Definition | Bacillus licheniformis ATCC 14580, complete genome. |
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Accession | NC_006322 |
Length | 4,222,645 |
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The map label for this gene is ycbL [C]
Identifier: 52784581
GI number: 52784581
Start: 793645
End: 794427
Strand: Reverse
Name: ycbL [C]
Synonym: BLi00782
Alternate gene names: 52784581
Gene position: 794427-793645 (Counterclockwise)
Preceding gene: 52784585
Following gene: 52784577
Centisome position: 18.81
GC content: 51.85
Gene sequence:
>783_bases ATGGCAGATAGTCAGTGGTTTACTGTGACAGAGCTTGATGAATCCACATATGCGATCAGCGAATACGGGCATTGGGAAAA AGTACACTCTTATTTGCTTATAGGGGCGAAGGATGCCGTTTTAATTGATACGGGTCTTGGCATCGGCAGCATGAAGACGG TGACGGACGGTCTGACCGATCTGCCGGTCAGCGTCATCACAACCCATGTCCATTGGGATCACATCGGAAGCCACGATGAA TATCAGCGCATTTACGTCCATGAAGCTGAGAGAGAATGGCTGACGGACGGAATCAAAGGACTTCCGATCGAGCAAATTCG CCGCGATGTCTCGAGAGATATCACCAAGCCTGTTCCGGCCGGCTTTTCCGCTGAAACATACACCCCGTTCAGAGGCGAAC CGTCGGGAACGCTGCAAGACGGAGATACGGTCGGCTGCGACTCAAGGCCGCTTGTTATTTATCATACGCCTGGACACTCC CCGGGGCATATTTGCATCTTTGATCCAGCGTCAGGCTACTTGTTTACCGGCGATCTGCTGTATACCGGAGCTCCAATCTA TGCATTCTATCCGACGACTGATCCGGCTCAACTGGTTCAGTCGCTTGAAAAAGTTTCGGCTATCGGGCGCGTAAAAAAGG TTTTCGGCGGGCATCATCAGCTCGGTCTTGCTCCTGACATTTTAGAGGAAGCCGGACATGCGGCACGGCACTTGAAGAAA CACGGACTGGCACAGCACGGCACAGGCATGCACCGATTTAAGAGCCTGAGCTTTCAATTTTAA
Upstream 100 bases:
>100_bases TCACCACTCTCACCTATTATGTATTTTATTATTTTGCACATTTGACTGGGAGATATGCATCGATGAGCACCTTTGAAAAA AATGAAGGAGGGACAAACCA
Downstream 100 bases:
>100_bases CTAAAAAAGATGATTGCCTAGCCGGGAACCAACTTTCGCGCTTTCTTCAAAAATGCAGACCTTTCCTGCGGGAATCTGAT CCTTTAGCTCCGAACATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Beta-Lactamase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Zinc-Dependent Hydrolase; Metallo-Beta-Lactamase; Beta-Lactamase DomaiN-Containing Protein; Metallo-Beta-Lactamase Superfamily; Hydroxyacylglutathione Hydrolase; Metallo-Beta-Lactamase Superfamily Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase Glyoxylase; Metallo-Beta-Lactamase Domain Protein
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MADSQWFTVTELDESTYAISEYGHWEKVHSYLLIGAKDAVLIDTGLGIGSMKTVTDGLTDLPVSVITTHVHWDHIGSHDE YQRIYVHEAEREWLTDGIKGLPIEQIRRDVSRDITKPVPAGFSAETYTPFRGEPSGTLQDGDTVGCDSRPLVIYHTPGHS PGHICIFDPASGYLFTGDLLYTGAPIYAFYPTTDPAQLVQSLEKVSAIGRVKKVFGGHHQLGLAPDILEEAGHAARHLKK HGLAQHGTGMHRFKSLSFQF
Sequences:
>Translated_260_residues MADSQWFTVTELDESTYAISEYGHWEKVHSYLLIGAKDAVLIDTGLGIGSMKTVTDGLTDLPVSVITTHVHWDHIGSHDE YQRIYVHEAEREWLTDGIKGLPIEQIRRDVSRDITKPVPAGFSAETYTPFRGEPSGTLQDGDTVGCDSRPLVIYHTPGHS PGHICIFDPASGYLFTGDLLYTGAPIYAFYPTTDPAQLVQSLEKVSAIGRVKKVFGGHHQLGLAPDILEEAGHAARHLKK HGLAQHGTGMHRFKSLSFQF >Mature_259_residues ADSQWFTVTELDESTYAISEYGHWEKVHSYLLIGAKDAVLIDTGLGIGSMKTVTDGLTDLPVSVITTHVHWDHIGSHDEY QRIYVHEAEREWLTDGIKGLPIEQIRRDVSRDITKPVPAGFSAETYTPFRGEPSGTLQDGDTVGCDSRPLVIYHTPGHSP GHICIFDPASGYLFTGDLLYTGAPIYAFYPTTDPAQLVQSLEKVSAIGRVKKVFGGHHQLGLAPDILEEAGHAARHLKKH GLAQHGTGMHRFKSLSFQF
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42822880, Length=256, Percent_Identity=28.125, Blast_Score=103, Evalue=2e-22, Organism=Escherichia coli, GI1787158, Length=190, Percent_Identity=29.4736842105263, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28677; Mature: 28545
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSQWFTVTELDESTYAISEYGHWEKVHSYLLIGAKDAVLIDTGLGIGSMKTVTDGLTD CCCCCEEEEEECCCCEEEHHHCCCHHHHHHEEEECCCCEEEEECCCCCCCHHHHHCCCCC LPVSVITTHVHWDHIGSHDEYQRIYVHEAEREWLTDGIKGLPIEQIRRDVSRDITKPVPA CCHHHEEEEEECCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC GFSAETYTPFRGEPSGTLQDGDTVGCDSRPLVIYHTPGHSPGHICIFDPASGYLFTGDLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEECCEE YTGAPIYAFYPTTDPAQLVQSLEKVSAIGRVKKVFGGHHQLGLAPDILEEAGHAARHLKK ECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH HGLAQHGTGMHRFKSLSFQF CCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure ADSQWFTVTELDESTYAISEYGHWEKVHSYLLIGAKDAVLIDTGLGIGSMKTVTDGLTD CCCCEEEEEECCCCEEEHHHCCCHHHHHHEEEECCCCEEEEECCCCCCCHHHHHCCCCC LPVSVITTHVHWDHIGSHDEYQRIYVHEAEREWLTDGIKGLPIEQIRRDVSRDITKPVPA CCHHHEEEEEECCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC GFSAETYTPFRGEPSGTLQDGDTVGCDSRPLVIYHTPGHSPGHICIFDPASGYLFTGDLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEECCEE YTGAPIYAFYPTTDPAQLVQSLEKVSAIGRVKKVFGGHHQLGLAPDILEEAGHAARHLKK ECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH HGLAQHGTGMHRFKSLSFQF CCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA