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The map label for this gene is yndE [H]

Identifier: 52785928

GI number: 52785928

Start: 2140107

End: 2141207

Strand: Reverse

Name: yndE [H]

Synonym: BLi02179

Alternate gene names: 52785928

Gene position: 2141207-2140107 (Counterclockwise)

Preceding gene: 52785929

Following gene: 52785927

Centisome position: 50.71

GC content: 44.5

Gene sequence:

>1101_bases
ATGATGGTAGGTCAGCAGGACAAAATTACCGTTTCACAAACGAGCATCGTCATCACGAATTTTCTGCTGGGAACCGGCAT
CTTGACGCTGCCGCGGACATCTGGGGAAGCGGTTAAAGCGCCGGATGTCTGGCTTTCTGTTGCATTCGGAGGGCTGGTTG
CCATATTAGCCGGTTTCATCATGGTGAAATTAAGCATGGAGTACCCCGACAAAACGCTATATCAATATAGCCGGGATCTC
ATTGGCAAGTGGCCGGGAGGACTTTTCACCCTGCTTTTGATTTGTTATTTTCTCGCAACATCAGGTTTCCAAGTCCGATC
TGTCACAGAGGTTATGGGATTTTACTTACTGGAAGAAACGCCGATTTGGGCGACAGCGATGGTTTTTTTATGGAGCGGAA
TCTATTTATTAACCGGCGGTATTAACCCGCTCGCCCGACTTTATGAAATCATCTTTCCAATTACTGTTCTCATTTTTCTG
ATCGTCATTTTTATGAGCGCAAGCATATTCGACATCGACAATTTGCGCCCGGTTCTCGGGAAAGGGATCAAGCCGGTGCT
GGAAGGAGTCAAAACAACGTCTTTTGCTTATACAGGCATAGAAATCATACTGATCATCGTTCCTTTTATGAGAAAGCCCG
AGCAAGCCTTAAAAGCTACTTTGATGGGGATTTCTTTCCCGATTGTCTTTTATATGATCACCGTCATTATGGTCATCGGT
GCATTGGCAATCGAGGGAGTGACATCACGGACATGGCCGACGATTGATTTGATGCGAAGTTTTGAAATACCTGGGCTGAT
TTTTGAACGTTTTGAGTCCTTGCTGCTAGTCATCTGGATCATGCAAATGTTCTCCAGTTTTACGATCAGCTATTTTGCTG
CTGCTTTAGGTTTGTCGCAACTCTTGAAGAAAAGGATGGAACCGATATTATTCAGCTTGCTTCCGGTCATTTATCTCATT
GCGATGGCGCCTAAAAATATCAATCAGCTTTTTCAAATGGGAGATCTAATCGGCAACAGCGCCATCTATTTGGTCGGTCT
CATCCCGCTAATGCTTCTGGTCATATCGAAAGTGAGGAGGAAAAAGTTTGAAAAAAACTAA

Upstream 100 bases:

>100_bases
TAGGCGGTTTGACCCCGCTCGTGCTGCTGGTGATTTCAAAAATAAGAAGGAGAAAACAGGGAATCAGCTGACGCTTGAAA
AAGAAAGGGGTGATTTCTCC

Downstream 100 bases:

>100_bases
CACCATCCGTTATTTAACGAGTGTTTTACTATTGTTTCTATTAACCGGATGCTGGAGCAGCCACGAAATTGAAGAGCTCG
GCTTAACATTTGCAATGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MMVGQQDKITVSQTSIVITNFLLGTGILTLPRTSGEAVKAPDVWLSVAFGGLVAILAGFIMVKLSMEYPDKTLYQYSRDL
IGKWPGGLFTLLLICYFLATSGFQVRSVTEVMGFYLLEETPIWATAMVFLWSGIYLLTGGINPLARLYEIIFPITVLIFL
IVIFMSASIFDIDNLRPVLGKGIKPVLEGVKTTSFAYTGIEIILIIVPFMRKPEQALKATLMGISFPIVFYMITVIMVIG
ALAIEGVTSRTWPTIDLMRSFEIPGLIFERFESLLLVIWIMQMFSSFTISYFAAALGLSQLLKKRMEPILFSLLPVIYLI
AMAPKNINQLFQMGDLIGNSAIYLVGLIPLMLLVISKVRRKKFEKN

