Click here to switch to the map view.

The map label for this gene is nusG [H]

Identifier: 52783957

GI number: 52783957

Start: 116653

End: 117186

Strand: Direct

Name: nusG [H]

Synonym: BLi00119

Alternate gene names: 52783957

Gene position: 116653-117186 (Clockwise)

Preceding gene: 52783956

Following gene: 52783958

Centisome position: 2.76

GC content: 43.07

Gene sequence:

>534_bases
ATGGAAAAGAAATGGTATGTGGTTCATACGTACTCCGGCTATGAAAATAAAGTAAAGGCGAATTTGGAAAAGCGGGTAGA
ATCGATGGGGATGCAAGATAAGATATTCCGCGTCGTTGTACCTGAAGAGGAAGAAACCGATATTAAAAACGGCAAGAAAA
AAGTCGTTAAAAAGAAAGTCTTCCCTGGTTATGTACTTGTCGAACTTGTCATGACGGATGATTCCTGGTATGTTGTTCGA
AATACGCCTGGTGTGACCGGGTTTGTCGGTTCAGCCGGATCAGGTTCAAAGCCGACTGCACTGCTTCCGGGCGAAGCGGA
AAAAATCCTGAAGCGGATGGGGCTTGAAGAAAGAAAAACAGAAATCGACTTTGAATTAAAAGAAACCGTCAAGGTTATCG
ACGGCCCGTTTGCTGATTTCACAGGGACGATCGAAGAGATCGACCACGACAAAAATAAAGTCAAAGTTTTTGTTAATATG
TTCGGAAGAGAGACCCCGGTTGAGCTCGAATTTACTCAAGTTGACAAATTGTAA

Upstream 100 bases:

>100_bases
AAAATATGAGGCTCGTATAAAAGAAAGTGTCAGTTTCCCGGTACGGCCAATAAACTTTTAAGGTGTGGGGAGGGAAGGAC
TGAAAGGGTCCTGAATGAGA

Downstream 100 bases:

>100_bases
TGGAAAAGCGCTTGAAATCACTATATAAAAGTGGTAATATACAAAGGTGCGTCTTGGCAAAAAGGTCAAGGCAGCTAGCT
TGATATTTTCATCATTCATA

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MEKKWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEEETDIKNGKKKVVKKKVFPGYVLVELVMTDDSWYVVR
NTPGVTGFVGSAGSGSKPTALLPGEAEKILKRMGLEERKTEIDFELKETVKVIDGPFADFTGTIEEIDHDKNKVKVFVNM
FGRETPVELEFTQVDKL

Sequences:

>Translated_177_residues
MEKKWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEEETDIKNGKKKVVKKKVFPGYVLVELVMTDDSWYVVR
NTPGVTGFVGSAGSGSKPTALLPGEAEKILKRMGLEERKTEIDFELKETVKVIDGPFADFTGTIEEIDHDKNKVKVFVNM
FGRETPVELEFTQVDKL
>Mature_177_residues
MEKKWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEEETDIKNGKKKVVKKKVFPGYVLVELVMTDDSWYVVR
NTPGVTGFVGSAGSGSKPTALLPGEAEKILKRMGLEERKTEIDFELKETVKVIDGPFADFTGTIEEIDHDKNKVKVFVNM
FGRETPVELEFTQVDKL

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=176, Percent_Identity=43.1818181818182, Blast_Score=160, Evalue=6e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20153; Mature: 20153

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEEETDIKNGKKKVVKKKV
CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCHHHHHHHHHC
FPGYVLVELVMTDDSWYVVRNTPGVTGFVGSAGSGSKPTALLPGEAEKILKRMGLEERKT
CCCEEEEEEEEECCCEEEEECCCCCEEECCCCCCCCCCCEECCCCHHHHHHHCCCCHHHH
EIDFELKETVKVIDGPFADFTGTIEEIDHDKNKVKVFVNMFGRETPVELEFTQVDKL
CCCEEHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCCC
>Mature Secondary Structure
MEKKWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEEETDIKNGKKKVVKKKV
CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCHHHHHHHHHC
FPGYVLVELVMTDDSWYVVRNTPGVTGFVGSAGSGSKPTALLPGEAEKILKRMGLEERKT
CCCEEEEEEEEECCCEEEEECCCCCEEECCCCCCCCCCCEECCCCHHHHHHHCCCCHHHH
EIDFELKETVKVIDGPFADFTGTIEEIDHDKNKVKVFVNMFGRETPVELEFTQVDKL
CCCEEHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7968510; 9384377 [H]