| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is dacC [H]
Identifier: 52785884
GI number: 52785884
Start: 2080587
End: 2082815
Strand: Reverse
Name: dacC [H]
Synonym: BLi02133
Alternate gene names: 52785884
Gene position: 2082815-2080587 (Counterclockwise)
Preceding gene: 52785885
Following gene: 52785883
Centisome position: 49.32
GC content: 48.32
Gene sequence:
>2229_bases GTGGTAAATTTGAACCAAAATATACTGACAAGAACGGAATCGCAGCTCGCTTTTTACGGACTGGCGCCTTTTCTGCTCAT CATCGTGACTGCAGCAGGCGTTCCTTTGTCAGCGGAATTGACGGAATTCAATATCACCCCATACCGTCATTTGATCATGA GCCTTGCCATGCTTTTCATCCCCCTGATTCTCGGTGTCATGTCGGGGTTTATCCTGCTTGATGAGCGCGACGAAAATATG ATTCAGTATTTTGCCGTGACGCCCTTGTCGAAGCGCGGATATGTCATGATCCGGCTCATCCTGCCGATGGCGATGACATT ATGCTACAGCATTTTGCTGTTTGCCTCCGGCGGTCTAATGGCGCCTGGCGCTGTGAACCTATTGTTCGTCCTGATCATGG TCACGCTTGAAGCCCCGATTTACACGCTGCTTTTAGCCGCCTATGTCGCAAACAAAGTGGAAGGACTCGCTTTAATGAAA GGATTCAGCCTGCTCACTCTCATGCCGGCCGCGGTTTATTTTATTCCTGTGCCGTGGCAGCTTTTCGGTGTTTTCACCTT ATTGGACAGCGAAAACGTACTTGGCGGGAATATCCCACGAAGGGCTTTTTCTCGTTTTCGGGATCACCGGAATTGCGCTG CACATTATGATACTGCTGTTTTTATACCGGAGGTTTTTGGTGAAAACCGACCAATAGGAGTATATCCCGCCCCGTTTTGC AATAAAGTATTAAAACATAAGCGGGAGGCGGGATATCCGATGAAGAAACATATGAAGCTTTGTCTGTGTATGATGATGAT CTTTGTATTGACTTTGGCCGGCAGCATGGACGGCTTGGGCGCTGAGGAAAAAGGCGGGCTCAAAGAGCAAATCGATCAGC TGTTAAAGACCGAACCTGATTTAAAAGGAGCGCTCGCAGGCATCAGCGTCAGGTCTGCGGAAAGCGGGAAAATGATATAC GGACATATGGGCGATACACGGATGAGACCTGCGTCCAATCTGAAGCTTTTAACGGCAGCAGCTGCCTATTCCGTCCTGGG CGAGGACTATACCTTTCCCACAGAGGTAATGGCTGATGGGGCGCGAGCCGCGGGCACACTCAAAGGCAGCCTTTATATAA AAGGAAAAGGCGATCCGACGCTTTTGACAGCGGACTTTCAGCAAATGGCCAAAGCACTCCGAAAACAAGGGATCACAGTT ATCCGGGGAGACTTGGTCGGCGATGATTCCTGGTACGATGAAATCCGCTATTCTCAAGACCTTTCCTGGACCGATGAAGA CGCATACTATGGAGCGCAGATTTCAGCTTTAACTGTTTCGCCAAATGAAGACTATGATGCCGGAACGGTCATAATCGACG TGAACCCTGCCGGAAAAACCGGAAAAAAACCTGCTGTATTGCTCACCCCGCAAACAAACCATGTCAAAATCAAAAACGAT GCCAAGACTGTTGCTGCCGACGGAAAAAAAGATATCACGATTAAAAGGAAACACGGAGGAAATACCATCCAAATCAAAGG GACGATTCCACAAGGCGCTTCAAGGGTCAGACAATGGGTTGCGGTTTGGGAGCCGTCAGAATATGCACTCGATTTATTTA AACAGGCTTTACATCAACAAGGCATTCGAATCCTGGGAAAGACTAAAATCGGCAAAGCGCCAAAAACAGCGCACCGCATC ACCACACATCAATCCATGCCGCTGTCAGAGCTGATGATTCCCTTTATGAAGCTCAGCAACAACGGCCATGGCGAAACGCT GATCAAGGAAATGGGAAGGGCCGCGAGACGTGAAGGAAGCTGGGATCAAGGGCTAGAGGTGTTAAATACGGAACTGCAGA GATTTGGACTGGACACGGAAAAAATCGTTCTCAGAGACGGCTCAGGCATCTCGCATATCAATTTGATTTCTGCACATCAG ATCACAAAGCTATTGTATTCCGTTCAAGACGAGAAATGGTTTCCGTCGTTTGCCCGTTCACTCCCAGTTGCAGGTGAAAG CGACAGAATGGTCGGCGGCACATTAAGAAACCGGCTGAAAGACCCGGCTCTAAAAGGAAAAGTCAGGGCGAAAACTGGCT CTCTTTCAACCGTCAGTTCCTTGTCGGGCTATGTCGATACTGCAAGCGGAAAGACATTGATTTTCTCCATTCTCCTCAAT CAGCTCGTGGATGATGAGAAAGGAAAGGATATTGAAGACAAAATCGTTCAAATATTAGCTTCTTCATGA
