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The map label for this gene is ycxC [H]

Identifier: 52784227

GI number: 52784227

Start: 404908

End: 405819

Strand: Reverse

Name: ycxC [H]

Synonym: BLi00405

Alternate gene names: 52784227

Gene position: 405819-404908 (Counterclockwise)

Preceding gene: 52784229

Following gene: 52784216

Centisome position: 9.61

GC content: 47.48

Gene sequence:

>912_bases
TTGAACAAATCTGCTTATGCGGCAGCTTTGCTCTATGCTTTTATCATTGGATTTTCCTTTTTCTTTGTCAAATTGGCTCT
CACTGCAGCGAGTCCGGTCGACATTCTGGCCCATCGCTTTACGGTCGCTTTTTTGGCTGCGCTTATTCCCCTTCTGCTCG
GATGGGTGAAGATCGCCATCAGCATAAAAGACGCACTGAAAGTGCTGCCTTTAGCATTATTTTACCCTGTCATGTTTTTT
GCTTTTCAAGTTTTCGGGCTCGTCTACACGTCTTCGTCTGAAGCCGGAATCATTCAAGCGGCGATCCCGATTTTCACCAT
GATATTCGCCGCTTATTTTTTAAATGAGCGGTTTACGAAACGGCAATTCTTTTTTACCGTCTTGTCAGCGGCGGGGGTGG
CCTGCATCTTTATGATGAAAAGTGCAGGCACCGGAAGTTCCGATTTAAGAGGGGCGGCGCTGATTTTGCTTTCGGCGCTT
TCATCGGCGGGCTACAGCGTGCTCGCCAGAAAGATGACGCGAACCTTCAGCTCGCTTGAATTAACATATGTCACAACGGG
AGCGGGATTTCTTTTTTTCAACGGCATCGCCGGAATCAGCCATATGTCAGACGGCACGCTGAGCGGATTTTTTGCCCCCT
TCACTGATCCGGTGTTTGTTCTTTCGGTATTGTATTTAGGCGTGTTGTCATCGTTTGCGACATCATTTTTATCAAATTAT
GCACTGTCAAAAATAGAAGCTGCGAAAATCAGCATGTTTAATCACTTGGCGACACTGGTGACGATTTTGGCGGGGATTAT
ATGGCTGGGAGAATCACTCGAATGGTTTCACTTCGCCGGAACGGGGATGATCATTGCCGGAATTATTGGGGCGACGATGG
TTCGGCGGGAAAATCGGCTGAAAAAAAGCTGA

Upstream 100 bases:

>100_bases
TCCGTTTTTTTGTATTGTATCAGATTTCGCTTCCGTATAAGATGACAGAAGCCGGTAAAATATCTGTATTGCATGCATAC
TTTAACGGAGATGATCGACT

Downstream 100 bases:

>100_bases
AAAAACGGAAAATCGGCAGCTGCAGCACACCGATTTTCCGCTTTCTTTACATTGTCGGAACAGCCGTACTGCGGCTGGCC
GCGGCAATCGTTTTCAACTT

Product: YcxC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MNKSAYAAALLYAFIIGFSFFFVKLALTAASPVDILAHRFTVAFLAALIPLLLGWVKIAISIKDALKVLPLALFYPVMFF
AFQVFGLVYTSSSEAGIIQAAIPIFTMIFAAYFLNERFTKRQFFFTVLSAAGVACIFMMKSAGTGSSDLRGAALILLSAL
SSAGYSVLARKMTRTFSSLELTYVTTGAGFLFFNGIAGISHMSDGTLSGFFAPFTDPVFVLSVLYLGVLSSFATSFLSNY
ALSKIEAAKISMFNHLATLVTILAGIIWLGESLEWFHFAGTGMIIAGIIGATMVRRENRLKKS

Sequences:

>Translated_303_residues
MNKSAYAAALLYAFIIGFSFFFVKLALTAASPVDILAHRFTVAFLAALIPLLLGWVKIAISIKDALKVLPLALFYPVMFF
AFQVFGLVYTSSSEAGIIQAAIPIFTMIFAAYFLNERFTKRQFFFTVLSAAGVACIFMMKSAGTGSSDLRGAALILLSAL
SSAGYSVLARKMTRTFSSLELTYVTTGAGFLFFNGIAGISHMSDGTLSGFFAPFTDPVFVLSVLYLGVLSSFATSFLSNY
ALSKIEAAKISMFNHLATLVTILAGIIWLGESLEWFHFAGTGMIIAGIIGATMVRRENRLKKS
>Mature_303_residues
MNKSAYAAALLYAFIIGFSFFFVKLALTAASPVDILAHRFTVAFLAALIPLLLGWVKIAISIKDALKVLPLALFYPVMFF
AFQVFGLVYTSSSEAGIIQAAIPIFTMIFAAYFLNERFTKRQFFFTVLSAAGVACIFMMKSAGTGSSDLRGAALILLSAL
SSAGYSVLARKMTRTFSSLELTYVTTGAGFLFFNGIAGISHMSDGTLSGFFAPFTDPVFVLSVLYLGVLSSFATSFLSNY
ALSKIEAAKISMFNHLATLVTILAGIIWLGESLEWFHFAGTGMIIAGIIGATMVRRENRLKKS

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32751; Mature: 32751

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSAYAAALLYAFIIGFSFFFVKLALTAASPVDILAHRFTVAFLAALIPLLLGWVKIAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIKDALKVLPLALFYPVMFFAFQVFGLVYTSSSEAGIIQAAIPIFTMIFAAYFLNERFTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RQFFFTVLSAAGVACIFMMKSAGTGSSDLRGAALILLSALSSAGYSVLARKMTRTFSSLE
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEE
LTYVTTGAGFLFFNGIAGISHMSDGTLSGFFAPFTDPVFVLSVLYLGVLSSFATSFLSNY
EEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALSKIEAAKISMFNHLATLVTILAGIIWLGESLEWFHFAGTGMIIAGIIGATMVRRENRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCHHHHHHHHHHHHHHHHHHC
KKS
CCC
>Mature Secondary Structure
MNKSAYAAALLYAFIIGFSFFFVKLALTAASPVDILAHRFTVAFLAALIPLLLGWVKIAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIKDALKVLPLALFYPVMFFAFQVFGLVYTSSSEAGIIQAAIPIFTMIFAAYFLNERFTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RQFFFTVLSAAGVACIFMMKSAGTGSSDLRGAALILLSALSSAGYSVLARKMTRTFSSLE
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEE
LTYVTTGAGFLFFNGIAGISHMSDGTLSGFFAPFTDPVFVLSVLYLGVLSSFATSFLSNY
EEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALSKIEAAKISMFNHLATLVTILAGIIWLGESLEWFHFAGTGMIIAGIIGATMVRRENRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCHHHHHHHHHHHHHHHHHHC
KKS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8355609; 8969502; 9384377 [H]