Click here to switch to the map view.

The map label for this gene is ykuC [H]

Identifier: 52785378

GI number: 52785378

Start: 1582693

End: 1583994

Strand: Reverse

Name: ykuC [H]

Synonym: BLi01616

Alternate gene names: 52785378

Gene position: 1583994-1582693 (Counterclockwise)

Preceding gene: 52785379

Following gene: 52785377

Centisome position: 37.51

GC content: 47.08

Gene sequence:

>1302_bases
ATGGATCTTTTTAAAAATCGTAATTTCGTCCGACTTTTTTTCGCAGCTTTCGCTTCTCAAATGGGAACGACAGTCGGAAA
TATGGCTTTCGCCTTTTTCTTGCTCGACCGGTTCAGCAGCCAGCCGGCCTATACGACAATCGCCGAGCTGATGTATTCCT
TGCCGACGGTTTTCGTATTCTTTATCGTCGGGGTGGTCGCTGACCGTTTTGACCGCAAGAAAGTCGCGGAAAACTGTGAT
TGGATCAGAGCGGGACTGACTGTCGTTCTTTTCTTTGTATTGTATCTTCAAATTATACCGCTTGTGTTTTTAGTCCTATT
TATCAGAAGCGCGGTTACAAAATTTTTCTACCCGGCCGAAGCAAGTTTGGTCCAGGCCATTTTAAGAAAGGACCAGTATG
CAAAGGCTGCAGGACTGAACCAGATGCTTTTCAGCCTGTTTCTATTGTTCGGCGTAGGAATTGGAGCATTTATGTACAAG
ACGATCGGCTTGCATGGAGCAATCGCTCTTGATTTTGTGAGCTTTATCGTCTCCGGCTTTTTAATCCGTTCCTGCGATAT
ACCGCTTGCAGCGCGGAAGCCGAACGGAAATAAAGGCTGGAAAAACATGACCGTCAAAGATTCGATGCGCGATTTTAAGG
AAGGCATCGTTTATATATTAAAAAATAAATTGCTTGCCTCTCTTGTATTCGGATATTTTATTTTCGGGCTTGTAAGCGGC
GGACTTTCGGTTCTGCCGATGTTTAAAATGAAGTATGAGCTGTCCCCTGACAGTTATGAGTGGCATACTTCCCTCTTCAC
AATCGTACTGGGCATCGGACTTTTGACTGGGATTGCCGTCGCCGCCCTGCTCGAAAAAAAAGTGAAGCCGGCATACATGA
TGTCAGTCCCGATTTTTATCGCGGGTGCCTTTATCATCCTGCTTGGCTTTACAGATCAATTGCCCGTATACTACTCGGCT
GCATTTCTTGCCGGGATATGCATCGGGCCGATCAACACAGCTCTTGGCGGCTGGATTCCCAAAATCGTCCATCCAAGGCT
GATGGGAAGGGTCAGCGGGTGGACCGATCCGCTGACAATGCTGGCGCAATCCTCAGCGCTTGGCATGATCGCTGTCCTAT
TCCCGGGAATCATCGCCGATGTGGATTATATATATTACGGCTTGGCGGGAATTATTCTGCTGGCGGCGCTGTACTACTTT
ATCGCCCTGCCTAAATTAAGCGCCGAGAGTGCGGAAATCGACGTTCAAGCGGCGCTGAAGAGACAAAAAAATACAAAAGC
GAAAATGAACTCTGTTTTATAA

Upstream 100 bases:

>100_bases
ATTACACCTTAGACGAGTACATTTCCAGACAAATGCAATTTGAACAATACAACATCTTGTATTAAGATATAATGGGACCT
TTAGGGTAAGGAGCGTATAT

Downstream 100 bases:

>100_bases
AGATGAAAACGCGCGATTCCATAAAAAATCGCGCGTTTTTTCTATGGGATATTTGCATTTTCTGTTCTATTTCGTATAAT
TTAGACATAAGCCTTGCATC

Product: YkuC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MDLFKNRNFVRLFFAAFASQMGTTVGNMAFAFFLLDRFSSQPAYTTIAELMYSLPTVFVFFIVGVVADRFDRKKVAENCD
WIRAGLTVVLFFVLYLQIIPLVFLVLFIRSAVTKFFYPAEASLVQAILRKDQYAKAAGLNQMLFSLFLLFGVGIGAFMYK
TIGLHGAIALDFVSFIVSGFLIRSCDIPLAARKPNGNKGWKNMTVKDSMRDFKEGIVYILKNKLLASLVFGYFIFGLVSG
GLSVLPMFKMKYELSPDSYEWHTSLFTIVLGIGLLTGIAVAALLEKKVKPAYMMSVPIFIAGAFIILLGFTDQLPVYYSA
AFLAGICIGPINTALGGWIPKIVHPRLMGRVSGWTDPLTMLAQSSALGMIAVLFPGIIADVDYIYYGLAGIILLAALYYF
IALPKLSAESAEIDVQAALKRQKNTKAKMNSVL

Sequences:

>Translated_433_residues
MDLFKNRNFVRLFFAAFASQMGTTVGNMAFAFFLLDRFSSQPAYTTIAELMYSLPTVFVFFIVGVVADRFDRKKVAENCD
WIRAGLTVVLFFVLYLQIIPLVFLVLFIRSAVTKFFYPAEASLVQAILRKDQYAKAAGLNQMLFSLFLLFGVGIGAFMYK
TIGLHGAIALDFVSFIVSGFLIRSCDIPLAARKPNGNKGWKNMTVKDSMRDFKEGIVYILKNKLLASLVFGYFIFGLVSG
GLSVLPMFKMKYELSPDSYEWHTSLFTIVLGIGLLTGIAVAALLEKKVKPAYMMSVPIFIAGAFIILLGFTDQLPVYYSA
AFLAGICIGPINTALGGWIPKIVHPRLMGRVSGWTDPLTMLAQSSALGMIAVLFPGIIADVDYIYYGLAGIILLAALYYF
IALPKLSAESAEIDVQAALKRQKNTKAKMNSVL
>Mature_433_residues
MDLFKNRNFVRLFFAAFASQMGTTVGNMAFAFFLLDRFSSQPAYTTIAELMYSLPTVFVFFIVGVVADRFDRKKVAENCD
WIRAGLTVVLFFVLYLQIIPLVFLVLFIRSAVTKFFYPAEASLVQAILRKDQYAKAAGLNQMLFSLFLLFGVGIGAFMYK
TIGLHGAIALDFVSFIVSGFLIRSCDIPLAARKPNGNKGWKNMTVKDSMRDFKEGIVYILKNKLLASLVFGYFIFGLVSG
GLSVLPMFKMKYELSPDSYEWHTSLFTIVLGIGLLTGIAVAALLEKKVKPAYMMSVPIFIAGAFIILLGFTDQLPVYYSA
AFLAGICIGPINTALGGWIPKIVHPRLMGRVSGWTDPLTMLAQSSALGMIAVLFPGIIADVDYIYYGLAGIILLAALYYF
IALPKLSAESAEIDVQAALKRQKNTKAKMNSVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004751
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47825; Mature: 47825

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]