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The map label for this gene is ynfC [H]

Identifier: 52785822

GI number: 52785822

Start: 2008327

End: 2008671

Strand: Reverse

Name: ynfC [H]

Synonym: BLi02068

Alternate gene names: 52785822

Gene position: 2008671-2008327 (Counterclockwise)

Preceding gene: 52785824

Following gene: 52785821

Centisome position: 47.57

GC content: 43.77

Gene sequence:

>345_bases
ATGAAAAAGACATTGTTTCTGCAACTGTCCATATTCTTTTTAGTCATTGCGAGCCTTCATTCGTTCTCAATGCCCCAGAT
GCCGGCAAATCACCATGCGCAAAAAGCCGCTGTTTCAGGAGACGAACTCCATGAACTGACAGTCGGAAAATATGGTGAAG
AAAAGGCGAAATCATTATGGAATTCACTCGGTTTCGGAGCTGAATCCGTCCTTCTCTTAATCTTAGCTGCCGCTTCCGGT
CAAGCGTTCATGATGAACAGGCGGAAAGAGCATCTGAAGGCATTTATGCTCGCGGTGTTCTATCACTCTTCTTATTTCGA
TAAAGCGCATGTTTTAAAACCATAA

Upstream 100 bases:

>100_bases
AATGTTGTCAATAATTATTTGCAAACTGTCACAAAATAATCATCTTTTATTATATAATAAAATATGCTAAGATGATGAGA
TACTAAGGGGATGAGATCAA

Downstream 100 bases:

>100_bases
CCATACAAAAAAAGCGGGAGGTTTTAACATGTTATTTATCATAAGAATGGTGATTATTGGACTATTTTCATTGACAGCAA
TCAATCTGTTTGTTTTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MKKTLFLQLSIFFLVIASLHSFSMPQMPANHHAQKAAVSGDELHELTVGKYGEEKAKSLWNSLGFGAESVLLLILAAASG
QAFMMNRRKEHLKAFMLAVFYHSSYFDKAHVLKP

Sequences:

>Translated_114_residues
MKKTLFLQLSIFFLVIASLHSFSMPQMPANHHAQKAAVSGDELHELTVGKYGEEKAKSLWNSLGFGAESVLLLILAAASG
QAFMMNRRKEHLKAFMLAVFYHSSYFDKAHVLKP
>Mature_114_residues
MKKTLFLQLSIFFLVIASLHSFSMPQMPANHHAQKAAVSGDELHELTVGKYGEEKAKSLWNSLGFGAESVLLLILAAASG
QAFMMNRRKEHLKAFMLAVFYHSSYFDKAHVLKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12753; Mature: 12753

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLFLQLSIFFLVIASLHSFSMPQMPANHHAQKAAVSGDELHELTVGKYGEEKAKSLW
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCHHHHHHHH
NSLGFGAESVLLLILAAASGQAFMMNRRKEHLKAFMLAVFYHSSYFDKAHVLKP
HHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKTLFLQLSIFFLVIASLHSFSMPQMPANHHAQKAAVSGDELHELTVGKYGEEKAKSLW
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCHHHHHHHH
NSLGFGAESVLLLILAAASGQAFMMNRRKEHLKAFMLAVFYHSSYFDKAHVLKP
HHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969507; 9384377 [H]