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The map label for this gene is yhbA [H]

Identifier: 52784727

GI number: 52784727

Start: 954357

End: 955505

Strand: Direct

Name: yhbA [H]

Synonym: BLi00955

Alternate gene names: 52784727

Gene position: 954357-955505 (Clockwise)

Preceding gene: 52784725

Following gene: 52784728

Centisome position: 22.6

GC content: 50.65

Gene sequence:

>1149_bases
ATGGATGTGAAAAAACTGAAACAGGATGTCATCGAATTCGCACAGCAAATCGGCATTGATAAAATCCGGTTCGCCAGTGC
AGATACATTTGAAACATTAAAAGAACGATTGATTGAGAACCGGGCCCTTGGCTATGAATCAGGCTTTGAAGAACCCGATC
TTGAAAAACGGACGAACCCGGATCTGCTTTTGCCGAAGGCGAAGTCGATTATCGCCATCGCCCTTGCATACCCCTCAAAA
ATGAAAGACGCGCCGAGAAGCAAGAAAGGCGAACGAAGGGGCATCTTTTGCAGAGCTTCCTGGGGAAAGGATTATCATCA
TGTCCTGCGCGAAAAGCTTGATCAGCTTGAAGAATTTTTGAAAGCACAGCGAAGCGATGTCAGAACGAAGTCGATGGTGG
ACACCGGTGAGCTTTCAGACAGAGCTGTCGCAGAGCGTGCGGGCATCGGCTGGAGCGGAAAGAACTGCATGATCATTACG
CCTGAATTCGGATCTTACGTTTACTTGGCGGAAATGATTACGAATATTCCCTTTGAGCCTGATGAGAGGATCGAAGACCA
ATGCGGCTCATGCAACAAGTGCATCGAGGCATGCCCGACCGGCGCGCTCGTCAAGCCTGGGCAGCTCAACTCCCAGCGCT
GCATCGCTTTTCAGACGCAGACAAAGGGTTTTCTGCCTGACGAGTTCCGTACGAAAATCGGAAACAGGATCTACGGCTGT
GATACGTGCCAGATGGTATGCCCGAAAAATAAAGGGGTCGATTTTCATCTGCATCCTGAAATGGAGCCGGACCCTGAGAT
TGCCAAGCCGCTTTTAAAGCCGCTTCTGACGATGTCGAATCGCGAATTCAAAGAAAAGTTCGGCCACGTGGCCGGCTCAT
GGAGAGGCAAAAAGCCGATTCAGAGAAATGCGATTATCGCACTTGCCCATTTTAAAGAAACGGACGCTCTCCCTGAACTG
ATTGAGCTGATGCACAAAGATCCGCGGCCGGTCATCAGGGGAACCGCCGCATGGGCTGTCGGAAAGATCGGCGGAGCGGA
TGTGATGAGTGAATTGGAGCGCGCGCTCGCGCACGAGCAGGATGAAGACGCAAAAGCTGAAATTCAAAAAGGCATCGGCC
TGTTAAAAGAAACGAGTGCGACTAATTGA

Upstream 100 bases:

>100_bases
ATTTGCAAACGAAGTTCCAATTTTAATTCAACTCCCGTGTCATGGTACACTCTATTATACAGAGAGCGAAAACGAAAACA
AAGAAAGGAGGCTCTGCGCG

Downstream 100 bases:

>100_bases
GGGCTGTCCTGACATATGTTTAATGATGAGAAACGAATTAACAAACATATGGTGGTGTAGCCCTTGAAACAGATCATCGA
GCAGCTCCTGAAAGCCAGAC

Product: YhbA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MDVKKLKQDVIEFAQQIGIDKIRFASADTFETLKERLIENRALGYESGFEEPDLEKRTNPDLLLPKAKSIIAIALAYPSK
MKDAPRSKKGERRGIFCRASWGKDYHHVLREKLDQLEEFLKAQRSDVRTKSMVDTGELSDRAVAERAGIGWSGKNCMIIT
PEFGSYVYLAEMITNIPFEPDERIEDQCGSCNKCIEACPTGALVKPGQLNSQRCIAFQTQTKGFLPDEFRTKIGNRIYGC
DTCQMVCPKNKGVDFHLHPEMEPDPEIAKPLLKPLLTMSNREFKEKFGHVAGSWRGKKPIQRNAIIALAHFKETDALPEL
IELMHKDPRPVIRGTAAWAVGKIGGADVMSELERALAHEQDEDAKAEIQKGIGLLKETSATN

