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The map label for this gene is ydfC [H]

Identifier: 52142819

GI number: 52142819

Start: 2559340

End: 2560254

Strand: Direct

Name: ydfC [H]

Synonym: BCZK2420

Alternate gene names: 52142819

Gene position: 2559340-2560254 (Clockwise)

Preceding gene: 52142821

Following gene: 52142820

Centisome position: 48.28

GC content: 33.55

Gene sequence:

>915_bases
ATGCATAATAAAAAATGGGATTTACGCATTATATGTGCTCACGCTTTTACGATTCTTATATGGGGATCTGCTTTTCCAGC
AATCCGTATGGGGCTTGAATCTTATACGCCTGAGCATCTGACTTTACTACGTTTATTAATTGCTTCAGTTATACTTCTTT
TGTTTTCCTTTATATATAAGTTACGGCTACCGGATTTAAAGGATATCCCAGCCATTTTTATATTTGGTGCTTTAGGATTT
ACTTTTTATCACATTGCACTAAACTATGGTGAAAAAACAGTAAATGCTGGATCTGCAAGTTTAATTGTTTCAGTCACGCC
TATAGTAACGGCAATATTCGCTTCTGTTTTTATGAATGAAAAAATGAAATTAAATGGTTGGATCGGTGGTGTAATTAGTT
TTATAGGAATTGCTTTCATATCATTTAGTCAAGGAGATGCTATTCAACTAAATAGTGGGGCATTATTTATATTATTAGCA
GCGATTTCAGAAAGCTTATTTTTCGTTTTCCAATCTTCTTACTTAAAAAAGTACGGTTTCTTGCCATTTACCATATATAC
AATTTTATCTAGTACGGTATGTATGCTTATTTTCTTACCAGGAATGTATCAAGAAATACTAGCAGCTCCTCTTGAAGTTA
ACTTGAGCGTTATATATTTAGGTGTCTTTCCAACAGTACTCCCATATATTGCATTGGCCTATATTATATCTCGTGCTGGT
GCTTCTGAAGCAACAAGTTCTCTATATTTAACGCCAATAACTGCATGTTTTGTCGCTTGGATATGGTTAGGAGAAGTGCC
AACTTTAGTTTCGATAATTGGCGGAGGGATTACTATACTTGGAATTGTGATTGCTCATATACCAGTATTAAGAAAAGAAA
AACATAACAATTTAGCAAATAATCAATCCGTATAA

Upstream 100 bases:

>100_bases
TAAAAAACTGGTTGAAGACATTGTATCAACTATTAAATATGATGAAAAGAAATAATTGGTAATTTGAAAATGGTTGGTTT
ATTAGGGAGGGAGAAACAAC

Downstream 100 bases:

>100_bases
TGTAATTAAATAATGATTTTATGATACTTTTTTATATAGTTTCTTTCTTATGTTGATAAATATAATATTTTGTATTTCAG
TTAAATATTGTATGTTACAT

Product: drug/metabolite exporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MHNKKWDLRIICAHAFTILIWGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYKLRLPDLKDIPAIFIFGALGF
TFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNEKMKLNGWIGGVISFIGIAFISFSQGDAIQLNSGALFILLA
AISESLFFVFQSSYLKKYGFLPFTIYTILSSTVCMLIFLPGMYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAG
ASEATSSLYLTPITACFVAWIWLGEVPTLVSIIGGGITILGIVIAHIPVLRKEKHNNLANNQSV

Sequences:

>Translated_304_residues
MHNKKWDLRIICAHAFTILIWGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYKLRLPDLKDIPAIFIFGALGF
TFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNEKMKLNGWIGGVISFIGIAFISFSQGDAIQLNSGALFILLA
AISESLFFVFQSSYLKKYGFLPFTIYTILSSTVCMLIFLPGMYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAG
ASEATSSLYLTPITACFVAWIWLGEVPTLVSIIGGGITILGIVIAHIPVLRKEKHNNLANNQSV
>Mature_304_residues
MHNKKWDLRIICAHAFTILIWGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYKLRLPDLKDIPAIFIFGALGF
TFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNEKMKLNGWIGGVISFIGIAFISFSQGDAIQLNSGALFILLA
AISESLFFVFQSSYLKKYGFLPFTIYTILSSTVCMLIFLPGMYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAG
ASEATSSLYLTPITACFVAWIWLGEVPTLVSIIGGGITILGIVIAHIPVLRKEKHNNLANNQSV

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33354; Mature: 33354

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNKKWDLRIICAHAFTILIWGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYK
CCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LRLPDLKDIPAIFIFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNE
HCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEHHHHHHHHHHHHHHCC
KMKLNGWIGGVISFIGIAFISFSQGDAIQLNSGALFILLAAISESLFFVFQSSYLKKYGF
CEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPFTIYTILSSTVCMLIFLPGMYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCC
ASEATSSLYLTPITACFVAWIWLGEVPTLVSIIGGGITILGIVIAHIPVLRKEKHNNLAN
CCHHHCCEEHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
NQSV
CCCC
>Mature Secondary Structure
MHNKKWDLRIICAHAFTILIWGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYK
CCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LRLPDLKDIPAIFIFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNE
HCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEHHHHHHHHHHHHHHCC
KMKLNGWIGGVISFIGIAFISFSQGDAIQLNSGALFILLAAISESLFFVFQSSYLKKYGF
CEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPFTIYTILSSTVCMLIFLPGMYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCC
ASEATSSLYLTPITACFVAWIWLGEVPTLVSIIGGGITILGIVIAHIPVLRKEKHNNLAN
CCHHHCCEEHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
NQSV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]