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The map label for this gene is yodH [H]

Identifier: 52786026

GI number: 52786026

Start: 2239668

End: 2240378

Strand: Direct

Name: yodH [H]

Synonym: BLi02282

Alternate gene names: 52786026

Gene position: 2239668-2240378 (Clockwise)

Preceding gene: 52786024

Following gene: 52786027

Centisome position: 53.04

GC content: 48.52

Gene sequence:

>711_bases
TTGAGCGATTATTTAGACATGCTCGCCAGCTTCGGCGTCTCATCCGCTCATCCCGGCGGGATGTCCCTGTCAAAGGCAGT
GCTCGCCAAAGCCGGCATCGACCCTGAGCAGCCGATTCTTGATGCAGGCTGCGGAACCGGCCAGACCGCCGCTTATTTGG
GTCAGCTTCTGTTTCCTGTCACTGCCCTTGATGCCGACCCGGTCATGATCGATAAAGCCCGACAGCGTTTTAAAAAAGAA
CAGCTTTCCATTCCGGCTGTCCGCTCTCCACTTGAGGAAATGCCGTTTCAGTCTGAAAGCTTTGCCTGTGTATTAACTGA
ATCTGTGCTGAGCTTCACAAATATCCGGTCTGCTTTACAGGAAATCCGGCGGATTTTAAAACCCGGAGGGATGCTGGTCG
CGATCGAAGTCTGCCTTAAGGAAGGAAACGCACTGACAGACGAAGCAAAAAAAGAAATCACGGAATTTTACGGATTCACC
GCATTATATGACGAGGATGAGTGGGTCAATGTCCTTCGAGAAGAAGGATTTTCAAAGATTGACATCATTCCTGTCGTATT
GGAAGATGCAGGAGACCCGGATGACGCCGTTGAAATGGATCTGTCGCCTGCAATTTCCGACAAAGACTATGAAACGATGG
AAAAACACCTGCATTACCTGGAAAAATACCGGGACTCTCTCGATCATATTATTTTTATATCACATCTATAA

Upstream 100 bases:

>100_bases
GAATCACTTAAATACCGATTTTTCCGGGATGCTGGCATTCGATCGTTTTCAACCATTATTCCGCTTTTGCATATGCATAC
AAAAAAGGAGGGATCTCAAT

Downstream 100 bases:

>100_bases
ATCATCATTTGTCCTCCTTCTTTCGTCCAACCTTTTCTATTAAATCCGTCATAAGCTGACTAGGAATAGATTAGATGATG
GAAGGAGCATTCAAGTGGAC

Product: YodH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSDYLDMLASFGVSSAHPGGMSLSKAVLAKAGIDPEQPILDAGCGTGQTAAYLGQLLFPVTALDADPVMIDKARQRFKKE
QLSIPAVRSPLEEMPFQSESFACVLTESVLSFTNIRSALQEIRRILKPGGMLVAIEVCLKEGNALTDEAKKEITEFYGFT
ALYDEDEWVNVLREEGFSKIDIIPVVLEDAGDPDDAVEMDLSPAISDKDYETMEKHLHYLEKYRDSLDHIIFISHL

Sequences:

>Translated_236_residues
MSDYLDMLASFGVSSAHPGGMSLSKAVLAKAGIDPEQPILDAGCGTGQTAAYLGQLLFPVTALDADPVMIDKARQRFKKE
QLSIPAVRSPLEEMPFQSESFACVLTESVLSFTNIRSALQEIRRILKPGGMLVAIEVCLKEGNALTDEAKKEITEFYGFT
ALYDEDEWVNVLREEGFSKIDIIPVVLEDAGDPDDAVEMDLSPAISDKDYETMEKHLHYLEKYRDSLDHIIFISHL
>Mature_235_residues
SDYLDMLASFGVSSAHPGGMSLSKAVLAKAGIDPEQPILDAGCGTGQTAAYLGQLLFPVTALDADPVMIDKARQRFKKEQ
LSIPAVRSPLEEMPFQSESFACVLTESVLSFTNIRSALQEIRRILKPGGMLVAIEVCLKEGNALTDEAKKEITEFYGFTA
LYDEDEWVNVLREEGFSKIDIIPVVLEDAGDPDDAVEMDLSPAISDKDYETMEKHLHYLEKYRDSLDHIIFISHL

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 26106; Mature: 25975

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDYLDMLASFGVSSAHPGGMSLSKAVLAKAGIDPEQPILDAGCGTGQTAAYLGQLLFPV
CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHHHH
TALDADPVMIDKARQRFKKEQLSIPAVRSPLEEMPFQSESFACVLTESVLSFTNIRSALQ
HHCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
EIRRILKPGGMLVAIEVCLKEGNALTDEAKKEITEFYGFTALYDEDEWVNVLREEGFSKI
HHHHHHCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHCCHHEECCHHHHHHHHHCCCCEE
DIIPVVLEDAGDPDDAVEMDLSPAISDKDYETMEKHLHYLEKYRDSLDHIIFISHL
EEEEEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECC
>Mature Secondary Structure 
SDYLDMLASFGVSSAHPGGMSLSKAVLAKAGIDPEQPILDAGCGTGQTAAYLGQLLFPV
CHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHHHH
TALDADPVMIDKARQRFKKEQLSIPAVRSPLEEMPFQSESFACVLTESVLSFTNIRSALQ
HHCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
EIRRILKPGGMLVAIEVCLKEGNALTDEAKKEITEFYGFTALYDEDEWVNVLREEGFSKI
HHHHHHCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHCCHHEECCHHHHHHHHHCCCCEE
DIIPVVLEDAGDPDDAVEMDLSPAISDKDYETMEKHLHYLEKYRDSLDHIIFISHL
EEEEEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]