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The map label for this gene is ydiF [H]

Identifier: 52784761

GI number: 52784761

Start: 990321

End: 991949

Strand: Direct

Name: ydiF [H]

Synonym: BLi00989

Alternate gene names: 52784761

Gene position: 990321-991949 (Clockwise)

Preceding gene: 52784760

Following gene: 52784762

Centisome position: 23.45

GC content: 48.86

Gene sequence:

>1629_bases
ATGATTATATGCAGTTTGCAACATGTCGGTCAAACTTACGGAGGACATACGATTTTCAACGGGCTGTCATGGGACCTGCA
CCAAGGGGAGCGCGTCGGTCTGATCGGACGAAATGGGGAAGGGAAAACGACGTTGTTGAAGCTGATCAGCGGCCAAATGA
AACCTGATGAAGGTCTTGTGACATGGAAAAAAGGATTATCAACAGGGCTCTTGGAGCAGAATCCCGCATGGGACGGCAGC
AAAACGGTAAAAGAGCTGCTGTATGATGTTTTTTCATCATTATGGAACACACAGCAGAAGCTTTCCCGGATCGAACGTCA
ATTGGCGGTTGAAAAGGACGCGGAAAAACTCAGATTCCTTTTGGAAAAGTACGGGGCTTTGCAGGATGAATTTCAGCGAA
AAGGCGGCTACGGCATCAGCGCGCAAATCGAACGGGTGGCGCACGGCTTGAATATCGAGCGGCTATTCGATGCCGAGTGG
CGGGAGTTAAGCGGAGGCGAACGGACGAAAGCGGGTCTTGCAAGGCTTCTCCTGTCAGCTCCGGATCTGCTTTTGCTGGA
TGAGCCGACAAACCATTTGGATTTAACATCGATCGAATGGCTGACGTCTTTTTTAAAGCAGTACAAAGGTACTGCGGTCA
TTGTGTCGCATGATCGCTATTTCCTGGATGAATCGGTTACTTCGATTCTCGAAATCGACCAAGGAGAGCTTCACTTTTCA
AAAGGCGGCTATACACACTATGCTGATGAACGGGAAGAGCGCCTTATGAGAGAATTTCATGACTATCAGGATCAGCAGAA
GAAAATCAAAAAAATGAAGGAAACAATCAAGCGGCTGAAGGAATGGGCGAATCGCGCCAATCCTCCGAATGACGGCCTGC
ACCGAAGAGCGAAAAGTATGGAAAAAGCTTTGGAGCGCATGGAGAAGGTGAAAAAACCCGTTCTGGAACGCAAAAAGATC
GACTTAGTTTTCAGCATGGATGAACGAAGCGGAAAAGATGTTGTCAGGCTTGAGGATGTCTGCAAAAGCTTCGGTGAGCG
GCAGCTTTTTGACAATCTCAGTATGCATGTCCGTTTTCAGGAGCGCGCCGCCATCGTCGGAGAGAACGGCAGCGGCAAAA
CGACGCTGCTCAACATCATCAGCGGAAAGGAAACGCCGGACAGCGGTGACGTGCAGCTTGGCAGCAATTTATCGGCCGCA
TATCTGACTCAGCATGTCGGTGAAATGGAGGAAGAGCGCACCGTTTTAGCCGAATTCCGTGAACATGTTTCTGCATCAGA
AGGCGAAGCCAGAATGATGCTTGCAAAGTTTTTGTTTTTCGGCCAATCCGTCTTCCGAAAAGTGAAAGATTTAAGCGGAG
GCGAACGGATGCGGCTTCGCTTGGCACAGCTCGTTCACCAAAATCATAATGTGCTGATCCTCGATGAGCCGACAAACCAT
TTGGACATCGAATCTAAGGAGATGCTTGAAGAAGCATTAAGCCAATTTCAAGGGACGATTATTGCGGTTTCGCATGACAG
GTACTTTCTTGACCGGCTTTTCAATGTCATCTGGTGGCTTGACGGCAGAAAACTCGTCAAGTATGAAGGAAACTATACAT
TCGCAAGGGAGAAGCGGCAGCAGGGTTGA

Upstream 100 bases:

>100_bases
ATCTGCCCACAATCGGATTTTCTGATGCTGACGGCGGGGTGTAAGCTCTGCCGTCTTTTTAATGCTCGGTGTCTCTTCAC
GGGATGCGGAGGAAAGATGG

Downstream 100 bases:

