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The map label for this gene is rocC [H]

Identifier: 52142526

GI number: 52142526

Start: 2834536

End: 2835960

Strand: Direct

Name: rocC [H]

Synonym: BCZK2716

Alternate gene names: 52142526

Gene position: 2834536-2835960 (Clockwise)

Preceding gene: 52142529

Following gene: 52142521

Centisome position: 53.47

GC content: 37.33

Gene sequence:

>1425_bases
ATGGCGCAAGTAAATAATACAAACAATGAATTAAAACGTACGATGAAAAGTAGACACTTATTCATGATTGCACTTGGTGG
TGTGATTGGAACGGGGTTATTTAACGGATCTGGTTTTATTATAAGTCAGGCTGGACCTGGTGGATCCGTACTTGCCTTTA
TGGCCGGTGGATTATTAATGTATTTCGTTATGCTATGTCTTGGTGAACTCGCTGTAGCCATGCCCGTTTCGGGGTCTTTC
CAGGAATATGCCACTAAGTTTATCAATCCTGCAACTGGCTTTACAATCGGATGGTTGTATTGGTTAAGCTGGGCGAATAC
GACCGGCCTTGAATTTACAACTGCCGGCATTACAATGCAGCGCTGGTTTCCTGATATTCCTGTTTGGGTTTGGTGTTTAA
TATTTGGCGTTACAATCTTCACAATTAACGCACTATCTGCTCGTAGTTATGCAGAAACAGAATTTTGGTTTTCAAGTATA
AAAGTATCTGCCATTATCGCTTTTATTATTCTTGGCGGCGCCGCTATGTTCGGTTTAATTGATTTAAAAGGCGACGAACC
AGCTCCGCTATTTTCAAATTTCGTAAATCATGGTGGTTTATTCCCAAATGGACTTGCAGCTATTCTATTAACAATGGTTA
CAGTCAATTATTCCTTCCAAGGTACAGAACTTGTCGGAATCGCAGCAGGTGAAAGTGAAGATCCAGCAAAAACTTTACCT
CGTTCTATTAGAAATATTATATGGCGCACGATGTTTTTCTTCGTCTTAGCAATCTTTGTTCTTGTTGCTTTAATTCCTTG
GGAAGAAGCAGGATTAACAAAAAGCCCGTTCGTTGCTGTTTTTGATAATATCGGTATTCCATATGCAGCTGATATTATGA
ACTTTGTTATTCTTACAGCTGTTCTTTCTGTCGCAAACTCAGGACTTTACGCGGCAACTCGTATGCTTTGGTCATTATCA
AAAAATGAAATGGCTCCAGCCTTTTTAAAGAAATTATCATCACGAGGAATACCTCTAAACGCTTTAATTATGACAATTGC
TATTTCTGCTTTTTCTCTTTTAACAAGCGTTGTAGCAGCTGAAACTGTTTACTTATGGTTAATTTCTATTTCGGGCGTCA
TAACAATCATTGTTTGGATGTCAATTTGTGTTTCTCAATTCTTTTTCCGTAAACATTATGTAGCAGACGGTGGAAAGTTA
GAAGACTTAAAATTTAAAACGCCACTTTATCCACTTGTACCCATGCTTGGTTTTGGATTGTATGGCATTATTTTAATCAG
TCTTATTTTTATCCCAGAACAACGACTTGGAATCTATTGCACTGTACCATTTATTATCTTTTGCTACACTTACTATCACT
TTAAAGTGAAGAAAAGAATTTCTACTAACACTTCTAGTGAAAATAAAATTAGCGAGACTATATAA

Upstream 100 bases:

>100_bases
TTATCTGAAAATTATAACAAGATTTCACATCACGGAATACATTCCATAATACGGAAAAACATCAAACTTTATTCTATCAA
CTACGAAAGTGAGGAAAACA

Downstream 100 bases:

>100_bases
TACTCTGTTTATATAAAAGACCGCACATGGCTTTTACTTCATGTGCGGTCTTTTATCCTTCTAATTCGCTTTAAAATTAT
ACAACGGCTTAATAATGTGT

Product: amino acid permease; arginine permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MAQVNNTNNELKRTMKSRHLFMIALGGVIGTGLFNGSGFIISQAGPGGSVLAFMAGGLLMYFVMLCLGELAVAMPVSGSF
QEYATKFINPATGFTIGWLYWLSWANTTGLEFTTAGITMQRWFPDIPVWVWCLIFGVTIFTINALSARSYAETEFWFSSI
KVSAIIAFIILGGAAMFGLIDLKGDEPAPLFSNFVNHGGLFPNGLAAILLTMVTVNYSFQGTELVGIAAGESEDPAKTLP
RSIRNIIWRTMFFFVLAIFVLVALIPWEEAGLTKSPFVAVFDNIGIPYAADIMNFVILTAVLSVANSGLYAATRMLWSLS
KNEMAPAFLKKLSSRGIPLNALIMTIAISAFSLLTSVVAAETVYLWLISISGVITIIVWMSICVSQFFFRKHYVADGGKL
EDLKFKTPLYPLVPMLGFGLYGIILISLIFIPEQRLGIYCTVPFIIFCYTYYHFKVKKRISTNTSSENKISETI

