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The map label for this gene is pgd [H]

Identifier: 52142581

GI number: 52142581

Start: 2768799

End: 2769626

Strand: Direct

Name: pgd [H]

Synonym: BCZK2661

Alternate gene names: 52142581

Gene position: 2768799-2769626 (Clockwise)

Preceding gene: 52142604

Following gene: 52142577

Centisome position: 52.23

GC content: 38.29

Gene sequence:

>828_bases
ATGCACAATGGAATTCGAATGACAACTTTAGTGAAAAGGGCTATGTTGATTTGCGCGGGGGTATTGTTTACATACGAAGC
GGCTTTAGGATCAACACATACTGCTCTAGCAAGTACAGAGGATGAAGCAAAATCTGTTCAACTTGTAAGTGAAATTCAAT
CGTCTCTTGCACCGAAAGAAGCTCCAAAACAATACAATGGGCAAGTTAGAAAAGTAGCTTATTTAACATTTGATGATGGT
CCTGGAAAATACACAGCTGAGCTTTTAGATATGTTAAAGAAAGAAAATGCAAAAGCAACATTCTTCCTTATTGGTTCAAA
TGTAAAAGCTTTTCCTGATCTTGTAAAGCGTGAAGATGCTGAAGGCCACTACGTTGGGATGCACAGTATGACTCATAACT
ACAAGAAACTTTACACAGAGGGTCATTACGTAGATGAGATGAAAGAAGATCAAGGATTAATCGCTGGCGTTCTAGGTAAA
TCGCCAGTATTAACTCGTCCATCTTATGGCTCAATGCCAGGGTTAAACGAAGCGCTTCGTAACAAAGTTGTTGAGAATGG
GCTAAAAGTTTGGGATTGGACAATTGATTCATTAGACTGGAGATATAACAAAATGCCTGTTGACGCTGCATCAGCTAAAA
TTGTAGAAAACGTTATTAATGGTGCAAACAAACCAACAGAAGTTATCCTTATGCACGACATTCATCCACAATCCGTAAAA
GCAGTACCTGGTATTATTAAAGGTCTGAAGGAAAAAGGATATGAATTAGAAGCCTATAGTGAGAACGAACACTTCCCATT
AAACTTCTGGCATGATAATCGTATGTAA

Upstream 100 bases:

>100_bases
TGGACAAACTTTTTTGCACTTGTAAAAAAGTTTTTTTGCAATTACCTCCCTATAATTGCTAATATAGTAGAGTAGAACTT
TTATAGAGAGAAGGAAAATT

Downstream 100 bases:

>100_bases
TGAAAAAGACTTGATTCCCTTTAGGATATCAAGTCTTTTTATCTTATCTATTAAAAAATATATCCTACTAACTTCACAAT
TTCACTAATTAAAATACCTA

Product: peptidoglycan N-acetylglucosamine deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MHNGIRMTTLVKRAMLICAGVLFTYEAALGSTHTALASTEDEAKSVQLVSEIQSSLAPKEAPKQYNGQVRKVAYLTFDDG
PGKYTAELLDMLKKENAKATFFLIGSNVKAFPDLVKREDAEGHYVGMHSMTHNYKKLYTEGHYVDEMKEDQGLIAGVLGK
SPVLTRPSYGSMPGLNEALRNKVVENGLKVWDWTIDSLDWRYNKMPVDAASAKIVENVINGANKPTEVILMHDIHPQSVK
AVPGIIKGLKEKGYELEAYSENEHFPLNFWHDNRM

Sequences:

>Translated_275_residues
MHNGIRMTTLVKRAMLICAGVLFTYEAALGSTHTALASTEDEAKSVQLVSEIQSSLAPKEAPKQYNGQVRKVAYLTFDDG
PGKYTAELLDMLKKENAKATFFLIGSNVKAFPDLVKREDAEGHYVGMHSMTHNYKKLYTEGHYVDEMKEDQGLIAGVLGK
SPVLTRPSYGSMPGLNEALRNKVVENGLKVWDWTIDSLDWRYNKMPVDAASAKIVENVINGANKPTEVILMHDIHPQSVK
AVPGIIKGLKEKGYELEAYSENEHFPLNFWHDNRM
>Mature_275_residues
MHNGIRMTTLVKRAMLICAGVLFTYEAALGSTHTALASTEDEAKSVQLVSEIQSSLAPKEAPKQYNGQVRKVAYLTFDDG
PGKYTAELLDMLKKENAKATFFLIGSNVKAFPDLVKREDAEGHYVGMHSMTHNYKKLYTEGHYVDEMKEDQGLIAGVLGK
SPVLTRPSYGSMPGLNEALRNKVVENGLKVWDWTIDSLDWRYNKMPVDAASAKIVENVINGANKPTEVILMHDIHPQSVK
AVPGIIKGLKEKGYELEAYSENEHFPLNFWHDNRM

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=158, Percent_Identity=31.6455696202532, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6323338, Length=158, Percent_Identity=27.8481012658228, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 30729; Mature: 30729

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNGIRMTTLVKRAMLICAGVLFTYEAALGSTHTALASTEDEAKSVQLVSEIQSSLAPKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCC
APKQYNGQVRKVAYLTFDDGPGKYTAELLDMLKKENAKATFFLIGSNVKAFPDLVKREDA
CCHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCC
EGHYVGMHSMTHNYKKLYTEGHYVDEMKEDQGLIAGVLGKSPVLTRPSYGSMPGLNEALR
CCCEEEHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCCCEECCCCCCCCCHHHHHH
NKVVENGLKVWDWTIDSLDWRYNKMPVDAASAKIVENVINGANKPTEVILMHDIHPQSVK
HHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH
AVPGIIKGLKEKGYELEAYSENEHFPLNFWHDNRM
HHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCCC
>Mature Secondary Structure
MHNGIRMTTLVKRAMLICAGVLFTYEAALGSTHTALASTEDEAKSVQLVSEIQSSLAPKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCC
APKQYNGQVRKVAYLTFDDGPGKYTAELLDMLKKENAKATFFLIGSNVKAFPDLVKREDA
CCHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCC
EGHYVGMHSMTHNYKKLYTEGHYVDEMKEDQGLIAGVLGKSPVLTRPSYGSMPGLNEALR
CCCEEEHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCCCEECCCCCCCCCHHHHHH
NKVVENGLKVWDWTIDSLDWRYNKMPVDAASAKIVENVINGANKPTEVILMHDIHPQSVK
HHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH
AVPGIIKGLKEKGYELEAYSENEHFPLNFWHDNRM
HHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]