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The map label for this gene is yqkD [H]

Identifier: 52786258

GI number: 52786258

Start: 2442858

End: 2443787

Strand: Direct

Name: yqkD [H]

Synonym: BLi02519

Alternate gene names: 52786258

Gene position: 2442858-2443787 (Clockwise)

Preceding gene: 52786256

Following gene: 52786261

Centisome position: 57.85

GC content: 47.74

Gene sequence:

>930_bases
ATGTTGATTTGGCTGGCTGCTATCGGAGCGGTTTTGCTGTTCATTGCTGCGCTCGGAATCTATTTTACGAATCAAATCAT
GTACATTAAAAAACGGACCGACCAATACATTATTGAGCGGGAAACTGCCGACGGCCATTATGACGAAAAAGCTTTCGCCG
CTCTCCCGAAGGAAGAAATCACCCTCGCTTCTTCTTACGGCTACAATATTAAAGGGTACTACGTGCACCCGCACAAAACG
AAAAACACCGTGATTATCTGCCACGGAGTGACGATGAATCTGCTGAATTCAATCAAATATATGAATCTGTTTCTGGATCT
CGGCTGGAACGCCGTCATATATGACCACAGAAGGCACGGCGCAAGCGGCGGAAAAACGACGAGCTACGGATATTATGAAA
AAAACGATTTGAAAACGGTTGTCAATTGGCTGAGGGAAAAACACGGCGAACAAGCGCTGATCGGGATTCACGGCGAATCG
ATGGGCGCTGTCACAACCCTTCTTTACGCGGGAATGGATGACGCCGAGGCTGATTTTTATGTGGCCGACTGTCCGTTTGC
CACATTTGAGGATCAGCTCATTTACCGGCTGAAAGAAGATTTTCATCTTCCAGGAGCTTTCATTTTGCCGCTCGCCAGCC
TCTTTTTGAGATGGCGGGACGGCTACCGCATCCGTGATGTCTCCCCTTTATCCGTCGTCGGAAAGATCAAAAAACCGGTG
CTGTTCATTCACAGCAAGCACGACGACTATATCCCGGCTGAATCAAGCGAAATGCTTTACGAGAAAAAACCGGGGAAGAA
ACGGCTTTATATTGCTGAAAGAGGAGCGCACGCAATGAGCTACACCCAAAACAGAAACAGCTACAAAAACACGGTGCGGG
ACTTTCTTCAAGAAATCACAAACCGGCACAAAGAAGGCGAACGAGCATAA

Upstream 100 bases:

>100_bases
CAGGCAAGCCGTCACTCTGGGAGCCGCCCCCCTCGGCAAATCTCAATGGTTGTGTGGTATGATAAAGAGAGAAGCATTTA
AGAAAGGAAGAATACAACAA

Downstream 100 bases:

>100_bases
GTCTCGTCCGCCTTCTTTTGGTGCTACAGGATATCTGTAATGTCGCTCATATGATCGCCGATCCAGGAGATGGCCGTCTC
AATTGTATCAAATTCCTTTG

Product: YqkD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MLIWLAAIGAVLLFIAALGIYFTNQIMYIKKRTDQYIIERETADGHYDEKAFAALPKEEITLASSYGYNIKGYYVHPHKT
KNTVIICHGVTMNLLNSIKYMNLFLDLGWNAVIYDHRRHGASGGKTTSYGYYEKNDLKTVVNWLREKHGEQALIGIHGES
MGAVTTLLYAGMDDAEADFYVADCPFATFEDQLIYRLKEDFHLPGAFILPLASLFLRWRDGYRIRDVSPLSVVGKIKKPV
LFIHSKHDDYIPAESSEMLYEKKPGKKRLYIAERGAHAMSYTQNRNSYKNTVRDFLQEITNRHKEGERA

Sequences:

>Translated_309_residues
MLIWLAAIGAVLLFIAALGIYFTNQIMYIKKRTDQYIIERETADGHYDEKAFAALPKEEITLASSYGYNIKGYYVHPHKT
KNTVIICHGVTMNLLNSIKYMNLFLDLGWNAVIYDHRRHGASGGKTTSYGYYEKNDLKTVVNWLREKHGEQALIGIHGES
MGAVTTLLYAGMDDAEADFYVADCPFATFEDQLIYRLKEDFHLPGAFILPLASLFLRWRDGYRIRDVSPLSVVGKIKKPV
LFIHSKHDDYIPAESSEMLYEKKPGKKRLYIAERGAHAMSYTQNRNSYKNTVRDFLQEITNRHKEGERA
>Mature_309_residues
MLIWLAAIGAVLLFIAALGIYFTNQIMYIKKRTDQYIIERETADGHYDEKAFAALPKEEITLASSYGYNIKGYYVHPHKT
KNTVIICHGVTMNLLNSIKYMNLFLDLGWNAVIYDHRRHGASGGKTTSYGYYEKNDLKTVVNWLREKHGEQALIGIHGES
MGAVTTLLYAGMDDAEADFYVADCPFATFEDQLIYRLKEDFHLPGAFILPLASLFLRWRDGYRIRDVSPLSVVGKIKKPV
LFIHSKHDDYIPAESSEMLYEKKPGKKRLYIAERGAHAMSYTQNRNSYKNTVRDFLQEITNRHKEGERA

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 35466; Mature: 35466

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIWLAAIGAVLLFIAALGIYFTNQIMYIKKRTDQYIIERETADGHYDEKAFAALPKEEI
CEEHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEECCCCCCCCCHHHHHCCHHHE
TLASSYGYNIKGYYVHPHKTKNTVIICHGVTMNLLNSIKYMNLFLDLGWNAVIYDHRRHG
EEEECCCCCEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHEECCCCEEEEECCCCC
ASGGKTTSYGYYEKNDLKTVVNWLREKHGEQALIGIHGESMGAVTTLLYAGMDDAEADFY
CCCCCCCCCCCEEHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCEE
VADCPFATFEDQLIYRLKEDFHLPGAFILPLASLFLRWRDGYRIRDVSPLSVVGKIKKPV
EECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCE
LFIHSKHDDYIPAESSEMLYEKKPGKKRLYIAERGAHAMSYTQNRNSYKNTVRDFLQEIT
EEEECCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHH
NRHKEGERA
HHCCCCCCC
>Mature Secondary Structure
MLIWLAAIGAVLLFIAALGIYFTNQIMYIKKRTDQYIIERETADGHYDEKAFAALPKEEI
CEEHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEECCCCCCCCCHHHHHCCHHHE
TLASSYGYNIKGYYVHPHKTKNTVIICHGVTMNLLNSIKYMNLFLDLGWNAVIYDHRRHG
EEEECCCCCEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHEECCCCEEEEECCCCC
ASGGKTTSYGYYEKNDLKTVVNWLREKHGEQALIGIHGESMGAVTTLLYAGMDDAEADFY
CCCCCCCCCCCEEHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCEE
VADCPFATFEDQLIYRLKEDFHLPGAFILPLASLFLRWRDGYRIRDVSPLSVVGKIKKPV
EECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCE
LFIHSKHDDYIPAESSEMLYEKKPGKKRLYIAERGAHAMSYTQNRNSYKNTVRDFLQEIT
EEEECCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHH
NRHKEGERA
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]