>100_bases
CACATTTTTATCACATTTGATAAGATGTTGCTACAGTTATAGAAGACAAAAGCAATGGAATGTATGCACGAACTGTATAT
ATTCTCTTTCAATATTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MIICSLQHVGQTYGGHTIFNGLSWDLHQGERVGLIGRNGEGKTTLLKLISGQMKPDEGLVTWKKGLSTGLLEQNPAWDGS
KTVKELLYDVFSSLWNTQQKLSRIERQLAVEKDAEKLRFLLEKYGALQDEFQRKGGYGISAQIERVAHGLNIERLFDAEW
RELSGGERTKAGLARLLLSAPDLLLLDEPTNHLDLTSIEWLTSFLKQYKGTAVIVSHDRYFLDESVTSILEIDQGELHFS
KGGYTHYADEREERLMREFHDYQDQQKKIKKMKETIKRLKEWANRANPPNDGLHRRAKSMEKALERMEKVKKPVLERKKI
DLVFSMDERSGKDVVRLEDVCKSFGERQLFDNLSMHVRFQERAAIVGENGSGKTTLLNIISGKETPDSGDVQLGSNLSAA
YLTQHVGEMEEERTVLAEFREHVSASEGEARMMLAKFLFFGQSVFRKVKDLSGGERMRLRLAQLVHQNHNVLILDEPTNH
LDIESKEMLEEALSQFQGTIIAVSHDRYFLDRLFNVIWWLDGRKLVKYEGNYTFAREKRQQG

Sequences:

>Translated_542_residues
MIICSLQHVGQTYGGHTIFNGLSWDLHQGERVGLIGRNGEGKTTLLKLISGQMKPDEGLVTWKKGLSTGLLEQNPAWDGS
KTVKELLYDVFSSLWNTQQKLSRIERQLAVEKDAEKLRFLLEKYGALQDEFQRKGGYGISAQIERVAHGLNIERLFDAEW
RELSGGERTKAGLARLLLSAPDLLLLDEPTNHLDLTSIEWLTSFLKQYKGTAVIVSHDRYFLDESVTSILEIDQGELHFS
KGGYTHYADEREERLMREFHDYQDQQKKIKKMKETIKRLKEWANRANPPNDGLHRRAKSMEKALERMEKVKKPVLERKKI
DLVFSMDERSGKDVVRLEDVCKSFGERQLFDNLSMHVRFQERAAIVGENGSGKTTLLNIISGKETPDSGDVQLGSNLSAA
YLTQHVGEMEEERTVLAEFREHVSASEGEARMMLAKFLFFGQSVFRKVKDLSGGERMRLRLAQLVHQNHNVLILDEPTNH
LDIESKEMLEEALSQFQGTIIAVSHDRYFLDRLFNVIWWLDGRKLVKYEGNYTFAREKRQQG
>Mature_542_residues
MIICSLQHVGQTYGGHTIFNGLSWDLHQGERVGLIGRNGEGKTTLLKLISGQMKPDEGLVTWKKGLSTGLLEQNPAWDGS
KTVKELLYDVFSSLWNTQQKLSRIERQLAVEKDAEKLRFLLEKYGALQDEFQRKGGYGISAQIERVAHGLNIERLFDAEW
RELSGGERTKAGLARLLLSAPDLLLLDEPTNHLDLTSIEWLTSFLKQYKGTAVIVSHDRYFLDESVTSILEIDQGELHFS
KGGYTHYADEREERLMREFHDYQDQQKKIKKMKETIKRLKEWANRANPPNDGLHRRAKSMEKALERMEKVKKPVLERKKI
DLVFSMDERSGKDVVRLEDVCKSFGERQLFDNLSMHVRFQERAAIVGENGSGKTTLLNIISGKETPDSGDVQLGSNLSAA
YLTQHVGEMEEERTVLAEFREHVSASEGEARMMLAKFLFFGQSVFRKVKDLSGGERMRLRLAQLVHQNHNVLILDEPTNH
LDIESKEMLEEALSQFQGTIIAVSHDRYFLDRLFNVIWWLDGRKLVKYEGNYTFAREKRQQG