Sequences:

>Translated_474_residues
MAQVNNTNNELKRTMKSRHLFMIALGGVIGTGLFNGSGFIISQAGPGGSVLAFMAGGLLMYFVMLCLGELAVAMPVSGSF
QEYATKFINPATGFTIGWLYWLSWANTTGLEFTTAGITMQRWFPDIPVWVWCLIFGVTIFTINALSARSYAETEFWFSSI
KVSAIIAFIILGGAAMFGLIDLKGDEPAPLFSNFVNHGGLFPNGLAAILLTMVTVNYSFQGTELVGIAAGESEDPAKTLP
RSIRNIIWRTMFFFVLAIFVLVALIPWEEAGLTKSPFVAVFDNIGIPYAADIMNFVILTAVLSVANSGLYAATRMLWSLS
KNEMAPAFLKKLSSRGIPLNALIMTIAISAFSLLTSVVAAETVYLWLISISGVITIIVWMSICVSQFFFRKHYVADGGKL
EDLKFKTPLYPLVPMLGFGLYGIILISLIFIPEQRLGIYCTVPFIIFCYTYYHFKVKKRISTNTSSENKISETI
>Mature_473_residues
AQVNNTNNELKRTMKSRHLFMIALGGVIGTGLFNGSGFIISQAGPGGSVLAFMAGGLLMYFVMLCLGELAVAMPVSGSFQ
EYATKFINPATGFTIGWLYWLSWANTTGLEFTTAGITMQRWFPDIPVWVWCLIFGVTIFTINALSARSYAETEFWFSSIK
VSAIIAFIILGGAAMFGLIDLKGDEPAPLFSNFVNHGGLFPNGLAAILLTMVTVNYSFQGTELVGIAAGESEDPAKTLPR
SIRNIIWRTMFFFVLAIFVLVALIPWEEAGLTKSPFVAVFDNIGIPYAADIMNFVILTAVLSVANSGLYAATRMLWSLSK
NEMAPAFLKKLSSRGIPLNALIMTIAISAFSLLTSVVAAETVYLWLISISGVITIIVWMSICVSQFFFRKHYVADGGKLE
DLKFKTPLYPLVPMLGFGLYGIILISLIFIPEQRLGIYCTVPFIIFCYTYYHFKVKKRISTNTSSENKISETI

Specific function: Putative transport protein involved in arginine degradative pathway. Probably transports arginine or ornithine [H]