Sequences:

>Translated_382_residues
MDVKKLKQDVIEFAQQIGIDKIRFASADTFETLKERLIENRALGYESGFEEPDLEKRTNPDLLLPKAKSIIAIALAYPSK
MKDAPRSKKGERRGIFCRASWGKDYHHVLREKLDQLEEFLKAQRSDVRTKSMVDTGELSDRAVAERAGIGWSGKNCMIIT
PEFGSYVYLAEMITNIPFEPDERIEDQCGSCNKCIEACPTGALVKPGQLNSQRCIAFQTQTKGFLPDEFRTKIGNRIYGC
DTCQMVCPKNKGVDFHLHPEMEPDPEIAKPLLKPLLTMSNREFKEKFGHVAGSWRGKKPIQRNAIIALAHFKETDALPEL
IELMHKDPRPVIRGTAAWAVGKIGGADVMSELERALAHEQDEDAKAEIQKGIGLLKETSATN
>Mature_382_residues
MDVKKLKQDVIEFAQQIGIDKIRFASADTFETLKERLIENRALGYESGFEEPDLEKRTNPDLLLPKAKSIIAIALAYPSK
MKDAPRSKKGERRGIFCRASWGKDYHHVLREKLDQLEEFLKAQRSDVRTKSMVDTGELSDRAVAERAGIGWSGKNCMIIT
PEFGSYVYLAEMITNIPFEPDERIEDQCGSCNKCIEACPTGALVKPGQLNSQRCIAFQTQTKGFLPDEFRTKIGNRIYGC
DTCQMVCPKNKGVDFHLHPEMEPDPEIAKPLLKPLLTMSNREFKEKFGHVAGSWRGKKPIQRNAIIALAHFKETDALPEL
IELMHKDPRPVIRGTAAWAVGKIGGADVMSELERALAHEQDEDAKAEIQKGIGLLKETSATN

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=344, Percent_Identity=28.4883720930233, Blast_Score=177, Evalue=9e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 42873; Mature: 42873

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVKKLKQDVIEFAQQIGIDKIRFASADTFETLKERLIENRALGYESGFEEPDLEKRTNP
CCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
DLLLPKAKSIIAIALAYPSKMKDAPRSKKGERRGIFCRASWGKDYHHVLREKLDQLEEFL
CEECCCCCCEEEEEECCCHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
KAQRSDVRTKSMVDTGELSDRAVAERAGIGWSGKNCMIITPEFGSYVYLAEMITNIPFEP
HHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCC
DERIEDQCGSCNKCIEACPTGALVKPGQLNSQRCIAFQTQTKGFLPDEFRTKIGNRIYGC
CHHHHHHCCCHHHHHHHCCCCCEECCCCCCCCEEEEEECCCCCCCCHHHHHHHCCEEECC
DTCQMVCPKNKGVDFHLHPEMEPDPEIAKPLLKPLLTMSNREFKEKFGHVAGSWRGKKPI
CCHHEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
QRNAIIALAHFKETDALPELIELMHKDPRPVIRGTAAWAVGKIGGADVMSELERALAHEQ
CCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHCCCCHHHHHHHHHHHHCCC
DEDAKAEIQKGIGLLKETSATN
CCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDVKKLKQDVIEFAQQIGIDKIRFASADTFETLKERLIENRALGYESGFEEPDLEKRTNP
CCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
DLLLPKAKSIIAIALAYPSKMKDAPRSKKGERRGIFCRASWGKDYHHVLREKLDQLEEFL
CEECCCCCCEEEEEECCCHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
KAQRSDVRTKSMVDTGELSDRAVAERAGIGWSGKNCMIITPEFGSYVYLAEMITNIPFEP
HHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCC
DERIEDQCGSCNKCIEACPTGALVKPGQLNSQRCIAFQTQTKGFLPDEFRTKIGNRIYGC
CHHHHHHCCCHHHHHHHCCCCCEECCCCCCCCEEEEEECCCCCCCCHHHHHHHCCEEECC
DTCQMVCPKNKGVDFHLHPEMEPDPEIAKPLLKPLLTMSNREFKEKFGHVAGSWRGKKPI
CCHHEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
QRNAIIALAHFKETDALPELIELMHKDPRPVIRGTAAWAVGKIGGADVMSELERALAHEQ
CCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHCCCCHHHHHHHHHHHHCCC
DEDAKAEIQKGIGLLKETSATN
CCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]