCAAAAGTTTCTCGGCAGGGAGCTGCTGAAAAAAAAGGTCAAGACCTATTCATACGGACAAAAGAAAAAGCTGGCCTTAA
TGATCGCTGCATTAAACAAACCGTCATTCTTGTTTTTGGATGAGATATCAAACGGGCTTGACTACCGGTCCATGATGGAG
CTTCAGGAGCTCATCAATGACTGGTCAAGCAGGATGACGATTGTTGCCGCCGGCCATCAGTTTGAGTTTTATTCTTCAAT
CGTCGATCAATTATACGTGTTGAAAGACGGTTCAGCTATCCACATAGACAATTTTAAAACGAATGGAGCAGAATTGGGCG
ATGTCTATAAAGAATATTTATAA

Upstream 100 bases:

>100_bases
TTCATACAACGCTGCTAAAAGACTATTTAGAAATTAATGGCAGCGTTGTATAATGGAGAATGTTGCAACACCATCCTGAT
GCGAGAAAGGATTTTTCAAA

Downstream 100 bases:

>100_bases
TATTTTCAAGAAAGAGCTTGCATTTCAATCGTATTCTAAATTGCTCATCATTTTATTGCTTCCTCTATTATTCATTTCAT
CCGGATACATATATGTTCAC

Product: hypothetical protein

Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MIKIDDLTKSYGSKSVFNRLNMNIEKNKVTFLMGENGAGKTTLLKCLLKLEPFEGGILYDGEPLEAVRSKVHVIYDDSPF
YDHLSGYQNIKLLINKPAGKEELEQLSQKFLGRELLKKKVKTYSYGQKKKLALMIAALNKPSFLFLDEISNGLDYRSMME
LQELINDWSSRMTIVAAGHQFEFYSSIVDQLYVLKDGSAIHIDNFKTNGAELGDVYKEYL

Sequences:

>Translated_220_residues
MIKIDDLTKSYGSKSVFNRLNMNIEKNKVTFLMGENGAGKTTLLKCLLKLEPFEGGILYDGEPLEAVRSKVHVIYDDSPF
YDHLSGYQNIKLLINKPAGKEELEQLSQKFLGRELLKKKVKTYSYGQKKKLALMIAALNKPSFLFLDEISNGLDYRSMME
LQELINDWSSRMTIVAAGHQFEFYSSIVDQLYVLKDGSAIHIDNFKTNGAELGDVYKEYL
>Mature_220_residues
MIKIDDLTKSYGSKSVFNRLNMNIEKNKVTFLMGENGAGKTTLLKCLLKLEPFEGGILYDGEPLEAVRSKVHVIYDDSPF
YDHLSGYQNIKLLINKPAGKEELEQLSQKFLGRELLKKKVKTYSYGQKKKLALMIAALNKPSFLFLDEISNGLDYRSMME
LQELINDWSSRMTIVAAGHQFEFYSSIVDQLYVLKDGSAIHIDNFKTNGAELGDVYKEYL

Specific function: Implicated in the export process of the lantibiotic SrtA (Potential) [H]