COG id: COG0833

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081708, Length=467, Percent_Identity=51.6059957173448, Blast_Score=495, Evalue=1e-141,
Organism=Escherichia coli, GI1788480, Length=416, Percent_Identity=46.3942307692308, Blast_Score=378, Evalue=1e-106,
Organism=Escherichia coli, GI1786789, Length=455, Percent_Identity=37.3626373626374, Blast_Score=306, Evalue=3e-84,
Organism=Escherichia coli, GI1789017, Length=455, Percent_Identity=38.021978021978, Blast_Score=293, Evalue=2e-80,
Organism=Escherichia coli, GI1786302, Length=457, Percent_Identity=34.1356673960613, Blast_Score=284, Evalue=8e-78,
Organism=Escherichia coli, GI48994972, Length=443, Percent_Identity=36.3431151241535, Blast_Score=283, Evalue=1e-77,
Organism=Escherichia coli, GI1786602, Length=466, Percent_Identity=34.9785407725322, Blast_Score=259, Evalue=3e-70,
Organism=Escherichia coli, GI87081915, Length=471, Percent_Identity=32.9087048832272, Blast_Score=257, Evalue=1e-69,
Organism=Escherichia coli, GI1790653, Length=460, Percent_Identity=32.8260869565217, Blast_Score=247, Evalue=1e-66,
Organism=Escherichia coli, GI87081869, Length=238, Percent_Identity=26.4705882352941, Blast_Score=73, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17540018, Length=453, Percent_Identity=23.841059602649, Blast_Score=65, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6320772, Length=441, Percent_Identity=35.1473922902494, Blast_Score=265, Evalue=1e-71,
Organism=Saccharomyces cerevisiae, GI6324061, Length=426, Percent_Identity=33.3333333333333, Blast_Score=246, Evalue=4e-66,
Organism=Saccharomyces cerevisiae, GI6324059, Length=425, Percent_Identity=33.6470588235294, Blast_Score=229, Evalue=6e-61,
Organism=Saccharomyces cerevisiae, GI6324553, Length=406, Percent_Identity=35.2216748768473, Blast_Score=228, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6322892, Length=412, Percent_Identity=35.1941747572816, Blast_Score=219, Evalue=5e-58,
Organism=Saccharomyces cerevisiae, GI6320717, Length=431, Percent_Identity=30.6264501160093, Blast_Score=213, Evalue=8e-56,
Organism=Saccharomyces cerevisiae, GI6319824, Length=422, Percent_Identity=31.042654028436, Blast_Score=212, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6321629, Length=487, Percent_Identity=30.3901437371663, Blast_Score=211, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6320251, Length=421, Percent_Identity=31.1163895486936, Blast_Score=199, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6324990, Length=447, Percent_Identity=29.7539149888143, Blast_Score=196, Evalue=7e-51,
Organism=Saccharomyces cerevisiae, GI6319543, Length=418, Percent_Identity=28.4688995215311, Blast_Score=195, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6324924, Length=488, Percent_Identity=28.6885245901639, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6319542, Length=424, Percent_Identity=30.6603773584906, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6321053, Length=419, Percent_Identity=28.8782816229117, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6322967, Length=454, Percent_Identity=30.8370044052863, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6324981, Length=501, Percent_Identity=29.5409181636727, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6319608, Length=452, Percent_Identity=24.5575221238938, Blast_Score=154, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6320364, Length=94, Percent_Identity=39.3617021276596, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 52117; Mature: 51986

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS00218 AMINO_ACID_PERMEASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVNNTNNELKRTMKSRHLFMIALGGVIGTGLFNGSGFIISQAGPGGSVLAFMAGGLLM
CCCCCCCHHHHHHHHHHCCEEEEEHHHHHHHCEECCCCEEEECCCCCCHHHHHHHHHHHH
YFVMLCLGELAVAMPVSGSFQEYATKFINPATGFTIGWLYWLSWANTTGLEFTTAGITMQ
HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCEEHH
RWFPDIPVWVWCLIFGVTIFTINALSARSYAETEFWFSSIKVSAIIAFIILGGAAMFGLI
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
DLKGDEPAPLFSNFVNHGGLFPNGLAAILLTMVTVNYSFQGTELVGIAAGESEDPAKTLP
EECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHH
RSIRNIIWRTMFFFVLAIFVLVALIPWEEAGLTKSPFVAVFDNIGIPYAADIMNFVILTA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH
VLSVANSGLYAATRMLWSLSKNEMAPAFLKKLSSRGIPLNALIMTIAISAFSLLTSVVAA
HHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ETVYLWLISISGVITIIVWMSICVSQFFFRKHYVADGGKLEDLKFKTPLYPLVPMLGFGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
YGIILISLIFIPEQRLGIYCTVPFIIFCYTYYHFKVKKRISTNTSSENKISETI
HHHHHHHHHHCCCHHCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC
>Mature Secondary Structure 
AQVNNTNNELKRTMKSRHLFMIALGGVIGTGLFNGSGFIISQAGPGGSVLAFMAGGLLM
CCCCCCHHHHHHHHHHCCEEEEEHHHHHHHCEECCCCEEEECCCCCCHHHHHHHHHHHH
YFVMLCLGELAVAMPVSGSFQEYATKFINPATGFTIGWLYWLSWANTTGLEFTTAGITMQ
HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCEEHH
RWFPDIPVWVWCLIFGVTIFTINALSARSYAETEFWFSSIKVSAIIAFIILGGAAMFGLI
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
DLKGDEPAPLFSNFVNHGGLFPNGLAAILLTMVTVNYSFQGTELVGIAAGESEDPAKTLP
EECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHH
RSIRNIIWRTMFFFVLAIFVLVALIPWEEAGLTKSPFVAVFDNIGIPYAADIMNFVILTA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH
VLSVANSGLYAATRMLWSLSKNEMAPAFLKKLSSRGIPLNALIMTIAISAFSLLTSVVAA
HHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ETVYLWLISISGVITIIVWMSICVSQFFFRKHYVADGGKLEDLKFKTPLYPLVPMLGFGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
YGIILISLIFIPEQRLGIYCTVPFIIFCYTYYHFKVKKRISTNTSSENKISETI
HHHHHHHHHHCCCHHCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]