Click here to switch to the map view.

The map label for this gene is spoVAB [H]

Identifier: 52786232

GI number: 52786232

Start: 2424542

End: 2424967

Strand: Reverse

Name: spoVAB [H]

Synonym: BLi02493

Alternate gene names: 52786232

Gene position: 2424967-2424542 (Counterclockwise)

Preceding gene: 52786233

Following gene: 52786231

Centisome position: 57.43

GC content: 47.18

Gene sequence:

>426_bases
ATGATCATTAGCGTGATATTTATCATCTTTCTCGGACTCGCAGGAGGGGTTGCTGTTGGATCCGGCTTTGTCGCTTTTCT
TACCGTGCTTGGCATTATCCCGAGGCTGACTCAGCTGACGAAAACAAAAGGATTTATCCAGGCGTATGAATGGGCTGTCA
TTTTAGGCGCGGTTTTCGGAGGATGGGAATCGCTGAACATGTCCCGCTTTTTTTTATCCAAATGGCTGCTTGTTCCGATC
GGCCTTTTTGCGGGCGTTTTCATTGGAATGCTTGCAGCGGCGCTAACAGAAGTCTTGAACGTGCTGCCGATACTGGCGAA
ACGCATCGGGATGGGAGACCGGATTTTGATACTTTTAATGGCCATTGTTTTCGGCAAGATTCTCGGATCGATGTTCCAAT
GGCTCATTTTTGTTCATTTGTCATAA

Upstream 100 bases:

>100_bases
GAGGAGCCCAGCCCCCTGGAGGTCGAGATGTTTAAATATCAGCTTGATTTGGACCATTATGTGGCCATGCACGAAAACAA
AGAAACGACAAAGGATATTC

Downstream 100 bases:

>100_bases
AAGGAGGATTATGATGTCAAGTTTGAAAGATAATTATCAATCGAAAGTTAAAGCGTATCAGCCTTCACCGCCTTATGTCC
TGAACTGTATCAAGGCATTT

Product: SpoVAB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MIISVIFIIFLGLAGGVAVGSGFVAFLTVLGIIPRLTQLTKTKGFIQAYEWAVILGAVFGGWESLNMSRFFLSKWLLVPI
GLFAGVFIGMLAAALTEVLNVLPILAKRIGMGDRILILLMAIVFGKILGSMFQWLIFVHLS

Sequences:

>Translated_141_residues
MIISVIFIIFLGLAGGVAVGSGFVAFLTVLGIIPRLTQLTKTKGFIQAYEWAVILGAVFGGWESLNMSRFFLSKWLLVPI
GLFAGVFIGMLAAALTEVLNVLPILAKRIGMGDRILILLMAIVFGKILGSMFQWLIFVHLS
>Mature_141_residues
MIISVIFIIFLGLAGGVAVGSGFVAFLTVLGIIPRLTQLTKTKGFIQAYEWAVILGAVFGGWESLNMSRFFLSKWLLVPI
GLFAGVFIGMLAAALTEVLNVLPILAKRIGMGDRILILLMAIVFGKILGSMFQWLIFVHLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020144
- ProDom:   PD086170 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15302; Mature: 15302

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISVIFIIFLGLAGGVAVGSGFVAFLTVLGIIPRLTQLTKTKGFIQAYEWAVILGAVFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWESLNMSRFFLSKWLLVPIGLFAGVFIGMLAAALTEVLNVLPILAKRIGMGDRILILLM
CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AIVFGKILGSMFQWLIFVHLS
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIISVIFIIFLGLAGGVAVGSGFVAFLTVLGIIPRLTQLTKTKGFIQAYEWAVILGAVFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWESLNMSRFFLSKWLLVPIGLFAGVFIGMLAAALTEVLNVLPILAKRIGMGDRILILLM
CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AIVFGKILGSMFQWLIFVHLS
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3926949; 8969508; 9384377 [H]