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The map label for this gene is qcrC [H]

Identifier: 52786133

GI number: 52786133

Start: 2333861

End: 2334628

Strand: Reverse

Name: qcrC [H]

Synonym: BLi02389

Alternate gene names: 52786133

Gene position: 2334628-2333861 (Counterclockwise)

Preceding gene: 52786134

Following gene: 52786132

Centisome position: 55.29

GC content: 49.74

Gene sequence:

>768_bases
ATGAAAAGGGGAAAAGGGATGAAGTTTGTCGGTGATTCACGGATCCCGGCGGAAAGAAAACCGAATATTCCAAAAGATTA
TTCCGAATTTCCAGGGAAAACGGAAGCGTTCTGGCCGAATTTCCTGCTGAAAGAATGGATGGTCGGAGCGGTTTTCCTTG
TCGGTTTTCTCGTGCTGACCATCGTGCATGAGCCTCCGCTCGAGCGGATGGCAGATCCGACCGATACCGGCTACATACCT
TTGCCAGACTGGTATTTTCTATTTCTTTACCAATTGCTGAAATACGAATATGCTGCCGGACCGTATACGGTTGTCGGCGC
GATTATTATCCCGACAATTGCGTTCGGAGCGCTTTTATTGGCGCCGTTTCTTGACAGAGGCCCTGAAAGAAGGCCGTTTA
AACGCCCGGTTGCCGTAGGGTTGATGCTTTTGGCGATTTCAGCGACGGTTTTCTTAACGTGGCAGTCCGTTGTCACTCAC
GACTGGGCCGCTGCTGAAGAGCAGGGTAAAATCAAGGAAGAGGCCGATATTGATACGAGTGCGGAAGGCTATAAGATTTA
TCAGGAGCAGGGCTGTATCTCGTGCCACGGAGACAACATGCAAGGAGGAGCGGCAGGCCCGTCTCTCGTTGACAACGGCT
TGTCTCCTGAAGAGATTGCGAAAATCGCCAAGGAAGGAAAAGGCGAAATGCCTGCCGGCGTTTTTAAAGGATCTGACAAA
GAGCTTAAAGAACTGTCTAAATTCATCTCCGAAACAACGGCGAAATAA

Upstream 100 bases:

>100_bases
CTCTGTTCGGACTGATGGCTGCACACTTTATCATGATTCGCAAACAAGGAATTTCTGGGCCGCTGTAAACGAGCGACTCA
ATTGAGAAGGAGGGGATGGC

Downstream 100 bases:

>100_bases
AACGGTTGTCAAGTTGATGAAGGCAGGCTATACTCTTGATAGAGCTGAAGCTGACGGCAAGTCAGCCTCTCGGGCTGTCG
ACAATGTCGATGGCCTTTTC

Product: QcrC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKRGKGMKFVGDSRIPAERKPNIPKDYSEFPGKTEAFWPNFLLKEWMVGAVFLVGFLVLTIVHEPPLERMADPTDTGYIP
LPDWYFLFLYQLLKYEYAAGPYTVVGAIIIPTIAFGALLLAPFLDRGPERRPFKRPVAVGLMLLAISATVFLTWQSVVTH
DWAAAEEQGKIKEEADIDTSAEGYKIYQEQGCISCHGDNMQGGAAGPSLVDNGLSPEEIAKIAKEGKGEMPAGVFKGSDK
ELKELSKFISETTAK

Sequences:

>Translated_255_residues
MKRGKGMKFVGDSRIPAERKPNIPKDYSEFPGKTEAFWPNFLLKEWMVGAVFLVGFLVLTIVHEPPLERMADPTDTGYIP
LPDWYFLFLYQLLKYEYAAGPYTVVGAIIIPTIAFGALLLAPFLDRGPERRPFKRPVAVGLMLLAISATVFLTWQSVVTH
DWAAAEEQGKIKEEADIDTSAEGYKIYQEQGCISCHGDNMQGGAAGPSLVDNGLSPEEIAKIAKEGKGEMPAGVFKGSDK
ELKELSKFISETTAK
>Mature_255_residues
MKRGKGMKFVGDSRIPAERKPNIPKDYSEFPGKTEAFWPNFLLKEWMVGAVFLVGFLVLTIVHEPPLERMADPTDTGYIP
LPDWYFLFLYQLLKYEYAAGPYTVVGAIIIPTIAFGALLLAPFLDRGPERRPFKRPVAVGLMLLAISATVFLTWQSVVTH
DWAAAEEQGKIKEEADIDTSAEGYKIYQEQGCISCHGDNMQGGAAGPSLVDNGLSPEEIAKIAKEGKGEMPAGVFKGSDK
ELKELSKFISETTAK

Specific function: Component of the menaquinol-cytochrome c reductase complex [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR012049 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00034 Cytochrom_C [H]

EC number: 1.10.2.-

Molecular weight: Translated: 28137; Mature: 28137

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS51007 CYTC ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGKGMKFVGDSRIPAERKPNIPKDYSEFPGKTEAFWPNFLLKEWMVGAVFLVGFLVLT
CCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHH
IVHEPPLERMADPTDTGYIPLPDWYFLFLYQLLKYEYAAGPYTVVGAIIIPTIAFGALLL
HHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
APFLDRGPERRPFKRPVAVGLMLLAISATVFLTWQSVVTHDWAAAEEQGKIKEEADIDTS
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC
AEGYKIYQEQGCISCHGDNMQGGAAGPSLVDNGLSPEEIAKIAKEGKGEMPAGVFKGSDK
CCCHHHHHHCCCEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCHHHCCCHH
ELKELSKFISETTAK
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRGKGMKFVGDSRIPAERKPNIPKDYSEFPGKTEAFWPNFLLKEWMVGAVFLVGFLVLT
CCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHH
IVHEPPLERMADPTDTGYIPLPDWYFLFLYQLLKYEYAAGPYTVVGAIIIPTIAFGALLL
HHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
APFLDRGPERRPFKRPVAVGLMLLAISATVFLTWQSVVTHDWAAAEEQGKIKEEADIDTS
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC
AEGYKIYQEQGCISCHGDNMQGGAAGPSLVDNGLSPEEIAKIAKEGKGEMPAGVFKGSDK
CCCHHHHHHCCCEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCHHHCCCHH
ELKELSKFISETTAK
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7592464; 8760912; 9384377 [H]