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The map label for this gene is yhcS [H]

Identifier: 52784755

GI number: 52784755

Start: 984959

End: 985549

Strand: Direct

Name: yhcS [H]

Synonym: BLi00983

Alternate gene names: 52784755

Gene position: 984959-985549 (Clockwise)

Preceding gene: 52784754

Following gene: 52784757

Centisome position: 23.33

GC content: 47.55

Gene sequence:

>591_bases
ATGAAAGTCAAGATGTTATCGTTTCTGCTGATGATAGCGGGGCTTGCCACTTTTGCATACGGCGGCTGGAAAATATTCGA
TATGAACAGACAGACGGATCTTTCTTTAACTGAAGCAAAAGAAGCCATTGCATCGAGTCAATCCGCCCGTTCGGCTAAGC
ACCCATCGGCGCCCGCTTCATTTAAGCCCGCCGCCGGCGAAGCGGCAGGCATACTCCATATTCCCAAACTGGGCGCAGAG
CTTCCCATCGTTGAAGGGACCAGTCCCGATGATTTGGAAAAAGGCGTCGGTCATTATAAAGGCAGCTATTATCCAAAACA
AAACGGGCAAATTGTTCTTTCAGGCCACAGGGATACGGTTTTTCGCAGAACAGGGGAGCTGGAAATCGGAGATAAGCTGA
AAATCGAGCTTCCATACGGAAGCTTCGAATATGAAATCACACACACGAAAATTGTTGACCAAAGTGACACGTCCATCATC
ACGCTGCAGCGTGAAAAAGAAGAGCTGCTGTTAACGACATGCTATCCGTTTTCTTATATCGGAAATGCGCCTGAGCGCTA
TATTATTTATGCAAAGCCGCTGAAAGGATGA

Upstream 100 bases:

>100_bases
CCGATACGGCGGCAGCTTACGGCGGTTTCCTTTTATACGGCTTCCTGACGTTTATGTTCGGAGCGATTCTTTATATGCGG
AAAAGGGGTATTGCGAGACT

Downstream 100 bases:

>100_bases
CAAAATCCCAAAACAAAAAGCCGTTTTGGGATTTTGTCAACAATCTGTAAGGCTGTCCCATCGAGGACAGCTTTTTTACC
GTTTAATCAACCGTGCCGAA

Product: YhcS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKVKMLSFLLMIAGLATFAYGGWKIFDMNRQTDLSLTEAKEAIASSQSARSAKHPSAPASFKPAAGEAAGILHIPKLGAE
LPIVEGTSPDDLEKGVGHYKGSYYPKQNGQIVLSGHRDTVFRRTGELEIGDKLKIELPYGSFEYEITHTKIVDQSDTSII
TLQREKEELLLTTCYPFSYIGNAPERYIIYAKPLKG

Sequences:

>Translated_196_residues
MKVKMLSFLLMIAGLATFAYGGWKIFDMNRQTDLSLTEAKEAIASSQSARSAKHPSAPASFKPAAGEAAGILHIPKLGAE
LPIVEGTSPDDLEKGVGHYKGSYYPKQNGQIVLSGHRDTVFRRTGELEIGDKLKIELPYGSFEYEITHTKIVDQSDTSII
TLQREKEELLLTTCYPFSYIGNAPERYIIYAKPLKG
>Mature_196_residues
MKVKMLSFLLMIAGLATFAYGGWKIFDMNRQTDLSLTEAKEAIASSQSARSAKHPSAPASFKPAAGEAAGILHIPKLGAE
LPIVEGTSPDDLEKGVGHYKGSYYPKQNGQIVLSGHRDTVFRRTGELEIGDKLKIELPYGSFEYEITHTKIVDQSDTSII
TLQREKEELLLTTCYPFSYIGNAPERYIIYAKPLKG

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 21614; Mature: 21614

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKMLSFLLMIAGLATFAYGGWKIFDMNRQTDLSLTEAKEAIASSQSARSAKHPSAPAS
CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCC
FKPAAGEAAGILHIPKLGAELPIVEGTSPDDLEKGVGHYKGSYYPKQNGQIVLSGHRDTV
CCCCCCCCCCEEEECCCCCCCCEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEE
FRRTGELEIGDKLKIELPYGSFEYEITHTKIVDQSDTSIITLQREKEELLLTTCYPFSYI
EEECCCEEECCEEEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCEEEEEEECCHHHH
GNAPERYIIYAKPLKG
CCCCCEEEEEEECCCC
>Mature Secondary Structure
MKVKMLSFLLMIAGLATFAYGGWKIFDMNRQTDLSLTEAKEAIASSQSARSAKHPSAPAS
CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCC
FKPAAGEAAGILHIPKLGAELPIVEGTSPDDLEKGVGHYKGSYYPKQNGQIVLSGHRDTV
CCCCCCCCCCEEEECCCCCCCCEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEE
FRRTGELEIGDKLKIELPYGSFEYEITHTKIVDQSDTSIITLQREKEELLLTTCYPFSYI
EEECCCEEECCEEEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCEEEEEEECCHHHH
GNAPERYIIYAKPLKG
CCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]