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The map label for this gene is yuxN [H]

Identifier: 52145242

GI number: 52145242

Start: 5242311

End: 5243183

Strand: Reverse

Name: yuxN [H]

Synonym: BCZK5130

Alternate gene names: 52145242

Gene position: 5243183-5242311 (Counterclockwise)

Preceding gene: 52145244

Following gene: 52145240

Centisome position: 98.91

GC content: 32.07

Gene sequence:

>873_bases
ATGAAAGAAAAAGAGCGCTTAATTATAGAGATGGCTATGAAGTTATTTGCGACTAAGGGTGTAAATGCGACATCAGTGCA
GGAAATTGTGACAGCTTGTGGCATATCTAAGGGAGCCTTTTATTTATACTTTAAATCGAAAGAGGAACTTTTATTAGCAA
CACTTCGATATTACTATGACAAGATTCAAAACAAAATGATGGATATTGAAAAAGAGTCGTTATTGCCACGTGAAAAATTT
GCAAAACAACTGCATTGCCAATTTAATGATATACAAAAGCATAAAGAATTCATTATTATGCATGCCAGAGAAAATGCTAT
TCCGTTTAATAAAGAAGTAGAAGAATTTATGATGCGGATGAAGTTAGAGTCTCACGCATTTTATCGAAATAGTTTATTGT
CTATTTATGGTGATAAGGTTATGCCATATTTATTAGATTTAGTCATTATGGTAGAAGGCATATGCCGTGGATATTTAGAA
CTAATTATTTTACAAGCGCCAGAAATCGACTTATCTTACGTCTCTACGTTTATTTTGAAAAGAGTAGACGATTTAGTAGA
TGGATTGTTAAAATCTTCGGAAGAACCTGTGTTACATGAAGAAAAGCTTGGAGAATTTCTTTGTAAATCAGAGCTTATTA
AGGAGCAGGTTAAGGAACATTTTTTAAAAGAAATTATTGTGTTTAAACGTACATTAGCGGATCAATTAGAAGATGAGGAA
TTGCTTGTTACGTTAGATGTTTTAGAGGCAGAAATGAGATTACCAAATCCAAGGATTCCGGTTATACAAGGAATGCTGTC
TAATTTAGAAGTATATCCAAATTTAAAAGAATTTCGTTTGAGACTTATGGGCTATTACAATATAAAAAGGTAA

Upstream 100 bases:

>100_bases
CTAATACATAATATAACTGACTGATTGGTCAGCCGTCAATGAAAAGGGATGGTATAATGAATTCATAATAAGATGCGAGA
TTAAATTTAGGAGAGACGAT

Downstream 100 bases:

>100_bases
CAATGATAGTTTTCATTGTTACCTTTTTTATTATGCATTCACTTTTTCTTTTTTCAGTGCAGTCTCTTCTTGGTCAATGT
TGATTGTTTCTTTTACGATA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MKEKERLIIEMAMKLFATKGVNATSVQEIVTACGISKGAFYLYFKSKEELLLATLRYYYDKIQNKMMDIEKESLLPREKF
AKQLHCQFNDIQKHKEFIIMHARENAIPFNKEVEEFMMRMKLESHAFYRNSLLSIYGDKVMPYLLDLVIMVEGICRGYLE
LIILQAPEIDLSYVSTFILKRVDDLVDGLLKSSEEPVLHEEKLGEFLCKSELIKEQVKEHFLKEIIVFKRTLADQLEDEE
LLVTLDVLEAEMRLPNPRIPVIQGMLSNLEVYPNLKEFRLRLMGYYNIKR

Sequences:

>Translated_290_residues
MKEKERLIIEMAMKLFATKGVNATSVQEIVTACGISKGAFYLYFKSKEELLLATLRYYYDKIQNKMMDIEKESLLPREKF
AKQLHCQFNDIQKHKEFIIMHARENAIPFNKEVEEFMMRMKLESHAFYRNSLLSIYGDKVMPYLLDLVIMVEGICRGYLE
LIILQAPEIDLSYVSTFILKRVDDLVDGLLKSSEEPVLHEEKLGEFLCKSELIKEQVKEHFLKEIIVFKRTLADQLEDEE
LLVTLDVLEAEMRLPNPRIPVIQGMLSNLEVYPNLKEFRLRLMGYYNIKR
>Mature_290_residues
MKEKERLIIEMAMKLFATKGVNATSVQEIVTACGISKGAFYLYFKSKEELLLATLRYYYDKIQNKMMDIEKESLLPREKF
AKQLHCQFNDIQKHKEFIIMHARENAIPFNKEVEEFMMRMKLESHAFYRNSLLSIYGDKVMPYLLDLVIMVEGICRGYLE
LIILQAPEIDLSYVSTFILKRVDDLVDGLLKSSEEPVLHEEKLGEFLCKSELIKEQVKEHFLKEIIVFKRTLADQLEDEE
LLVTLDVLEAEMRLPNPRIPVIQGMLSNLEVYPNLKEFRLRLMGYYNIKR

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 34121; Mature: 34121

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKERLIIEMAMKLFATKGVNATSVQEIVTACGISKGAFYLYFKSKEELLLATLRYYYD
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
KIQNKMMDIEKESLLPREKFAKQLHCQFNDIQKHKEFIIMHARENAIPFNKEVEEFMMRM
HHHHHHHCCHHHHCCCHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHH
KLESHAFYRNSLLSIYGDKVMPYLLDLVIMVEGICRGYLELIILQAPEIDLSYVSTFILK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RVDDLVDGLLKSSEEPVLHEEKLGEFLCKSELIKEQVKEHFLKEIIVFKRTLADQLEDEE
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LLVTLDVLEAEMRLPNPRIPVIQGMLSNLEVYPNLKEFRLRLMGYYNIKR
HEEHHHHHHHHHCCCCCCCHHHHHHHHCCHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKEKERLIIEMAMKLFATKGVNATSVQEIVTACGISKGAFYLYFKSKEELLLATLRYYYD
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
KIQNKMMDIEKESLLPREKFAKQLHCQFNDIQKHKEFIIMHARENAIPFNKEVEEFMMRM
HHHHHHHCCHHHHCCCHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHH
KLESHAFYRNSLLSIYGDKVMPYLLDLVIMVEGICRGYLELIILQAPEIDLSYVSTFILK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RVDDLVDGLLKSSEEPVLHEEKLGEFLCKSELIKEQVKEHFLKEIIVFKRTLADQLEDEE
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LLVTLDVLEAEMRLPNPRIPVIQGMLSNLEVYPNLKEFRLRLMGYYNIKR
HEEHHHHHHHHHCCCCCCCHHHHHHHHCCHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9353931; 9384377; 3923430 [H]