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The map label for this gene is bioC [C]

Identifier: 52784067

GI number: 52784067

Start: 219333

End: 220106

Strand: Reverse

Name: bioC [C]

Synonym: BLi00242

Alternate gene names: 52784067

Gene position: 220106-219333 (Counterclockwise)

Preceding gene: 52784069

Following gene: 52784059

Centisome position: 5.21

GC content: 44.32

Gene sequence:

>774_bases
ATGAGAAAAAACGCTGCCACTGAAGAAGCCATTCAAAGATGGAACCGGTTTGCAGATAGCTATGCTGCAAACCATACTGA
ACAAGGCGATATACATAAAGAAGTCTTTTTGAACCCCGTCATCTTTTCTCTCATTGAAACGGTGAAAAATCAAAAAGTGC
TGGATGCCGGGTGCGGAGAAGGATATTTAAGCAGAATGCTGGCCGCCCGCGAAGCAGTTGTAACGGCGGTTGACTATTCG
ACAAGAATGCTTGAGATCGCCAAGGAAAGAACGCCGGACGGATTGCACATTCATTATCGGCACGGCAATTGTGAGGACTT
GCATTTTTTAGATGAGCAAAGCTTTGATATCATCATATCGAATATGGTCATCCAAGACCTCGCAAATGATGAAAAAGCGT
TTCAGGAAATGCACAGGTTATTAAAAGATGGAGGATGCTTTATTTTTTCAATATTACACCCTTGTTTCGTCACCCCGGAA
AGCGGATGGGAAAGAACCAAAGACGGCCAAAAGCTCCATTGGAACGTTGATCGGTATTTTTACGAAGGCGCATATGAGCA
GCCGCTGGGCGGCGAGGAGAAAATGTTTCTTTTTCACAGAACACTGACAAGCTATATCAATACGATCATCAAAGCCGGCT
TTCAATTAGAAGCGGTCGAGGAACCGAGACCGTCAAAAGAGATGCTGAAAAAATACCCTTCATTTGAAGAAGATCTCAGG
TGCCCCGATTTCATCGTTTTTAAATTAAGAAAGCCCGGCGGCGATGTCCGATAG

Upstream 100 bases:

>100_bases
CATAATTACAAATAGGCTGCTTTGTCAACAGGAATGTCCTTTAACCTGGCTAAAACGTAATATGGTTTGTGGTATGATCA
TGTCAAAAGGAGGAAGTGAT

Downstream 100 bases:

>100_bases
GCCCCGAATCCGATAGACCTTTTCCTACCCTTTTTGAGTATTTGTTTTTCTTCGCGGCCAAATGACGGCTGGAATCAGAG
CCAAGGATAACAGCCCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MRKNAATEEAIQRWNRFADSYAANHTEQGDIHKEVFLNPVIFSLIETVKNQKVLDAGCGEGYLSRMLAAREAVVTAVDYS
TRMLEIAKERTPDGLHIHYRHGNCEDLHFLDEQSFDIIISNMVIQDLANDEKAFQEMHRLLKDGGCFIFSILHPCFVTPE
SGWERTKDGQKLHWNVDRYFYEGAYEQPLGGEEKMFLFHRTLTSYINTIIKAGFQLEAVEEPRPSKEMLKKYPSFEEDLR
CPDFIVFKLRKPGGDVR

Sequences:

>Translated_257_residues
MRKNAATEEAIQRWNRFADSYAANHTEQGDIHKEVFLNPVIFSLIETVKNQKVLDAGCGEGYLSRMLAAREAVVTAVDYS
TRMLEIAKERTPDGLHIHYRHGNCEDLHFLDEQSFDIIISNMVIQDLANDEKAFQEMHRLLKDGGCFIFSILHPCFVTPE
SGWERTKDGQKLHWNVDRYFYEGAYEQPLGGEEKMFLFHRTLTSYINTIIKAGFQLEAVEEPRPSKEMLKKYPSFEEDLR
CPDFIVFKLRKPGGDVR
>Mature_257_residues
MRKNAATEEAIQRWNRFADSYAANHTEQGDIHKEVFLNPVIFSLIETVKNQKVLDAGCGEGYLSRMLAAREAVVTAVDYS
TRMLEIAKERTPDGLHIHYRHGNCEDLHFLDEQSFDIIISNMVIQDLANDEKAFQEMHRLLKDGGCFIFSILHPCFVTPE
SGWERTKDGQKLHWNVDRYFYEGAYEQPLGGEEKMFLFHRTLTSYINTIIKAGFQLEAVEEPRPSKEMLKKYPSFEEDLR
CPDFIVFKLRKPGGDVR

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786994, Length=113, Percent_Identity=34.5132743362832, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 29757; Mature: 29757

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKNAATEEAIQRWNRFADSYAANHTEQGDIHKEVFLNPVIFSLIETVKNQKVLDAGCGE
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEHHCCCCH
GYLSRMLAAREAVVTAVDYSTRMLEIAKERTPDGLHIHYRHGNCEDLHFLDEQSFDIIIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHCCCCCHHHHHH
NMVIQDLANDEKAFQEMHRLLKDGGCFIFSILHPCFVTPESGWERTKDGQKLHWNVDRYF
HHHHHHHCCHHHHHHHHHHHHHCCCEEHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHH
YEGAYEQPLGGEEKMFLFHRTLTSYINTIIKAGFQLEAVEEPRPSKEMLKKYPSFEEDLR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCHHHCC
CPDFIVFKLRKPGGDVR
CCCEEEEEEECCCCCCC
>Mature Secondary Structure
MRKNAATEEAIQRWNRFADSYAANHTEQGDIHKEVFLNPVIFSLIETVKNQKVLDAGCGE
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEHHCCCCH
GYLSRMLAAREAVVTAVDYSTRMLEIAKERTPDGLHIHYRHGNCEDLHFLDEQSFDIIIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHCCCCCHHHHHH
NMVIQDLANDEKAFQEMHRLLKDGGCFIFSILHPCFVTPESGWERTKDGQKLHWNVDRYF
HHHHHHHCCHHHHHHHHHHHHHCCCEEHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHH
YEGAYEQPLGGEEKMFLFHRTLTSYINTIIKAGFQLEAVEEPRPSKEMLKKYPSFEEDLR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCHHHCC
CPDFIVFKLRKPGGDVR
CCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]