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=531, Percent_Identity=31.0734463276836, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI10947137, Length=543, Percent_Identity=29.6500920810313, Blast_Score=205, Evalue=1e-52,
Organism=Homo sapiens, GI27881506, Length=543, Percent_Identity=29.6500920810313, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI10947135, Length=532, Percent_Identity=30.4511278195489, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI69354671, Length=532, Percent_Identity=30.4511278195489, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI171184400, Length=231, Percent_Identity=25.1082251082251, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI2367384, Length=541, Percent_Identity=34.5656192236599, Blast_Score=302, Evalue=4e-83,
Organism=Escherichia coli, GI1787182, Length=549, Percent_Identity=33.6976320582878, Blast_Score=265, Evalue=6e-72,
Organism=Escherichia coli, GI1787041, Length=539, Percent_Identity=31.9109461966605, Blast_Score=256, Evalue=3e-69,
Organism=Escherichia coli, GI1789751, Length=524, Percent_Identity=30.9160305343511, Blast_Score=248, Evalue=6e-67,
Organism=Escherichia coli, GI1788165, Length=181, Percent_Identity=27.0718232044199, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1790739, Length=195, Percent_Identity=31.2820512820513, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI87081834, Length=220, Percent_Identity=29.0909090909091, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789891, Length=230, Percent_Identity=25.6521739130435, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1788225, Length=222, Percent_Identity=28.8288288288288, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788761, Length=196, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786345, Length=204, Percent_Identity=29.9019607843137, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1787758, Length=208, Percent_Identity=26.9230769230769, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787029, Length=224, Percent_Identity=25.8928571428571, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1789873, Length=202, Percent_Identity=25.7425742574257, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788002, Length=216, Percent_Identity=31.9444444444444, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786703, Length=220, Percent_Identity=28.1818181818182, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787712, Length=197, Percent_Identity=27.9187817258883, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=526, Percent_Identity=29.467680608365, Blast_Score=219, Evalue=4e-57,
Organism=Caenorhabditis elegans, GI17553372, Length=535, Percent_Identity=32.5233644859813, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17555318, Length=545, Percent_Identity=30.6422018348624, Blast_Score=214, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI193208177, Length=202, Percent_Identity=25.7425742574257, Blast_Score=69, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=543, Percent_Identity=29.6500920810313, Blast_Score=211, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6321121, Length=539, Percent_Identity=30.2411873840445, Blast_Score=202, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6325030, Length=402, Percent_Identity=27.1144278606965, Blast_Score=129, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6324314, Length=394, Percent_Identity=24.8730964467005, Blast_Score=110, Evalue=6e-25,
Organism=Saccharomyces cerevisiae, GI6323278, Length=394, Percent_Identity=26.6497461928934, Blast_Score=108, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24666836, Length=532, Percent_Identity=31.7669172932331, Blast_Score=227, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24642252, Length=527, Percent_Identity=29.6015180265655, Blast_Score=216, Evalue=5e-56,
Organism=Drosophila melanogaster, GI18859989, Length=527, Percent_Identity=29.6015180265655, Blast_Score=216, Evalue=5e-56,
Organism=Drosophila melanogaster, GI24641342, Length=528, Percent_Identity=29.3560606060606, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI116007328, Length=179, Percent_Identity=29.608938547486, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI28574150, Length=179, Percent_Identity=29.608938547486, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 62215; Mature: 62215

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIICSLQHVGQTYGGHTIFNGLSWDLHQGERVGLIGRNGEGKTTLLKLISGQMKPDEGLV
CEEECCHHHHHHCCCCHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCH
TWKKGLSTGLLEQNPAWDGSKTVKELLYDVFSSLWNTQQKLSRIERQLAVEKDAEKLRFL
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKYGALQDEFQRKGGYGISAQIERVAHGLNIERLFDAEWRELSGGERTKAGLARLLLSA
HHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHCCHHHHCCCCCHHHHHHHHHHHCC
PDLLLLDEPTNHLDLTSIEWLTSFLKQYKGTAVIVSHDRYFLDESVTSILEIDQGELHFS
CCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEC
KGGYTHYADEREERLMREFHDYQDQQKKIKKMKETIKRLKEWANRANPPNDGLHRRAKSM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
EKALERMEKVKKPVLERKKIDLVFSMDERSGKDVVRLEDVCKSFGERQLFDNLSMHVRFQ
HHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHCCHHEEEEE
ERAAIVGENGSGKTTLLNIISGKETPDSGDVQLGSNLSAAYLTQHVGEMEEERTVLAEFR
CCEEEECCCCCCCEEEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
EHVSASEGEARMMLAKFLFFGQSVFRKVKDLSGGERMRLRLAQLVHQNHNVLILDEPTNH
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCC
LDIESKEMLEEALSQFQGTIIAVSHDRYFLDRLFNVIWWLDGRKLVKYEGNYTFAREKRQ
CCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCEEEHHHHHC
QG
CC
>Mature Secondary Structure
MIICSLQHVGQTYGGHTIFNGLSWDLHQGERVGLIGRNGEGKTTLLKLISGQMKPDEGLV
CEEECCHHHHHHCCCCHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCH
TWKKGLSTGLLEQNPAWDGSKTVKELLYDVFSSLWNTQQKLSRIERQLAVEKDAEKLRFL
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKYGALQDEFQRKGGYGISAQIERVAHGLNIERLFDAEWRELSGGERTKAGLARLLLSA
HHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHCCHHHHCCCCCHHHHHHHHHHHCC
PDLLLLDEPTNHLDLTSIEWLTSFLKQYKGTAVIVSHDRYFLDESVTSILEIDQGELHFS
CCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEC
KGGYTHYADEREERLMREFHDYQDQQKKIKKMKETIKRLKEWANRANPPNDGLHRRAKSM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
EKALERMEKVKKPVLERKKIDLVFSMDERSGKDVVRLEDVCKSFGERQLFDNLSMHVRFQ
HHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHCCHHEEEEE
ERAAIVGENGSGKTTLLNIISGKETPDSGDVQLGSNLSAAYLTQHVGEMEEERTVLAEFR
CCEEEECCCCCCCEEEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
EHVSASEGEARMMLAKFLFFGQSVFRKVKDLSGGERMRLRLAQLVHQNHNVLILDEPTNH
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCC
LDIESKEMLEEALSQFQGTIIAVSHDRYFLDRLFNVIWWLDGRKLVKYEGNYTFAREKRQ
CCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCEEEHHHHHC
QG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]