Sequences:

>Translated_366_residues
MMVGQQDKITVSQTSIVITNFLLGTGILTLPRTSGEAVKAPDVWLSVAFGGLVAILAGFIMVKLSMEYPDKTLYQYSRDL
IGKWPGGLFTLLLICYFLATSGFQVRSVTEVMGFYLLEETPIWATAMVFLWSGIYLLTGGINPLARLYEIIFPITVLIFL
IVIFMSASIFDIDNLRPVLGKGIKPVLEGVKTTSFAYTGIEIILIIVPFMRKPEQALKATLMGISFPIVFYMITVIMVIG
ALAIEGVTSRTWPTIDLMRSFEIPGLIFERFESLLLVIWIMQMFSSFTISYFAAALGLSQLLKKRMEPILFSLLPVIYLI
AMAPKNINQLFQMGDLIGNSAIYLVGLIPLMLLVISKVRRKKFEKN
>Mature_366_residues
MMVGQQDKITVSQTSIVITNFLLGTGILTLPRTSGEAVKAPDVWLSVAFGGLVAILAGFIMVKLSMEYPDKTLYQYSRDL
IGKWPGGLFTLLLICYFLATSGFQVRSVTEVMGFYLLEETPIWATAMVFLWSGIYLLTGGINPLARLYEIIFPITVLIFL
IVIFMSASIFDIDNLRPVLGKGIKPVLEGVKTTSFAYTGIEIILIIVPFMRKPEQALKATLMGISFPIVFYMITVIMVIG
ALAIEGVTSRTWPTIDLMRSFEIPGLIFERFESLLLVIWIMQMFSSFTISYFAAALGLSQLLKKRMEPILFSLLPVIYLI
AMAPKNINQLFQMGDLIGNSAIYLVGLIPLMLLVISKVRRKKFEKN

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 40878; Mature: 40878

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVGQQDKITVSQTSIVITNFLLGTGILTLPRTSGEAVKAPDVWLSVAFGGLVAILAGFI
CCCCCCCCEEEHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MVKLSMEYPDKTLYQYSRDLIGKWPGGLFTLLLICYFLATSGFQVRSVTEVMGFYLLEET
HHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PIWATAMVFLWSGIYLLTGGINPLARLYEIIFPITVLIFLIVIFMSASIFDIDNLRPVLG
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHC
KGIKPVLEGVKTTSFAYTGIEIILIIVPFMRKPEQALKATLMGISFPIVFYMITVIMVIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAIEGVTSRTWPTIDLMRSFEIPGLIFERFESLLLVIWIMQMFSSFTISYFAAALGLSQ
HHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKKRMEPILFSLLPVIYLIAMAPKNINQLFQMGDLIGNSAIYLVGLIPLMLLVISKVRR
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KKFEKN
HHCCCC
>Mature Secondary Structure
MMVGQQDKITVSQTSIVITNFLLGTGILTLPRTSGEAVKAPDVWLSVAFGGLVAILAGFI
CCCCCCCCEEEHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MVKLSMEYPDKTLYQYSRDLIGKWPGGLFTLLLICYFLATSGFQVRSVTEVMGFYLLEET
HHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PIWATAMVFLWSGIYLLTGGINPLARLYEIIFPITVLIFLIVIFMSASIFDIDNLRPVLG
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHC
KGIKPVLEGVKTTSFAYTGIEIILIIVPFMRKPEQALKATLMGISFPIVFYMITVIMVIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAIEGVTSRTWPTIDLMRSFEIPGLIFERFESLLLVIWIMQMFSSFTISYFAAALGLSQ
HHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKKRMEPILFSLLPVIYLIAMAPKNINQLFQMGDLIGNSAIYLVGLIPLMLLVISKVRR
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KKFEKN
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]