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI45446740, Length=236, Percent_Identity=27.9661016949153, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI47078218, Length=236, Percent_Identity=27.9661016949153, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI31657092, Length=211, Percent_Identity=27.9620853080569, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI27881501, Length=213, Percent_Identity=26.2910798122066, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI30795238, Length=213, Percent_Identity=26.2910798122066, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI116734710, Length=211, Percent_Identity=27.0142180094787, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI105990541, Length=194, Percent_Identity=24.7422680412371, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI21536376, Length=210, Percent_Identity=27.1428571428571, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI46592915, Length=206, Percent_Identity=26.6990291262136, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI46592964, Length=206, Percent_Identity=26.6990291262136, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI148612853, Length=209, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI46592978, Length=206, Percent_Identity=26.6990291262136, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI46592971, Length=206, Percent_Identity=26.6990291262136, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI46592898, Length=209, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI46592956, Length=209, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI1787029, Length=212, Percent_Identity=26.8867924528302, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1786398, Length=227, Percent_Identity=27.3127753303965, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1789672, Length=215, Percent_Identity=25.5813953488372, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1787370, Length=208, Percent_Identity=25, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87081791, Length=213, Percent_Identity=27.2300469483568, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790467, Length=215, Percent_Identity=24.6511627906977, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1790162, Length=227, Percent_Identity=25.9911894273128, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1788761, Length=212, Percent_Identity=26.8867924528302, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1786253, Length=208, Percent_Identity=25.4807692307692, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787164, Length=201, Percent_Identity=25.3731343283582, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1789864, Length=230, Percent_Identity=25.6521739130435, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789751, Length=211, Percent_Identity=26.0663507109005, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87081709, Length=214, Percent_Identity=24.7663551401869, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1789586, Length=222, Percent_Identity=23.4234234234234, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787712, Length=214, Percent_Identity=25.2336448598131, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1788165, Length=236, Percent_Identity=23.3050847457627, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1788225, Length=220, Percent_Identity=22.7272727272727, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1789873, Length=215, Percent_Identity=25.1162790697674, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI87081782, Length=210, Percent_Identity=25.2380952380952, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI48994943, Length=190, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789991, Length=219, Percent_Identity=25.1141552511416, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788540, Length=195, Percent_Identity=28.2051282051282, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786872, Length=216, Percent_Identity=25, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1787041, Length=196, Percent_Identity=27.5510204081633, Blast_Score=62, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=226, Percent_Identity=25.2212389380531, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI115533592, Length=238, Percent_Identity=27.3109243697479, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17565938, Length=235, Percent_Identity=24.6808510638298, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17559834, Length=225, Percent_Identity=28.8888888888889, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71992285, Length=233, Percent_Identity=25.7510729613734, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115535101, Length=183, Percent_Identity=26.775956284153, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=219, Percent_Identity=25.1141552511416, Blast_Score=66, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6324985, Length=227, Percent_Identity=25.1101321585903, Blast_Score=66, Evalue=5e-12,
Organism=Drosophila melanogaster, GI221500365, Length=201, Percent_Identity=28.3582089552239, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI116007184, Length=201, Percent_Identity=28.3582089552239, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24666092, Length=206, Percent_Identity=26.2135922330097, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24643674, Length=205, Percent_Identity=25.8536585365854, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI85726357, Length=204, Percent_Identity=25.9803921568627, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28574150, Length=207, Percent_Identity=25.6038647342995, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI116007328, Length=207, Percent_Identity=25.6038647342995, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI28574533, Length=208, Percent_Identity=29.8076923076923, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI85724864, Length=207, Percent_Identity=25.1207729468599, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24580555, Length=207, Percent_Identity=25.1207729468599, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI85816269, Length=207, Percent_Identity=25.1207729468599, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24580553, Length=207, Percent_Identity=25.1207729468599, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24641342, Length=207, Percent_Identity=29.951690821256, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR022501
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 25070; Mature: 25070

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIDDLTKSYGSKSVFNRLNMNIEKNKVTFLMGENGAGKTTLLKCLLKLEPFEGGILYD
CCEECCHHHHHCCHHHHHHHCCCEECCEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEC
GEPLEAVRSKVHVIYDDSPFYDHLSGYQNIKLLINKPAGKEELEQLSQKFLGRELLKKKV
CCHHHHHHCCEEEEECCCCCHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
KTYSYGQKKKLALMIAALNKPSFLFLDEISNGLDYRSMMELQELINDWSSRMTIVAAGHQ
HHHCCCCCHHHEEEEEECCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEECCC
FEFYSSIVDQLYVLKDGSAIHIDNFKTNGAELGDVYKEYL
HHHHHHHHHHEEEEECCCEEEECCCCCCCCHHHHHHHHHC
>Mature Secondary Structure
MIKIDDLTKSYGSKSVFNRLNMNIEKNKVTFLMGENGAGKTTLLKCLLKLEPFEGGILYD
CCEECCHHHHHCCHHHHHHHCCCEECCEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEC
GEPLEAVRSKVHVIYDDSPFYDHLSGYQNIKLLINKPAGKEELEQLSQKFLGRELLKKKV
CCHHHHHHCCEEEEECCCCCHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
KTYSYGQKKKLALMIAALNKPSFLFLDEISNGLDYRSMMELQELINDWSSRMTIVAAGHQ
HHHCCCCCHHHEEEEEECCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEECCC
FEFYSSIVDQLYVLKDGSAIHIDNFKTNGAELGDVYKEYL
HHHHHHHHHHEEEEECCCEEEECCCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-glutamine [Periplasm]; H2O [C]

Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]