Upstream 100 bases:
>100_bases GTTCAGCCTGGCTTATTAATGGAAATGAAGCGCTACTTATAGTTTAAACTATAAGTGGTGCTTTTTTTTGCTTTAAATTT GACGGGCAAATGAAAATATT
Downstream 100 bases:
>100_bases CTTCTCCCATTGCAGCAGGCAATGGGTTTTCTTTAATTCATGTTTTGCTGCCGGCGGATTTAAAGGCTCTTGAGCTCTCC GAGCGGAAATGCTTCCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: DD-carboxypeptidase; DD-peptidase; Penicillin-binding protein 4a; PBP-4a [H]
Number of amino acids: Translated: 742; Mature: 742
Protein sequence:
>742_residues MVNLNQNILTRTESQLAFYGLAPFLLIIVTAAGVPLSAELTEFNITPYRHLIMSLAMLFIPLILGVMSGFILLDERDENM IQYFAVTPLSKRGYVMIRLILPMAMTLCYSILLFASGGLMAPGAVNLLFVLIMVTLEAPIYTLLLAAYVANKVEGLALMK GFSLLTLMPAAVYFIPVPWQLFGVFTLLDSENVLGGNIPRRAFSRFRDHRNCAAHYDTAVFIPEVFGENRPIGVYPAPFC NKVLKHKREAGYPMKKHMKLCLCMMMIFVLTLAGSMDGLGAEEKGGLKEQIDQLLKTEPDLKGALAGISVRSAESGKMIY GHMGDTRMRPASNLKLLTAAAAYSVLGEDYTFPTEVMADGARAAGTLKGSLYIKGKGDPTLLTADFQQMAKALRKQGITV IRGDLVGDDSWYDEIRYSQDLSWTDEDAYYGAQISALTVSPNEDYDAGTVIIDVNPAGKTGKKPAVLLTPQTNHVKIKND AKTVAADGKKDITIKRKHGGNTIQIKGTIPQGASRVRQWVAVWEPSEYALDLFKQALHQQGIRILGKTKIGKAPKTAHRI TTHQSMPLSELMIPFMKLSNNGHGETLIKEMGRAARREGSWDQGLEVLNTELQRFGLDTEKIVLRDGSGISHINLISAHQ ITKLLYSVQDEKWFPSFARSLPVAGESDRMVGGTLRNRLKDPALKGKVRAKTGSLSTVSSLSGYVDTASGKTLIFSILLN QLVDDEKGKDIEDKIVQILASS
Sequences:
>Translated_742_residues MVNLNQNILTRTESQLAFYGLAPFLLIIVTAAGVPLSAELTEFNITPYRHLIMSLAMLFIPLILGVMSGFILLDERDENM IQYFAVTPLSKRGYVMIRLILPMAMTLCYSILLFASGGLMAPGAVNLLFVLIMVTLEAPIYTLLLAAYVANKVEGLALMK GFSLLTLMPAAVYFIPVPWQLFGVFTLLDSENVLGGNIPRRAFSRFRDHRNCAAHYDTAVFIPEVFGENRPIGVYPAPFC NKVLKHKREAGYPMKKHMKLCLCMMMIFVLTLAGSMDGLGAEEKGGLKEQIDQLLKTEPDLKGALAGISVRSAESGKMIY GHMGDTRMRPASNLKLLTAAAAYSVLGEDYTFPTEVMADGARAAGTLKGSLYIKGKGDPTLLTADFQQMAKALRKQGITV IRGDLVGDDSWYDEIRYSQDLSWTDEDAYYGAQISALTVSPNEDYDAGTVIIDVNPAGKTGKKPAVLLTPQTNHVKIKND AKTVAADGKKDITIKRKHGGNTIQIKGTIPQGASRVRQWVAVWEPSEYALDLFKQALHQQGIRILGKTKIGKAPKTAHRI TTHQSMPLSELMIPFMKLSNNGHGETLIKEMGRAARREGSWDQGLEVLNTELQRFGLDTEKIVLRDGSGISHINLISAHQ ITKLLYSVQDEKWFPSFARSLPVAGESDRMVGGTLRNRLKDPALKGKVRAKTGSLSTVSSLSGYVDTASGKTLIFSILLN QLVDDEKGKDIEDKIVQILASS >Mature_742_residues MVNLNQNILTRTESQLAFYGLAPFLLIIVTAAGVPLSAELTEFNITPYRHLIMSLAMLFIPLILGVMSGFILLDERDENM IQYFAVTPLSKRGYVMIRLILPMAMTLCYSILLFASGGLMAPGAVNLLFVLIMVTLEAPIYTLLLAAYVANKVEGLALMK GFSLLTLMPAAVYFIPVPWQLFGVFTLLDSENVLGGNIPRRAFSRFRDHRNCAAHYDTAVFIPEVFGENRPIGVYPAPFC NKVLKHKREAGYPMKKHMKLCLCMMMIFVLTLAGSMDGLGAEEKGGLKEQIDQLLKTEPDLKGALAGISVRSAESGKMIY GHMGDTRMRPASNLKLLTAAAAYSVLGEDYTFPTEVMADGARAAGTLKGSLYIKGKGDPTLLTADFQQMAKALRKQGITV IRGDLVGDDSWYDEIRYSQDLSWTDEDAYYGAQISALTVSPNEDYDAGTVIIDVNPAGKTGKKPAVLLTPQTNHVKIKND AKTVAADGKKDITIKRKHGGNTIQIKGTIPQGASRVRQWVAVWEPSEYALDLFKQALHQQGIRILGKTKIGKAPKTAHRI TTHQSMPLSELMIPFMKLSNNGHGETLIKEMGRAARREGSWDQGLEVLNTELQRFGLDTEKIVLRDGSGISHINLISAHQ ITKLLYSVQDEKWFPSFARSLPVAGESDRMVGGTLRNRLKDPALKGKVRAKTGSLSTVSSLSGYVDTASGKTLIFSILLN QLVDDEKGKDIEDKIVQILASS
Specific function: Catalyzes DD-carboxypeptidase and transpeptidation reactions [H]
COG id: COG2027
COG function: function code M; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
Gene ontology:
Cell location: Secreted (Probable). Note=May be anchored in the membrane via a C-terminal amphiphatic alpha helix [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S13 family [H]
Homologues:
Organism=Escherichia coli, GI1789573, Length=397, Percent_Identity=28.7153652392947, Blast_Score=128, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR000667 [H]
Pfam domain/function: PF02113 Peptidase_S13 [H]
EC number: =3.4.16.4 [H]
Molecular weight: Translated: 81425; Mature: 81425
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNLNQNILTRTESQLAFYGLAPFLLIIVTAAGVPLSAELTEFNITPYRHLIMSLAMLFI CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHH PLILGVMSGFILLDERDENMIQYFAVTPLSKRGYVMIRLILPMAMTLCYSILLFASGGLM HHHHHHHCCEEEEECCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCC APGAVNLLFVLIMVTLEAPIYTLLLAAYVANKVEGLALMKGFSLLTLMPAAVYFIPVPWQ CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHH LFGVFTLLDSENVLGGNIPRRAFSRFRDHRNCAAHYDTAVFIPEVFGENRPIGVYPAPFC HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCEEEEHHHHCCCCCCCCCCCHHH NKVLKHKREAGYPMKKHMKLCLCMMMIFVLTLAGSMDGLGAEEKGGLKEQIDQLLKTEPD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC LKGALAGISVRSAESGKMIYGHMGDTRMRPASNLKLLTAAAAYSVLGEDYTFPTEVMADG HHHHHHCCEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCC ARAAGTLKGSLYIKGKGDPTLLTADFQQMAKALRKQGITVIRGDLVGDDSWYDEIRYSQD