Click here to switch to the map view.

The map label for this gene is ypdP [H]

Identifier: 52786081

GI number: 52786081

Start: 2284687

End: 2285388

Strand: Direct

Name: ypdP [H]

Synonym: BLi02337

Alternate gene names: 52786081

Gene position: 2284687-2285388 (Clockwise)

Preceding gene: 52786078

Following gene: 52786082

Centisome position: 54.11

GC content: 47.86

Gene sequence:

>702_bases
TTGTTTAACGAAATATTATGGATTAGTTTTGCGATCATTAATTTTATCATTGTTCTCTTCTTTTTTAAACGATTTGGCAA
GACCGGTTTATTTGTCTGGATCGGTTTTGCGACAGCCGCCGCCAATATCGAGGTAGTCAAAACGGTCGAGCTGTTCGGTT
TGACTGCGACGCTCGGCAACATCCTGTACGGAAGCGTGTTTTTTGCGACCGACGTCATCAATGAAAGATACGGAAAGGAA
GAAGCGAAAAAAGCCGTTTCAATCGGTTTTTTCATTCTGATTACCTTGACGCTCGTCATGCAGGGAGCGCTCCTATTCAA
GCCGCATCCCGAAGACATCGCACAGCCTGCGCTGGAGACGATATTCGGCTTCTTGCCCCGCGTGGCCCTCGGCAGCCTGC
TCGCCTATATCATCAGCCAAACGCTTGATGTTTATGTATATTCGGGAATCAGAAGGTTATTTCCTTCCGACCGGGCACTG
TGGCTTCGCAACAGCGGCAGTACAGCCTTAAGCCAGCTGCTTGATACGTTGATTTTTACGAGCGTCGCGTTTATGGGCGC
TTATCCGCTGGATGTATGGATTCAGATTTTTATCACGACATACGTCTTGAAATTCGTTGTAGCCGTATTCGCAGCGCCGT
ACGCTTATGCCGCTAAAAGGATCACCCCTTTGGATGAAAGGAGCGAAAACAATGCCGGTTGA

Upstream 100 bases:

>100_bases
TTTTCATTCCTGCTCTCAGTTTCACAAAATCACCTTTATTCAAATTATGGCTTGTTATGCTATAATCAAAACAGTTTATT
CAGAAAGGAAGTACCCGTTC

Downstream 100 bases:

>100_bases
GGTGTATATTGACGGAGCAAGCGCCGGGGATCCCGGACCGTCCGGACTTGGCATTTTTATCAAAGACGGCCAGAAGACCG
AGTCCTTCTCCCTTCCCGCC

Product: YpdP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MFNEILWISFAIINFIIVLFFFKRFGKTGLFVWIGFATAAANIEVVKTVELFGLTATLGNILYGSVFFATDVINERYGKE
EAKKAVSIGFFILITLTLVMQGALLFKPHPEDIAQPALETIFGFLPRVALGSLLAYIISQTLDVYVYSGIRRLFPSDRAL
WLRNSGSTALSQLLDTLIFTSVAFMGAYPLDVWIQIFITTYVLKFVVAVFAAPYAYAAKRITPLDERSENNAG

Sequences:

>Translated_233_residues
MFNEILWISFAIINFIIVLFFFKRFGKTGLFVWIGFATAAANIEVVKTVELFGLTATLGNILYGSVFFATDVINERYGKE
EAKKAVSIGFFILITLTLVMQGALLFKPHPEDIAQPALETIFGFLPRVALGSLLAYIISQTLDVYVYSGIRRLFPSDRAL
WLRNSGSTALSQLLDTLIFTSVAFMGAYPLDVWIQIFITTYVLKFVVAVFAAPYAYAAKRITPLDERSENNAG
>Mature_233_residues
MFNEILWISFAIINFIIVLFFFKRFGKTGLFVWIGFATAAANIEVVKTVELFGLTATLGNILYGSVFFATDVINERYGKE
EAKKAVSIGFFILITLTLVMQGALLFKPHPEDIAQPALETIFGFLPRVALGSLLAYIISQTLDVYVYSGIRRLFPSDRAL
WLRNSGSTALSQLLDTLIFTSVAFMGAYPLDVWIQIFITTYVLKFVVAVFAAPYAYAAKRITPLDERSENNAG

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 25985; Mature: 25985

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNEILWISFAIINFIIVLFFFKRFGKTGLFVWIGFATAAANIEVVKTVELFGLTATLGN
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHH
ILYGSVFFATDVINERYGKEEAKKAVSIGFFILITLTLVMQGALLFKPHPEDIAQPALET
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHH
IFGFLPRVALGSLLAYIISQTLDVYVYSGIRRLFPSDRALWLRNSGSTALSQLLDTLIFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH
SVAFMGAYPLDVWIQIFITTYVLKFVVAVFAAPYAYAAKRITPLDERSENNAG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MFNEILWISFAIINFIIVLFFFKRFGKTGLFVWIGFATAAANIEVVKTVELFGLTATLGN
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHH
ILYGSVFFATDVINERYGKEEAKKAVSIGFFILITLTLVMQGALLFKPHPEDIAQPALET
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHH
IFGFLPRVALGSLLAYIISQTLDVYVYSGIRRLFPSDRALWLRNSGSTALSQLLDTLIFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH
SVAFMGAYPLDVWIQIFITTYVLKFVVAVFAAPYAYAAKRITPLDERSENNAG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]