Definition | Bacillus licheniformis ATCC 14580, complete genome. |
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Accession | NC_006322 |
Length | 4,222,645 |
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The map label for this gene is yeaO [C]
Identifier: 52784439
GI number: 52784439
Start: 638579
End: 638941
Strand: Reverse
Name: yeaO [C]
Synonym: BLi00636
Alternate gene names: 52784439
Gene position: 638941-638579 (Counterclockwise)
Preceding gene: 52784440
Following gene: 52784438
Centisome position: 15.13
GC content: 44.08
Gene sequence:
>363_bases ATGCCGTTTATTCTCCAGCGCATTTATCAAGAAAACCAGCAAACAGAAGGACGCCGCATTTTAATCGATCGTGTGTGGCC GCGCGGCATATCAAAAGAAAAAGCGAACCCCGACTGCTGGATGAAAGAAATCGCTCCAAGCCCCGAATTAAGAAAATGGT TCGGTCATGATCCGAAAAAATTCGAATCGTTTAAAGAAGCCTATCAAAACGAAATTAAACAAAACGCTGAAAAACAGAAA AGCTTCAGGGAATTAAAAAAAATGGCGGCGGACGAAACCGTTATTCTGCTTTACGGGGCCAAAGATGAGCGCCATAACCA TGCCGTCGTTCTTTATGAGATGCTGAACCGGCAAAGCCTTTGA
Upstream 100 bases:
>100_bases AACATTCCATCGAATAAACGGAATGTTGGCATTGTCTTTTTCAATAGGGTTGTTCCTTCCAGCCTGCCGTTTTATCATAA AATGAGAAGGAGTGATCCGC
Downstream 100 bases:
>100_bases CCTTGAAACTTTTTTCAATCCTTTTCGTATGACAGATAAAGCAATATGAGAAAAGGATGGTAAACGTGGAGATGAACCTG TTTTGGATCGGACTTGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MPFILQRIYQENQQTEGRRILIDRVWPRGISKEKANPDCWMKEIAPSPELRKWFGHDPKKFESFKEAYQNEIKQNAEKQK SFRELKKMAADETVILLYGAKDERHNHAVVLYEMLNRQSL
Sequences:
>Translated_120_residues MPFILQRIYQENQQTEGRRILIDRVWPRGISKEKANPDCWMKEIAPSPELRKWFGHDPKKFESFKEAYQNEIKQNAEKQK SFRELKKMAADETVILLYGAKDERHNHAVVLYEMLNRQSL >Mature_119_residues PFILQRIYQENQQTEGRRILIDRVWPRGISKEKANPDCWMKEIAPSPELRKWFGHDPKKFESFKEAYQNEIKQNAEKQKS FRELKKMAADETVILLYGAKDERHNHAVVLYEMLNRQSL
Specific function: Unknown
COG id: COG3189
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yeaO [H]
Homologues:
Organism=Escherichia coli, GI87081976, Length=115, Percent_Identity=40.8695652173913, Blast_Score=88, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007438 [H]
Pfam domain/function: PF04343 DUF488 [H]
EC number: NA
Molecular weight: Translated: 14378; Mature: 14246
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFILQRIYQENQQTEGRRILIDRVWPRGISKEKANPDCWMKEIAPSPELRKWFGHDPKK CCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCHHH FESFKEAYQNEIKQNAEKQKSFRELKKMAADETVILLYGAKDERHNHAVVLYEMLNRQSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure PFILQRIYQENQQTEGRRILIDRVWPRGISKEKANPDCWMKEIAPSPELRKWFGHDPKK CHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCHHH FESFKEAYQNEIKQNAEKQKSFRELKKMAADETVILLYGAKDERHNHAVVLYEMLNRQSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]