CHHCEEEEEEEEEEECCCCCEEEHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHCCC LSWTDEDAYYGAQISALTVSPNEDYDAGTVIIDVNPAGKTGKKPAVLLTPQTNHVKIKND CCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEECCC AKTVAADGKKDITIKRKHGGNTIQIKGTIPQGASRVRQWVAVWEPSEYALDLFKQALHQQ CCEEECCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC GIRILGKTKIGKAPKTAHRITTHQSMPLSELMIPFMKLSNNGHGETLIKEMGRAARREGS CCEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC WDQGLEVLNTELQRFGLDTEKIVLRDGSGISHINLISAHQITKLLYSVQDEKWFPSFARS HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHC LPVAGESDRMVGGTLRNRLKDPALKGKVRAKTGSLSTVSSLSGYVDTASGKTLIFSILLN CCCCCCCCCEECHHHHHHHCCCCCCCEEEECCCCCHHHHHHCCCEECCCCCHHHHHHHHH QLVDDEKGKDIEDKIVQILASS HHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MVNLNQNILTRTESQLAFYGLAPFLLIIVTAAGVPLSAELTEFNITPYRHLIMSLAMLFI CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHH PLILGVMSGFILLDERDENMIQYFAVTPLSKRGYVMIRLILPMAMTLCYSILLFASGGLM HHHHHHHCCEEEEECCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCC APGAVNLLFVLIMVTLEAPIYTLLLAAYVANKVEGLALMKGFSLLTLMPAAVYFIPVPWQ CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHH LFGVFTLLDSENVLGGNIPRRAFSRFRDHRNCAAHYDTAVFIPEVFGENRPIGVYPAPFC HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCEEEEHHHHCCCCCCCCCCCHHH NKVLKHKREAGYPMKKHMKLCLCMMMIFVLTLAGSMDGLGAEEKGGLKEQIDQLLKTEPD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC LKGALAGISVRSAESGKMIYGHMGDTRMRPASNLKLLTAAAAYSVLGEDYTFPTEVMADG HHHHHHCCEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCC ARAAGTLKGSLYIKGKGDPTLLTADFQQMAKALRKQGITVIRGDLVGDDSWYDEIRYSQD CHHCEEEEEEEEEEECCCCCEEEHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHCCC LSWTDEDAYYGAQISALTVSPNEDYDAGTVIIDVNPAGKTGKKPAVLLTPQTNHVKIKND CCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEECCC AKTVAADGKKDITIKRKHGGNTIQIKGTIPQGASRVRQWVAVWEPSEYALDLFKQALHQQ CCEEECCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC GIRILGKTKIGKAPKTAHRITTHQSMPLSELMIPFMKLSNNGHGETLIKEMGRAARREGS CCEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC WDQGLEVLNTELQRFGLDTEKIVLRDGSGISHINLISAHQITKLLYSVQDEKWFPSFARS HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHC LPVAGESDRMVGGTLRNRLKDPALKGKVRAKTGSLSTVSSLSGYVDTASGKTLIFSILLN CCCCCCCCCEECHHHHHHHCCCCCCCEEEECCCCCHHHHHHCCCEECCCCCHHHHHHHHH QLVDDEKGKDIEDKIVQILASS HHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7711903; 9384377 [H]