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The map label for this gene is nlpD [C]

Identifier: 52786188

GI number: 52786188

Start: 2384083

End: 2384907

Strand: Reverse

Name: nlpD [C]

Synonym: BLi02447

Alternate gene names: 52786188

Gene position: 2384907-2384083 (Counterclockwise)

Preceding gene: 52786189

Following gene: 52786186

Centisome position: 56.48

GC content: 48.73

Gene sequence:

>825_bases
TTGAAGAAACTCAGACATCAAAACTTCCTGTTCGCGATCGCATGGCTTTCGGGATTGGCGCTTTTCGTCAATGCCCCGGG
GTCGGAAGCCTCAGAGTGGATTGAACCGATTAAAGGAGAGATCACAGATCAATTCGGTACGAGAGGCGGAAAGCATAAGG
GGCTTGACATCGCTGCTCCCGAAGGGGAAGCAGTAGCGGCAGCCGCAGACGGAACGATAAGCAAATCGTATCAATCCGAC
TCCTACGGCCAAGTGATATTTATTAAACATGACAACGGATATGAAACCGTTTATGCCCACTTAAGCAAACGCCTGAAAAA
GGAAAAGGAGCGGGTGAAAAAAGGCGAGCAAATCGGAATCATCGGCATTACGGGAATATCGACCGGAACCCACCTGCATT
TTGAAATGCATCACGGTTCATGGACTGAAGATAAAAGATATGCAATCAATCCGCTGACGGTGCTTCGTGAGGAGGCGTTC
CGGCAAAATTCTATCCACGTTCATCAAAACGCCGGGACAATGAGCGGTGCGGTGACCGTTCAAAAAGGGGACACGCTCTG
GAGAATCAGCAAGGATAGCGGTATATCCATCGAGGAGATCATGAGAATAAACGGGTTGAAACATTCAAATCTCAAGGCCG
GCCAAACACTCCGCCTTCATGACGATGAATCGAAGACCGGTACATATGTAGTGCGGAAAGGGGATACGCTTCATCATATC
GCCGAAAAAATGGGCGTAACTGTACAGCGCCTCAAAGAATGGAACGATTTGAAAGGAGAGCGGATTTATCCCCGCCAGAT
GCTTGAGATCAGGGAGAATTCCTAA

Upstream 100 bases:

>100_bases
TTTAATGTATAAATTGTATTGATTTGGAAGTATACTAAGCTGTCTCCGAATAGGGGGCAATTTTACCGAAGATGCATGTA
ATAGGAGGATATGGAAAACC

Downstream 100 bases:

>100_bases
AAAAAAACGGAACCTGAAAGGAATTCTTTTCAGGTTCCGCAGCTTCTGTTTAAGGAAGGTCGATGGCTTTAACAGACACG
ATATCCGGGATGTTTTTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MKKLRHQNFLFAIAWLSGLALFVNAPGSEASEWIEPIKGEITDQFGTRGGKHKGLDIAAPEGEAVAAAADGTISKSYQSD
SYGQVIFIKHDNGYETVYAHLSKRLKKEKERVKKGEQIGIIGITGISTGTHLHFEMHHGSWTEDKRYAINPLTVLREEAF
RQNSIHVHQNAGTMSGAVTVQKGDTLWRISKDSGISIEEIMRINGLKHSNLKAGQTLRLHDDESKTGTYVVRKGDTLHHI
AEKMGVTVQRLKEWNDLKGERIYPRQMLEIRENS

Sequences:

>Translated_274_residues
MKKLRHQNFLFAIAWLSGLALFVNAPGSEASEWIEPIKGEITDQFGTRGGKHKGLDIAAPEGEAVAAAADGTISKSYQSD
SYGQVIFIKHDNGYETVYAHLSKRLKKEKERVKKGEQIGIIGITGISTGTHLHFEMHHGSWTEDKRYAINPLTVLREEAF
RQNSIHVHQNAGTMSGAVTVQKGDTLWRISKDSGISIEEIMRINGLKHSNLKAGQTLRLHDDESKTGTYVVRKGDTLHHI
AEKMGVTVQRLKEWNDLKGERIYPRQMLEIRENS
>Mature_274_residues
MKKLRHQNFLFAIAWLSGLALFVNAPGSEASEWIEPIKGEITDQFGTRGGKHKGLDIAAPEGEAVAAAADGTISKSYQSD
SYGQVIFIKHDNGYETVYAHLSKRLKKEKERVKKGEQIGIIGITGISTGTHLHFEMHHGSWTEDKRYAINPLTVLREEAF
RQNSIHVHQNAGTMSGAVTVQKGDTLWRISKDSGISIEEIMRINGLKHSNLKAGQTLRLHDDESKTGTYVVRKGDTLHHI
AEKMGVTVQRLKEWNDLKGERIYPRQMLEIRENS

Specific function: May Be Involved In Stationary-Phase Survival. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI1789099, Length=126, Percent_Identity=37.3015873015873, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI87081989, Length=112, Percent_Identity=38.3928571428571, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI87082174, Length=127, Percent_Identity=33.0708661417323, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 30709; Mature: 30709

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLRHQNFLFAIAWLSGLALFVNAPGSEASEWIEPIKGEITDQFGTRGGKHKGLDIAAP
CCCCHHCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCEEECC
EGEAVAAAADGTISKSYQSDSYGQVIFIKHDNGYETVYAHLSKRLKKEKERVKKGEQIGI
CCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
IGITGISTGTHLHFEMHHGSWTEDKRYAINPLTVLREEAFRQNSIHVHQNAGTMSGAVTV
EEEECCCCCEEEEEEECCCCCCCCCCEEECHHHHHHHHHHCCCCEEEEECCCCCCCEEEE
QKGDTLWRISKDSGISIEEIMRINGLKHSNLKAGQTLRLHDDESKTGTYVVRKGDTLHHI
ECCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCHHHHH
AEKMGVTVQRLKEWNDLKGERIYPRQMLEIRENS
HHHHCHHHHHHHHHHCCCCCEECHHHHHHHCCCC
>Mature Secondary Structure
MKKLRHQNFLFAIAWLSGLALFVNAPGSEASEWIEPIKGEITDQFGTRGGKHKGLDIAAP
CCCCHHCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCEEECC
EGEAVAAAADGTISKSYQSDSYGQVIFIKHDNGYETVYAHLSKRLKKEKERVKKGEQIGI
CCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
IGITGISTGTHLHFEMHHGSWTEDKRYAINPLTVLREEAFRQNSIHVHQNAGTMSGAVTV
EEEECCCCCEEEEEEECCCCCCCCCCEEECHHHHHHHHHHCCCCEEEEECCCCCCCEEEE
QKGDTLWRISKDSGISIEEIMRINGLKHSNLKAGQTLRLHDDESKTGTYVVRKGDTLHHI
ECCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCHHHHH
AEKMGVTVQRLKEWNDLKGERIYPRQMLEIRENS
HHHHCHHHHHHHHHHCCCCCEECHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]